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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G09500
Type: Protein GRN ID: np24634 Name:
Annotation: Ribosomal L29 family protein
Gene Locus: AT3G09500
Transcription factor /
transcriptional regulator:		 transcription factor family bHLH
Gene Expression (Affy ATH1 probeset): 258709_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360
3 AT3G09500  --  has similar expression pattern (mutual information value=1.18074) with  --  AT3G55750
4 AT3G09500  --  has similar expression pattern (mutual information value=1.18074) with  --  AT1G41880
5 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250
6 AT3G09500  --  has similar expression pattern (mutual information value=1.19235) with  --  RPL34
7 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430
8 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030
9 AT3G09500  --  has similar expression pattern (mutual information value=0.863722) with  --  RPS18C
10 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980
11 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G44010
12 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1
13 AT3G09500  --  has similar expression pattern (mutual information value=1.23906) with  --  AT3G53890
14 AT3G09500  --  has similar expression pattern (mutual information value=1.14202) with  --  AT3G56340
15 AT3G09500  --  has similar expression pattern (mutual information value=1.22918) with  --  AT3G60770
16 AT3G09500  --  has similar expression pattern (mutual information value=1.0284) with  --  ATTOM22-V; TOM22-V; TOM9-2
17 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.13269) with  --  RPL16A
18 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.91571) with  --  AT1G07830
19 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.00733) with  --  DECOY
20 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.04301) with  --  AT1G52930
21 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.837541) with  --  ATEIF3G1; EIF3G1
22 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.979291) with  --  AT3G13160
23 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.960639) with  --  AT3G18940
24 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.07691) with  --  EMB1080
25 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.981496) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1
26 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.8186) with  --  AT5G41970
27 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.16838) with  --  AT5G56940
28 AT3G09500  --  has similar expression pattern (mutual information value=1.1364) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.17944) with  --  AT5G27850
29 AT3G09500  --  has similar expression pattern (mutual information value=1.18074) with  --  AT3G55750  --  has similar expression pattern (mutual information value=1.17983) with  --  EMB2296
30 AT3G09500  --  has similar expression pattern (mutual information value=1.18074) with  --  AT3G55750  --  has similar expression pattern (mutual information value=1.17983) with  --  AT4G36130
31 AT3G09500  --  has similar expression pattern (mutual information value=1.18074) with  --  AT3G55750  --  has similar expression pattern (mutual information value=0.954087) with  --  HTB1
32 AT3G09500  --  has similar expression pattern (mutual information value=1.18074) with  --  AT3G55750  --  has similar expression pattern (mutual information value=1.05032) with  --  AT1G58983
33 AT3G09500  --  has similar expression pattern (mutual information value=1.18074) with  --  AT3G55750  --  has similar expression pattern (mutual information value=1.05032) with  --  AT1G59359
34 AT3G09500  --  has similar expression pattern (mutual information value=1.18074) with  --  AT3G55750  --  has similar expression pattern (mutual information value=1.05032) with  --  AT1G58684
35 AT3G09500  --  has similar expression pattern (mutual information value=1.18074) with  --  AT3G55750  --  has similar expression pattern (mutual information value=1.05032) with  --  XW6
36 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=0.948) with  --  AT2G44860
37 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=1.08517) with  --  RPL24A
38 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=1.03539) with  --  AT1G70600
39 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=1.03539) with  --  RPL27A; RPL27AB
40 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=1.14889) with  --  TOM6
41 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=1.04178) with  --  AT1G26740
42 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=1.04287) with  --  AT2G43460
43 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=0.956185) with  --  AT3G18760
44 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=1.01691) with  --  AT3G18740
45 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=0.994493) with  --  AT4G25740
46 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=1.20315) with  --  AT3G44590
47 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=0.948003) with  --  AT3G51010
48 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=0.995772) with  --  AT3G58700
49 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=1.04157) with  --  AT5G03850
50 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=0.852369) with  --  AT5G11340
51 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=1.10165) with  --  TIM8
52 AT3G09500  --  has similar expression pattern (mutual information value=1.0537) with  --  AT1G29250  --  has similar expression pattern (mutual information value=0.990711) with  --  AT2G39795
53 AT3G09500  --  has similar expression pattern (mutual information value=1.19235) with  --  RPL34  --  has similar expression pattern (mutual information value=0.800455) with  --  EMB161; EMB251; EMB2775; RFC3
54 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.984773) with  --  AT1G02870
55 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.895657) with  --  EMB2811; RFC2
56 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.831846) with  --  AT3G01740
57 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.857854) with  --  AT3G25545
58 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.963651) with  --  PBD1; PRCGB
59 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=1.09354) with  --  AT5G06360
60 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.893259) with  --  AT5G23900
61 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.922502) with  --  AT5G38650
62 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.992778) with  --  AT5G39850
63 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.838198) with  --  ARS5; ATPSM30; PAF1
64 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.840536) with  --  AT5G51510
65 AT3G09500  --  has similar expression pattern (mutual information value=0.871897) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.981913) with  --  AT4G15520
