Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G56670
Type: Protein GRN ID: np39429 Name:
Annotation: Ribosomal protein S30 family protein
Gene Locus: AT5G56670
Gene Expression (Affy ATH1 probeset): 247968_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G56670  --  has similar expression pattern (mutual information value=1.12933) with  --  AT2G19750
3 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880
4 AT5G56670  --  has similar expression pattern (mutual information value=1.21285) with  --  AT2G21580
5 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395
6 AT5G56670  --  has similar expression pattern (mutual information value=0.98051) with  --  AT1G26750
7 AT5G56670  --  has similar expression pattern (mutual information value=1.33393) with  --  AT2G43460
8 AT5G56670  --  has similar expression pattern (mutual information value=1.05653) with  --  AT1G72170
9 AT5G56670  --  has similar expression pattern (mutual information value=1.14114) with  --  AT4G29390
10 AT5G56670  --  has similar expression pattern (mutual information value=1.21597) with  --  AT4G33865
11 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770
12 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8
13 AT5G56670  --  has similar expression pattern (mutual information value=1.20791) with  --  AT5G60670
14 AT5G56670  --  has similar expression pattern (mutual information value=1.8002) with  --  RPS28
15 AT5G56670  --  has similar expression pattern (mutual information value=1.12933) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.00699) with  --  ATRPL23A; RPL23A; RPL23AA
16 AT5G56670  --  has similar expression pattern (mutual information value=1.12933) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.02165) with  --  AT2G37990
17 AT5G56670  --  has similar expression pattern (mutual information value=1.12933) with  --  AT2G19750  --  has similar expression pattern (mutual information value=0.827975) with  --  AT2G11910
18 AT5G56670  --  has similar expression pattern (mutual information value=1.12933) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.06623) with  --  AT3G06680
19 AT5G56670  --  has similar expression pattern (mutual information value=1.12933) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.01097) with  --  AT3G22230
20 AT5G56670  --  has similar expression pattern (mutual information value=1.12933) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.12501) with  --  ROC2
21 AT5G56670  --  has similar expression pattern (mutual information value=1.12933) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.38618) with  --  AT5G59850
22 AT5G56670  --  has similar expression pattern (mutual information value=1.12933) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.09968) with  --  AT5G09510
23 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  interacts with  --  AHL29; SOB3
24 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.19317) with  --  AT2G27710
25 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.40094) with  --  AT1G70600
26 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.40094) with  --  RPL27A; RPL27AB
27 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.194) with  --  AT1G01100
28 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.25705) with  --  AT3G07110
29 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=0.944632) with  --  AT3G13230
30 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=0.889197) with  --  AT4G13720
31 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.05834) with  --  AT3G45030
32 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.2123) with  --  AT3G53430
33 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.02787) with  --  AT5G02610
34 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.44728) with  --  AT2G05220
35 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.44728) with  --  AT5G04800
36 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.44728) with  --  AT2G04390
37 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.38556) with  --  AT5G47930
38 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.29401) with  --  AT5G61170
39 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.21882) with  --  AT5G16130
40 AT5G56670  --  has similar expression pattern (mutual information value=1.21388) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.03623) with  --  AT4G36420
41 AT5G56670  --  has similar expression pattern (mutual information value=1.21285) with  --  AT2G21580  --  interacts with  --  TGA1
42 AT5G56670  --  has similar expression pattern (mutual information value=1.21285) with  --  AT2G21580  --  has similar expression pattern (mutual information value=1.30905) with  --  RPL24A
43 AT5G56670  --  has similar expression pattern (mutual information value=1.21285) with  --  AT2G21580  --  has similar expression pattern (mutual information value=1.19367) with  --  AT1G77940
44 AT5G56670  --  has similar expression pattern (mutual information value=1.21285) with  --  AT2G21580  --  has similar expression pattern (mutual information value=1.04643) with  --  AT1G80750
45 AT5G56670  --  has similar expression pattern (mutual information value=1.21285) with  --  AT2G21580  --  has similar expression pattern (mutual information value=1.152) with  --  AT3G09680
46 AT5G56670  --  has similar expression pattern (mutual information value=1.21285) with  --  AT2G21580  --  has similar expression pattern (mutual information value=1.152) with  --  AT5G02960
47 AT5G56670  --  has similar expression pattern (mutual information value=1.21285) with  --  AT2G21580  --  has similar expression pattern (mutual information value=0.941798) with  --  AT3G12370
48 AT5G56670  --  has similar expression pattern (mutual information value=1.21285) with  --  AT2G21580  --  has similar expression pattern (mutual information value=0.97885) with  --  AT3G49080
49 AT5G56670  --  has similar expression pattern (mutual information value=1.21285) with  --  AT2G21580  --  has similar expression pattern (mutual information value=1.06234) with  --  AT5G02450
50 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.44561) with  --  AT2G45710
51 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.26766) with  --  AT2G27775
52 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.10056) with  --  AT2G15000
53 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.37713) with  --  AT2G35790
54 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.32591) with  --  NFD6
55 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.28398) with  --  TOM6
56 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.931244) with  --  ATWHY2; WHY2
57 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.14326) with  --  RPS10
58 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.9865) with  --  AT3G15460
59 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.04207) with  --  AT3G23620
60 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.988054) with  --  AT3G25120
61 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.995613) with  --  AT3G20240
62 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.39896) with  --  AT4G12600
63 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.12679) with  --  AT4G32605
