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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G15520
Type: Protein GRN ID: np33845 Name:
Annotation: tRNA/rRNA methyltransferase (SpoU) family protein
Gene Locus: AT4G15520
Gene Expression (Affy ATH1 probeset): 245562_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430
3 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.984773) with  --  AT1G02870
4 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.923491) with  --  AT1G07830
5 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.905267) with  --  AT1G26740
6 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.895657) with  --  EMB2811; RFC2
7 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.831846) with  --  AT3G01740
8 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.871897) with  --  AT3G09500
9 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.857854) with  --  AT3G25545
10 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.963651) with  --  PBD1; PRCGB
11 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.914374) with  --  AT3G43980
12 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.914374) with  --  AT3G44010
13 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.964265) with  --  AT3G51010
14 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.903903) with  --  RPL24; RPL24B; STV1
15 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.904455) with  --  AT3G60770
16 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=1.09354) with  --  AT5G06360
17 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.893259) with  --  AT5G23900
18 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.922502) with  --  AT5G38650
19 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.992778) with  --  AT5G39850
20 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.838198) with  --  ARS5; ATPSM30; PAF1
21 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.840536) with  --  AT5G51510
22 AT4G15520  --  has similar expression pattern (mutual information value=0.981913) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.832726) with  --  AT5G56940
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