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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G07090
Type: Protein GRN ID: np38735 Name:
Annotation: Ribosomal protein S4 (RPS4A) family protein
Gene Locus: AT5G07090
Gene Expression (Affy ATH1 probeset): 250667_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660
3 AT5G07090  --  has similar expression pattern (mutual information value=0.889684) with  --  AT2G31610
4 AT5G07090  --  has similar expression pattern (mutual information value=0.826644) with  --  AT1G15930
5 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610
6 AT5G07090  --  has similar expression pattern (mutual information value=1.07571) with  --  AT1G34030
7 AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT4G18100
8 AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT5G46430
9 AT5G07090  --  has similar expression pattern (mutual information value=0.9629) with  --  EMB2167; ERD16; HAP4; UBQ1
10 AT5G07090  --  has similar expression pattern (mutual information value=1.08245) with  --  AT3G53740
11 AT5G07090  --  has similar expression pattern (mutual information value=0.954705) with  --  AT5G02870
12 AT5G07090  --  has similar expression pattern (mutual information value=1.0887) with  --  AT1G57860
13 AT5G07090  --  has similar expression pattern (mutual information value=1.0887) with  --  AT1G57660
14 AT5G07090  --  has similar expression pattern (mutual information value=1.01979) with  --  AT4G17390
15 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.907711) with  --  MSI02; MSI2; NFC02; NFC2
16 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.883533) with  --  ATORC4; ORC4
17 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.883109) with  --  AT1G44835
18 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.821639) with  --  AT1G15810
19 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=1.01409) with  --  HSP60-3A
20 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.978014) with  --  AT4G10480
21 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.824875) with  --  AT4G11120
22 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.922566) with  --  AT4G34555
23 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.919497) with  --  AT3G56120
24 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.810853) with  --  ATUBA2; UBA 2
25 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.960302) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2
26 AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.89486) with  --  AT5G26710
27 AT5G07090  --  has similar expression pattern (mutual information value=0.889684) with  --  AT2G31610  --  interacts with  --  AT5G12320
28 AT5G07090  --  has similar expression pattern (mutual information value=0.826644) with  --  AT1G15930  --  has similar expression pattern (mutual information value=1.02122) with  --  EMB3010; RPS6B
29 AT5G07090  --  has similar expression pattern (mutual information value=0.826644) with  --  AT1G15930  --  has similar expression pattern (mutual information value=0.946163) with  --  AT5G27850
30 AT5G07090  --  has similar expression pattern (mutual information value=0.826644) with  --  AT1G15930  --  has similar expression pattern (mutual information value=0.89912) with  --  AT5G15520
31 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=1.17805) with  --  PGY1
32 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=1.03513) with  --  AT1G27400
33 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=0.943401) with  --  AT1G52930
34 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=0.813685) with  --  AT4G10320
35 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=0.821588) with  --  AT4G33400
36 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=1.29907) with  --  EMB1080
37 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=0.963824) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1
38 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=1.04275) with  --  AT5G22440
39 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=1.01168) with  --  AT1G58983
40 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=1.01168) with  --  AT1G59359
41 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=1.01168) with  --  AT1G58684
42 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=1.01168) with  --  XW6
43 AT5G07090  --  has similar expression pattern (mutual information value=0.997048) with  --  AT3G10610  --  has similar expression pattern (mutual information value=1.21921) with  --  AT4G16720
44 AT5G07090  --  has similar expression pattern (mutual information value=1.07571) with  --  AT1G34030  --  interacts with  --  LSU1
45 AT5G07090  --  has similar expression pattern (mutual information value=1.07571) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.43007) with  --  AT2G27710
46 AT5G07090  --  has similar expression pattern (mutual information value=1.07571) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.27941) with  --  AT3G55750
47 AT5G07090  --  has similar expression pattern (mutual information value=1.07571) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.27941) with  --  AT1G41880
48 AT5G07090  --  has similar expression pattern (mutual information value=1.07571) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.1665) with  --  AT3G09500
49 AT5G07090  --  has similar expression pattern (mutual information value=1.07571) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.15163) with  --  AT3G22230
50 AT5G07090  --  has similar expression pattern (mutual information value=1.07571) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.34902) with  --  AT3G53430
51 AT5G07090  --  has similar expression pattern (mutual information value=1.07571) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.2761) with  --  AT3G53890