64 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.07965) with  --  AT4G37660
65 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.873356) with  --  AT3G59840
66 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.03972) with  --  AT5G47455
67 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.45142) with  --  AT5G20160
68 AT5G56670  --  has similar expression pattern (mutual information value=1.10987) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.90701) with  --  U1A
69 AT5G56670  --  has similar expression pattern (mutual information value=0.98051) with  --  AT1G26750  --  has similar expression pattern (mutual information value=0.93749) with  --  AT1G26740
70 AT5G56670  --  has similar expression pattern (mutual information value=0.98051) with  --  AT1G26750  --  has similar expression pattern (mutual information value=0.877382) with  --  AT3G18760
71 AT5G56670  --  has similar expression pattern (mutual information value=1.33393) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.04287) with  --  AT1G29250
72 AT5G56670  --  has similar expression pattern (mutual information value=1.33393) with  --  AT2G43460  --  has similar expression pattern (mutual information value=0.961392) with  --  AT1G74270
73 AT5G56670  --  has similar expression pattern (mutual information value=1.33393) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.12115) with  --  AT3G43980
74 AT5G56670  --  has similar expression pattern (mutual information value=1.33393) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.12115) with  --  AT3G44010
75 AT5G56670  --  has similar expression pattern (mutual information value=1.05653) with  --  AT1G72170  --  interacts with  --  AT3G10260
76 AT5G56670  --  has similar expression pattern (mutual information value=1.05653) with  --  AT1G72170  --  has similar expression pattern (mutual information value=1.12112) with  --  AT2G23940
77 AT5G56670  --  has similar expression pattern (mutual information value=1.05653) with  --  AT1G72170  --  has similar expression pattern (mutual information value=0.952097) with  --  AT3G47833
78 AT5G56670  --  has similar expression pattern (mutual information value=1.14114) with  --  AT4G29390  --  has similar expression pattern (mutual information value=0.870513) with  --  DECOY
79 AT5G56670  --  has similar expression pattern (mutual information value=1.14114) with  --  AT4G29390  --  has similar expression pattern (mutual information value=1.17767) with  --  AT3G44590
80 AT5G56670  --  has similar expression pattern (mutual information value=1.14114) with  --  AT4G29390  --  has similar expression pattern (mutual information value=1.21773) with  --  EMB1080
81 AT5G56670  --  has similar expression pattern (mutual information value=1.14114) with  --  AT4G29390  --  has similar expression pattern (mutual information value=0.853702) with  --  AT5G11340
82 AT5G56670  --  has similar expression pattern (mutual information value=1.14114) with  --  AT4G29390  --  has similar expression pattern (mutual information value=0.984209) with  --  ATRBP45A; RBP45A
83 AT5G56670  --  has similar expression pattern (mutual information value=1.21597) with  --  AT4G33865  --  has similar expression pattern (mutual information value=0.816339) with  --  AT3G02190
84 AT5G56670  --  has similar expression pattern (mutual information value=1.21597) with  --  AT4G33865  --  has similar expression pattern (mutual information value=0.885842) with  --  AT3G09470
85 AT5G56670  --  has similar expression pattern (mutual information value=1.21597) with  --  AT4G33865  --  has similar expression pattern (mutual information value=1.01812) with  --  AT5G03850
86 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.28687) with  --  EMB2296
87 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.28687) with  --  AT4G36130
88 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=0.890333) with  --  RPL16A
89 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.02197) with  --  AT1G52930
90 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=0.904455) with  --  AT1G20430
91 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.22918) with  --  AT3G09500
92 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.13292) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1
93 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.12665) with  --  AT4G25740
94 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=0.902326) with  --  RID3
95 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.11676) with  --  RPL24; RPL24B; STV1
96 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=0.881966) with  --  RRP41
97 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.23218) with  --  AT5G18790
98 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.23218) with  --  AT3G06320
99 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=0.929642) with  --  AT5G39850
100 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.04622) with  --  ATTOM22-V; TOM22-V; TOM9-2
101 AT5G56670  --  has similar expression pattern (mutual information value=1.20221) with  --  AT3G60770  --  has similar expression pattern (mutual information value=0.951729) with  --  AT5G56940
102 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=0.913349) with  --  AT2G44860
103 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=0.800429) with  --  AT2G19740
104 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=0.929693) with  --  TIM10
105 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=0.822349) with  --  ATPHB6; PHB6
106 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=0.822349) with  --  ATPHB1; PHB1
107 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=1.00724) with  --  AT3G05560
108 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=0.951327) with  --  AT3G25940
109 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=1.03095) with  --  AT1G07070
110 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=0.951584) with  --  RUXF
111 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=0.880692) with  --  AT3G55605
112 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=1.06063) with  --  AT3G58700
113 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  has similar expression pattern (mutual information value=0.832345) with  --  AT5G61220
114 AT5G56670  --  has similar expression pattern (mutual information value=0.92969) with  --  TIM8  --  interacts with  --  AJH2; CSN5; CSN5B
115 AT5G56670  --  has similar expression pattern (mutual information value=1.20791) with  --  AT5G60670  --  has similar expression pattern (mutual information value=1.09828) with  --  RACK1B; RACK1B_AT
116 AT5G56670  --  has similar expression pattern (mutual information value=1.20791) with  --  AT5G60670  --  has similar expression pattern (mutual information value=0.866077) with  --  AT3G57490
117 AT5G56670  --  has similar expression pattern (mutual information value=1.20791) with  --  AT5G60670  --  has similar expression pattern (mutual information value=1.29283) with  --  AT5G58420
118 AT5G56670  --  has similar expression pattern (mutual information value=1.8002) with  --  RPS28  --  interacts with  --  ATSYP23; SYP23
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact