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Location:  Home > Details for node AT4G02840
Type: Protein GRN ID: np35783 Name:
Annotation: Small nuclear ribonucleoprotein family protein
Gene Locus: AT4G02840
Gene Expression (Affy ATH1 probeset): 255458_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G02840  --  interacts with  --  smB
3 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890
4 AT4G02840  --  has similar expression pattern (mutual information value=0.836499) with  --  RPS11-BETA
5 AT4G02840  --  interacts with  --  smB  --  has similar expression pattern (mutual information value=0.883332) with  --  AT1G33120
6 AT4G02840  --  interacts with  --  smB  --  has similar expression pattern (mutual information value=0.883332) with  --  PGY2
7 AT4G02840  --  interacts with  --  smB  --  has similar expression pattern (mutual information value=0.8825) with  --  AP40; P40; RP40; RPSAA
8 AT4G02840  --  interacts with  --  smB  --  has similar expression pattern (mutual information value=0.880698) with  --  AT3G53430
9 AT4G02840  --  interacts with  --  smB  --  has similar expression pattern (mutual information value=0.853062) with  --  AT5G41520
10 AT4G02840  --  interacts with  --  smB  --  has similar expression pattern (mutual information value=0.83001) with  --  AT1G07930
11 AT4G02840  --  interacts with  --  smB  --  has similar expression pattern (mutual information value=0.83001) with  --  AT1G07920
12 AT4G02840  --  interacts with  --  smB  --  has similar expression pattern (mutual information value=0.83001) with  --  AT1G07940
13 AT4G02840  --  interacts with  --  smB  --  is the target gene of  --  ath-miR5648-3p
14 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890  --  interacts with  --  AT1G63480
15 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890  --  has similar expression pattern (mutual information value=0.900858) with  --  HTB1
16 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890  --  has similar expression pattern (mutual information value=1.24848) with  --  AT3G55750
17 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890  --  has similar expression pattern (mutual information value=1.24848) with  --  AT1G41880
18 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890  --  has similar expression pattern (mutual information value=1.23906) with  --  AT3G09500
19 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890  --  has similar expression pattern (mutual information value=1.12445) with  --  AT3G22230
20 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890  --  has similar expression pattern (mutual information value=1.2761) with  --  AT1G34030
21 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890  --  has similar expression pattern (mutual information value=1.49304) with  --  AT3G43980
22 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890  --  has similar expression pattern (mutual information value=1.49304) with  --  AT3G44010
23 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890  --  has similar expression pattern (mutual information value=1.02849) with  --  PAD1
24 AT4G02840  --  has similar expression pattern (mutual information value=0.913999) with  --  AT3G53890  --  has similar expression pattern (mutual information value=1.41059) with  --  AT3G56340
25 AT4G02840  --  has similar expression pattern (mutual information value=0.836499) with  --  RPS11-BETA  --  has similar expression pattern (mutual information value=0.902992) with  --  NDPK1
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