52 AT5G07090  --  has similar expression pattern (mutual information value=1.07571) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.48566) with  --  AT3G56340
53 AT5G07090  --  has similar expression pattern (mutual information value=1.07571) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.06663) with  --  AT5G09510
54 AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT4G18100  --  interacts with  --  TGA1
55 AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT4G18100  --  has similar expression pattern (mutual information value=0.86232) with  --  AT2G18400
56 AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT4G18100  --  has similar expression pattern (mutual information value=1.11276) with  --  AT3G16080
57 AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT4G18100  --  has similar expression pattern (mutual information value=1.07387) with  --  RPS15AD
58 AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT4G18100  --  has similar expression pattern (mutual information value=1.05116) with  --  AT3G60245
59 AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT4G18100  --  has similar expression pattern (mutual information value=0.965141) with  --  AT5G02450
60 AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT4G18100  --  has similar expression pattern (mutual information value=0.893568) with  --  ATRBP45A; RBP45A
61 AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT5G46430  --  interacts with  --  ARR5
62 AT5G07090  --  has similar expression pattern (mutual information value=0.9629) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  SDG18; SUVR2
63 AT5G07090  --  has similar expression pattern (mutual information value=0.9629) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  SDG13; SUVR1
64 AT5G07090  --  has similar expression pattern (mutual information value=0.9629) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  UBP16
65 AT5G07090  --  has similar expression pattern (mutual information value=0.9629) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  UBP15
66 AT5G07090  --  has similar expression pattern (mutual information value=0.9629) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  SDG31; SUVR4
67 AT5G07090  --  has similar expression pattern (mutual information value=0.9629) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ATCHIP; CHIP
68 AT5G07090  --  has similar expression pattern (mutual information value=0.9629) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ATELC; ELC
69 AT5G07090  --  has similar expression pattern (mutual information value=0.9629) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ARR14
70 AT5G07090  --  has similar expression pattern (mutual information value=0.9629) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ARR1
71 AT5G07090  --  has similar expression pattern (mutual information value=0.954705) with  --  AT5G02870  --  interacts with  --  AT5G22310
72 AT5G07090  --  has similar expression pattern (mutual information value=0.954705) with  --  AT5G02870  --  interacts with  --  AT5G58720
73 AT5G07090  --  has similar expression pattern (mutual information value=0.954705) with  --  AT5G02870  --  interacts with  --  ASIL1
74 AT5G07090  --  has similar expression pattern (mutual information value=0.954705) with  --  AT5G02870  --  interacts with  --  IAA11
75 AT5G07090  --  has similar expression pattern (mutual information value=0.954705) with  --  AT5G02870  --  has similar expression pattern (mutual information value=0.931718) with  --  AT2G44120
76 AT5G07090  --  has similar expression pattern (mutual information value=0.954705) with  --  AT5G02870  --  has similar expression pattern (mutual information value=0.870094) with  --  AML1; ATRPS5A; RPS5A
77 AT5G07090  --  has similar expression pattern (mutual information value=0.954705) with  --  AT5G02870  --  has similar expression pattern (mutual information value=0.828134) with  --  AT2G20740
78 AT5G07090  --  has similar expression pattern (mutual information value=0.954705) with  --  AT5G02870  --  has similar expression pattern (mutual information value=1.35406) with  --  RPS6; RPS6A
79 AT5G07090  --  has similar expression pattern (mutual information value=1.0887) with  --  AT1G57860  --  has similar expression pattern (mutual information value=1.12068) with  --  AT2G40510
80 AT5G07090  --  has similar expression pattern (mutual information value=1.0887) with  --  AT1G57860  --  has similar expression pattern (mutual information value=1.12068) with  --  AT2G40590
81 AT5G07090  --  has similar expression pattern (mutual information value=1.0887) with  --  AT1G57860  --  has similar expression pattern (mutual information value=1.01882) with  --  ROC2
82 AT5G07090  --  has similar expression pattern (mutual information value=1.0887) with  --  AT1G57860  --  has similar expression pattern (mutual information value=0.994854) with  --  AT5G47700
83 AT5G07090  --  has similar expression pattern (mutual information value=1.0887) with  --  AT1G57660  --  interacts with  --  ARD1; ATARD1
84 AT5G07090  --  has similar expression pattern (mutual information value=1.01979) with  --  AT4G17390  --  has similar expression pattern (mutual information value=1.02616) with  --  RPL24A
85 AT5G07090  --  has similar expression pattern (mutual information value=1.01979) with  --  AT4G17390  --  has similar expression pattern (mutual information value=1.05079) with  --  RPL18
86 AT5G07090  --  has similar expression pattern (mutual information value=1.01979) with  --  AT4G17390  --  has similar expression pattern (mutual information value=0.998756) with  --  AT5G03850
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