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Location:  Home > Details for node AT5G27470
Type: Protein GRN ID: np36962 Name:
Annotation: seryl-tRNA synthetase / serine--tRNA ligase [EC:6.1.1.11]
Gene Locus: AT5G27470
Gene Expression (Affy ATH1 probeset): 246780_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G27470  --  has product (in catalytic reaction)  --  L-Seryl-tRNA(Ser)
3 AT5G27470  --  has similar expression pattern (mutual information value=0.842505) with  --  AT4G10320
4 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1
5 AT5G27470  --  has similar expression pattern (mutual information value=0.829383) with  --  EMB3010; RPS6B
6 AT5G27470  --  has similar expression pattern (mutual information value=0.855301) with  --  AT5G27850
7 AT5G27470  --  has product (in catalytic reaction)  --  L-Seryl-tRNA(Ser)  --  is product (in catalytic reaction) of  --  tRNA(Ser)
8 AT5G27470  --  has similar expression pattern (mutual information value=0.842505) with  --  AT4G10320  --  has similar expression pattern (mutual information value=0.840123) with  --  AML1; ATRPS5A; RPS5A
9 AT5G27470  --  has similar expression pattern (mutual information value=0.842505) with  --  AT4G10320  --  has similar expression pattern (mutual information value=0.813685) with  --  AT3G10610
10 AT5G27470  --  has similar expression pattern (mutual information value=0.842505) with  --  AT4G10320  --  has similar expression pattern (mutual information value=0.82864) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1
11 AT5G27470  --  has similar expression pattern (mutual information value=0.842505) with  --  AT4G10320  --  has similar expression pattern (mutual information value=0.808883) with  --  DegP9
12 AT5G27470  --  has similar expression pattern (mutual information value=0.842505) with  --  AT4G10320  --  has product (in catalytic reaction)  --  L-Isoleucyl-tRNA(Ile)
13 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF11
14 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF7
15 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF6
16 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ATB2; AtbZIP11; BZIP11; GBF6
17 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF3; ARL1; ATARL1
18 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF5
19 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF2/ARF1-BP
20 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  interacts with  --  EMB3108
21 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.17388) with  --  AT2G27720
22 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.19739) with  --  EMB2296
23 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.19739) with  --  AT4G36130
24 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.27116) with  --  AT1G08360
25 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.35824) with  --  AT3G55750
26 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.35824) with  --  AT1G41880
27 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.1907) with  --  AT1G55890
28 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.03972) with  --  AT1G52930
29 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.808268) with  --  EMB2811; RFC2
30 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.903903) with  --  AT1G20430
31 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.1716) with  --  AT3G09500
32 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.05213) with  --  AT3G13160
33 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.37099) with  --  AT3G11250
34 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.890643) with  --  MEE49
35 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.15762) with  --  AT3G43980
36 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.15762) with  --  AT3G44010
37 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.11676) with  --  AT3G60770
38 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.18813) with  --  AT5G23900
39 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.06087) with  --  AT5G49560
40 AT5G27470  --  has similar expression pattern (mutual information value=0.816853) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.900633) with  --  AT4G14000
41 AT5G27470  --  has similar expression pattern (mutual information value=0.829383) with  --  EMB3010; RPS6B  --  interacts with  --  NAP1;3; NFA03; NFA3
42 AT5G27470  --  has similar expression pattern (mutual information value=0.829383) with  --  EMB3010; RPS6B  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
43 AT5G27470  --  has similar expression pattern (mutual information value=0.829383) with  --  EMB3010; RPS6B  --  interacts with  --  TGA1
44 AT5G27470  --  has similar expression pattern (mutual information value=0.829383) with  --  EMB3010; RPS6B  --  interacts with  --  ATNAP1;1; NAP1;1
45 AT5G27470  --  has similar expression pattern (mutual information value=0.829383) with  --  EMB3010; RPS6B  --  has similar expression pattern (mutual information value=1.02122) with  --  AT1G15930
46 AT5G27470  --  has similar expression pattern (mutual information value=0.829383) with  --  EMB3010; RPS6B  --  has similar expression pattern (mutual information value=1.08734) with  --  AT3G02560
47 AT5G27470  --  has similar expression pattern (mutual information value=0.855301) with  --  AT5G27850  --  interacts with  --  ATCDPK2/CPK11
48 AT5G27470  --  has similar expression pattern (mutual information value=0.855301) with  --  AT5G27850  --  has similar expression pattern (mutual information value=1.19268) with  --  AT5G22440
49 AT5G27470  --  has similar expression pattern (mutual information value=0.855301) with  --  AT5G27850  --  has similar expression pattern (mutual information value=0.825672) with  --  AT5G51590
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