66 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  interacts with  --  LSU1
67 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=0.80231) with  --  AT2G31610
68 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.34691) with  --  AT3G10610
69 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.15163) with  --  AT3G22230
70 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.0117) with  --  EMB2167; ERD16; HAP4; UBQ1
71 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.34902) with  --  AT3G53430
72 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.1611) with  --  AT3G53740
73 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.07571) with  --  AT5G07090
74 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.15892) with  --  RPS11-BETA
75 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.0915) with  --  AT1G57860
76 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.0915) with  --  AT1G57660
77 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.06663) with  --  AT5G09510
78 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.46535) with  --  AT4G16720
79 AT3G09500  --  has similar expression pattern (mutual information value=1.1665) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.00779) with  --  AT4G14320
80 AT3G09500  --  has similar expression pattern (mutual information value=0.863722) with  --  RPS18C  --  has similar expression pattern (mutual information value=0.821233) with  --  EDA27; NOP10
81 AT3G09500  --  has similar expression pattern (mutual information value=0.863722) with  --  RPS18C  --  has similar expression pattern (mutual information value=0.979631) with  --  AT5G09770
82 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  interacts with  --  LSU2
83 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.839062) with  --  ATO1; TO1
84 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.37344) with  --  AT2G27720
85 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.866314) with  --  ATPAE1; PAE1
86 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.923212) with  --  AT3G09470
87 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.17748) with  --  AT4G29390
88 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.842936) with  --  AT3G47833
89 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.970314) with  --  PAD1
90 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.1748) with  --  TOM5
91 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.19415) with  --  AT5G18790
92 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.19415) with  --  AT3G06320
93 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.850223) with  --  AT5G18920
94 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.53528) with  --  AT5G47930
95 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.851838) with  --  AT5G27700
96 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.843512) with  --  U1A
97 AT3G09500  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G44010  --  interacts with  --  AT1G08590
98 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF11
99 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF7
100 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF6
101 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ATB2; AtbZIP11; BZIP11; GBF6
102 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF3; ARL1; ATARL1
103 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF5
104 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF2/ARF1-BP
105 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  interacts with  --  EMB3108
106 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.18385) with  --  AML1; ATRPS5A; RPS5A
107 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.1907) with  --  AT1G55890
108 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.37099) with  --  AT3G11250
109 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.890643) with  --  MEE49
110 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.25229) with  --  EMB3010; RPS6B
111 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.06087) with  --  AT5G49560
112 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.816853) with  --  AT5G27470
113 AT3G09500  --  has similar expression pattern (mutual information value=1.1716) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.900633) with  --  AT4G14000
114 AT3G09500  --  has similar expression pattern (mutual information value=1.23906) with  --  AT3G53890  --  interacts with  --  AT1G63480
115 AT3G09500  --  has similar expression pattern (mutual information value=1.23906) with  --  AT3G53890  --  interacts with  --  AP40; P40; RP40; RPSAA
116 AT3G09500  --  has similar expression pattern (mutual information value=1.23906) with  --  AT3G53890  --  has similar expression pattern (mutual information value=0.913999) with  --  AT4G02840
117 AT3G09500  --  has similar expression pattern (mutual information value=1.14202) with  --  AT3G56340  --  interacts with  --  AHL29; SOB3
118 AT3G09500  --  has similar expression pattern (mutual information value=1.14202) with  --  AT3G56340  --  has similar expression pattern (mutual information value=1.30002) with  --  AT2G05220
119 AT3G09500  --  has similar expression pattern (mutual information value=1.14202) with  --  AT3G56340  --  has similar expression pattern (mutual information value=1.30002) with  --  AT2G04390
120 AT3G09500  --  has similar expression pattern (mutual information value=1.22918) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.25083) with  --  AT3G07110
121 AT3G09500  --  has similar expression pattern (mutual information value=1.22918) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.22729) with  --  AT3G09680
122 AT3G09500  --  has similar expression pattern (mutual information value=1.22918) with  --  AT3G60770  --  has similar expression pattern (mutual information value=0.990245) with  --  AT3G12370
123 AT3G09500  --  has similar expression pattern (mutual information value=1.22918) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.13292) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1
124 AT3G09500  --  has similar expression pattern (mutual information value=1.22918) with  --  AT3G60770  --  has similar expression pattern (mutual information value=0.902326) with  --  RID3
125 AT3G09500  --  has similar expression pattern (mutual information value=1.22918) with  --  AT3G60770  --  has similar expression pattern (mutual information value=0.881966) with  --  RRP41
126 AT3G09500  --  has similar expression pattern (mutual information value=1.22918) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.20221) with  --  AT5G56670
127 AT3G09500  --  has similar expression pattern (mutual information value=1.0284) with  --  ATTOM22-V; TOM22-V; TOM9-2  --  has similar expression pattern (mutual information value=0.912758) with  --  ATTOC34; OEP34; TOC34
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