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Location:  Home > Details for node AT5G23900
Type: Protein GRN ID: np41949 Name:
Annotation: Ribosomal protein L13e family protein
Gene Locus: AT5G23900
Gene Expression (Affy ATH1 probeset): 249815_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G23900  --  has similar expression pattern (mutual information value=0.934172) with  --  RPL16A
3 AT5G23900  --  has similar expression pattern (mutual information value=0.829805) with  --  EDA27; NOP10
4 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430
5 AT5G23900  --  has similar expression pattern (mutual information value=0.837892) with  --  ATEIF3G1; EIF3G1
6 AT5G23900  --  has similar expression pattern (mutual information value=0.867197) with  --  AT3G02080
7 AT5G23900  --  has similar expression pattern (mutual information value=1.03371) with  --  AT3G02560
8 AT5G23900  --  has similar expression pattern (mutual information value=0.803263) with  --  RPS18C
9 AT5G23900  --  has similar expression pattern (mutual information value=0.907451) with  --  ATTIF3K1; EIF3K; TIF3K1
10 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1
11 AT5G23900  --  has similar expression pattern (mutual information value=0.902614) with  --  AT5G06360
12 AT5G23900  --  has similar expression pattern (mutual information value=1.09677) with  --  EMB3010; RPS6B
13 AT5G23900  --  has similar expression pattern (mutual information value=0.895504) with  --  AT5G27700
14 AT5G23900  --  has similar expression pattern (mutual information value=0.934172) with  --  RPL16A  --  has similar expression pattern (mutual information value=0.910879) with  --  AT2G42910
15 AT5G23900  --  has similar expression pattern (mutual information value=0.934172) with  --  RPL16A  --  has similar expression pattern (mutual information value=0.823279) with  --  AT2G36160
16 AT5G23900  --  has similar expression pattern (mutual information value=0.934172) with  --  RPL16A  --  has similar expression pattern (mutual information value=1.13269) with  --  AT1G08360
17 AT5G23900  --  has similar expression pattern (mutual information value=0.934172) with  --  RPL16A  --  has similar expression pattern (mutual information value=0.964441) with  --  AT1G52930
18 AT5G23900  --  has similar expression pattern (mutual information value=0.934172) with  --  RPL16A  --  has similar expression pattern (mutual information value=0.890333) with  --  AT3G60770
19 AT5G23900  --  has similar expression pattern (mutual information value=0.934172) with  --  RPL16A  --  has similar expression pattern (mutual information value=0.933995) with  --  ATRAN3; RAN3
20 AT5G23900  --  has similar expression pattern (mutual information value=0.934172) with  --  RPL16A  --  has similar expression pattern (mutual information value=1.07608) with  --  AT5G56940
21 AT5G23900  --  has similar expression pattern (mutual information value=0.829805) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=0.86709) with  --  RPS14
22 AT5G23900  --  has similar expression pattern (mutual information value=0.829805) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=0.888172) with  --  AT5G18380
23 AT5G23900  --  has similar expression pattern (mutual information value=0.829805) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=1.42596) with  --  AT1G02870
24 AT5G23900  --  has similar expression pattern (mutual information value=0.829805) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=0.956707) with  --  AT1G01100
25 AT5G23900  --  has similar expression pattern (mutual information value=0.829805) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=1.10863) with  --  AT1G26740
26 AT5G23900  --  has similar expression pattern (mutual information value=0.829805) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=0.829625) with  --  AT3G02220
27 AT5G23900  --  has similar expression pattern (mutual information value=0.829805) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=1.13843) with  --  AT3G01790
28 AT5G23900  --  has similar expression pattern (mutual information value=0.829805) with  --  EDA27; NOP10  --  has similar expression pattern (mutual information value=1.03851) with  --  AT5G47930
29 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.923491) with  --  AT1G07830
30 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.895657) with  --  EMB2811; RFC2
31 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.831846) with  --  AT3G01740
32 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.871897) with  --  AT3G09500
33 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.857854) with  --  AT3G25545
34 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.963651) with  --  PBD1; PRCGB
35 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.914374) with  --  AT3G43980
36 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.914374) with  --  AT3G44010
37 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.964265) with  --  AT3G51010
38 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.922502) with  --  AT5G38650
39 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.992778) with  --  AT5G39850
40 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.838198) with  --  ARS5; ATPSM30; PAF1
41 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.840536) with  --  AT5G51510
42 AT5G23900  --  has similar expression pattern (mutual information value=0.893259) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.981913) with  --  AT4G15520
43 AT5G23900  --  has similar expression pattern (mutual information value=0.837892) with  --  ATEIF3G1; EIF3G1  --  interacts with  --  PKP-ALPHA; PKP1
44 AT5G23900  --  has similar expression pattern (mutual information value=0.837892) with  --  ATEIF3G1; EIF3G1  --  interacts with  --  ATHSP23.6-MITO; HSP23.6-MITO
45 AT5G23900  --  has similar expression pattern (mutual information value=0.837892) with  --  ATEIF3G1; EIF3G1  --  interacts with  --  AT1G63480
46 AT5G23900  --  has similar expression pattern (mutual information value=0.837892) with  --  ATEIF3G1; EIF3G1  --  interacts with  --  GATA28; TIFY2A; ZML2
47 AT5G23900  --  has similar expression pattern (mutual information value=0.837892) with  --  ATEIF3G1; EIF3G1  --  interacts with  --  AJH2; CSN5; CSN5B
48 AT5G23900  --  has similar expression pattern (mutual information value=0.837892) with  --  ATEIF3G1; EIF3G1  --  interacts with  --  BRX
49 AT5G23900  --  has similar expression pattern (mutual information value=0.867197) with  --  AT3G02080  --  has similar expression pattern (mutual information value=0.800395) with  --  CLPP2; NCLPP7
50 AT5G23900  --  has similar expression pattern (mutual information value=1.03371) with  --  AT3G02560  --  has similar expression pattern (mutual information value=1.01672) with  --  AML1; ATRPS5A; RPS5A
51 AT5G23900  --  has similar expression pattern (mutual information value=1.03371) with  --  AT3G02560  --  has similar expression pattern (mutual information value=0.903368) with  --  emb2386
52 AT5G23900  --  has similar expression pattern (mutual information value=1.03371) with  --  AT3G02560  --  has similar expression pattern (mutual information value=0.957337) with  --  DECOY
53 AT5G23900  --  has similar expression pattern (mutual information value=1.03371) with  --  AT3G02560  --  has similar expression pattern (mutual information value=1.02138) with  --  AT3G14600
54 AT5G23900  --  has similar expression pattern (mutual information value=1.03371) with  --  AT3G02560  --  has similar expression pattern (mutual information value=0.993636) with  --  AT3G45030
55 AT5G23900  --  has similar expression pattern (mutual information value=1.03371) with  --  AT3G02560  --  has similar expression pattern (mutual information value=1.13099) with  --  AT5G19510
56 AT5G23900  --  has similar expression pattern (mutual information value=0.803263) with  --  RPS18C  --  interacts with  --  LSU1
57 AT5G23900  --  has similar expression pattern (mutual information value=0.803263) with  --  RPS18C  --  has similar expression pattern (mutual information value=0.979631) with  --  AT5G09770
58 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF11
59 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF7
60 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF6
61 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ATB2; AtbZIP11; BZIP11; GBF6
62 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF3; ARL1; ATARL1
63 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF5
64 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF2/ARF1-BP
65 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  interacts with  --  EMB3108
66 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.17388) with  --  AT2G27720
67 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.19739) with  --  AT4G36130
68 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.35824) with  --  AT3G55750
69 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.1907) with  --  AT1G55890
70 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.05213) with  --  AT3G13160
71 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.37099) with  --  AT3G11250
72 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.890643) with  --  MEE49
73 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.06087) with  --  AT5G49560
74 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.816853) with  --  AT5G27470
75 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.4526) with  --  AT5G27850
76 AT5G23900  --  has similar expression pattern (mutual information value=1.18813) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.900633) with  --  AT4G14000
77 AT5G23900  --  has similar expression pattern (mutual information value=0.902614) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.816554) with  --  AT1G15420
78 AT5G23900  --  has similar expression pattern (mutual information value=0.902614) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.812334) with  --  AT4G20020
79 AT5G23900  --  has similar expression pattern (mutual information value=0.902614) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.961865) with  --  AT3G58470
80 AT5G23900  --  has similar expression pattern (mutual information value=0.902614) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.850901) with  --  DIM1A
81 AT5G23900  --  has similar expression pattern (mutual information value=1.09677) with  --  EMB3010; RPS6B  --  interacts with  --  NAP1;3; NFA03; NFA3
82 AT5G23900  --  has similar expression pattern (mutual information value=1.09677) with  --  EMB3010; RPS6B  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
83 AT5G23900  --  has similar expression pattern (mutual information value=1.09677) with  --  EMB3010; RPS6B  --  interacts with  --  TGA1
84 AT5G23900  --  has similar expression pattern (mutual information value=1.09677) with  --  EMB3010; RPS6B  --  interacts with  --  ATNAP1;1; NAP1;1
85 AT5G23900  --  has similar expression pattern (mutual information value=1.09677) with  --  EMB3010; RPS6B  --  has similar expression pattern (mutual information value=1.02122) with  --  AT1G15930
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