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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G53430
Type: Protein GRN ID: np28143 Name:
Annotation: Ribosomal protein L11 family protein
Gene Locus: AT3G53430
Gene Expression (Affy ATH1 probeset): 251938_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G53430  --  has similar expression pattern (mutual information value=1.41108) with  --  AT2G27710
3 AT3G53430  --  has similar expression pattern (mutual information value=1.2123) with  --  AT1G26880
4 AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  AT1G70600
5 AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  RPL27A; RPL27AB
6 AT3G53430  --  has similar expression pattern (mutual information value=1.10146) with  --  emb2386
7 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56
8 AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  AT1G33120
9 AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  PGY2
10 AT3G53430  --  has similar expression pattern (mutual information value=0.904201) with  --  AT1G74050
11 AT3G53430  --  has similar expression pattern (mutual information value=0.894797) with  --  NRP1
12 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030
13 AT3G53430  --  has similar expression pattern (mutual information value=1.1905) with  --  AT4G00810
14 AT3G53430  --  has similar expression pattern (mutual information value=1.22225) with  --  AT4G10450
15 AT3G53430  --  has similar expression pattern (mutual information value=1.27455) with  --  AT5G45775
16 AT3G53430  --  has similar expression pattern (mutual information value=0.880698) with  --  smB
17 AT3G53430  --  has similar expression pattern (mutual information value=0.876764) with  --  AT4G39880
18 AT3G53430  --  has similar expression pattern (mutual information value=1.37059) with  --  AT3G56340
19 AT3G53430  --  has similar expression pattern (mutual information value=1.18919) with  --  AT2G05220
20 AT3G53430  --  has similar expression pattern (mutual information value=1.18919) with  --  AT5G04800
21 AT3G53430  --  has similar expression pattern (mutual information value=1.18919) with  --  AT2G04390
22 AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  AT1G58983
23 AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  AT1G59359
24 AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  AT1G58684
25 AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  XW6
26 AT3G53430  --  has similar expression pattern (mutual information value=1.41108) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.36054) with  --  ATRPL23A; RPL23A; RPL23AA
27 AT3G53430  --  has similar expression pattern (mutual information value=1.41108) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.14158) with  --  AT1G27400
28 AT3G53430  --  has similar expression pattern (mutual information value=1.41108) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.39155) with  --  AT3G04840
29 AT3G53430  --  has similar expression pattern (mutual information value=1.41108) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.36741) with  --  AT3G07110
30 AT3G53430  --  has similar expression pattern (mutual information value=1.41108) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.10519) with  --  AT3G22230
31 AT3G53430  --  has similar expression pattern (mutual information value=1.41108) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.05375) with  --  AT3G45030
32 AT3G53430  --  has similar expression pattern (mutual information value=1.41108) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.46308) with  --  AT5G61170
33 AT3G53430  --  has similar expression pattern (mutual information value=1.41108) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.51877) with  --  AT5G16130
34 AT3G53430  --  has similar expression pattern (mutual information value=1.41108) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.06059) with  --  AT5G09510
35 AT3G53430  --  has similar expression pattern (mutual information value=1.2123) with  --  AT1G26880  --  interacts with  --  AHL29; SOB3
36 AT3G53430  --  has similar expression pattern (mutual information value=1.2123) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.05101) with  --  AT2G19750
37 AT3G53430  --  has similar expression pattern (mutual information value=1.2123) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.03638) with  --  AT1G26750
38 AT3G53430  --  has similar expression pattern (mutual information value=1.2123) with  --  AT1G26880  --  has similar expression pattern (mutual information value=0.944632) with  --  AT3G13230
39 AT3G53430  --  has similar expression pattern (mutual information value=1.2123) with  --  AT1G26880  --  has similar expression pattern (mutual information value=0.889197) with  --  AT4G13720
40 AT3G53430  --  has similar expression pattern (mutual information value=1.2123) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.02787) with  --  AT5G02610
41 AT3G53430  --  has similar expression pattern (mutual information value=1.2123) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.38556) with  --  AT5G47930
42 AT3G53430  --  has similar expression pattern (mutual information value=1.2123) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.21388) with  --  AT5G56670
43 AT3G53430  --  has similar expression pattern (mutual information value=1.2123) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.03623) with  --  AT4G36420
44 AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  AT1G70600  --  has similar expression pattern (mutual information value=1.05079) with  --  PGY1
45 AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  AT1G70600  --  has similar expression pattern (mutual information value=1.21676) with  --  RPL24A
46 AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  AT1G70600  --  has similar expression pattern (mutual information value=1.03539) with  --  AT1G29250
47 AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  AT1G70600  --  has similar expression pattern (mutual information value=1.08485) with  --  AT2G43460
48 AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  AT1G70600  --  has similar expression pattern (mutual information value=1.01727) with  --  AT1G52930
49 AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  AT1G70600  --  has similar expression pattern (mutual information value=1.18508) with  --  emb2171
50 AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  AT1G70600  --  has similar expression pattern (mutual information value=1.22778) with  --  AT3G60770
51 AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  AT1G70600  --  has similar expression pattern (mutual information value=1.10535) with  --  AT4G16720
52 AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  RPL27A; RPL27AB  --  interacts with  --  NAPRT2
53 AT3G53430  --  has similar expression pattern (mutual information value=1.10146) with  --  emb2386  --  interacts with  --  TGA1
54 AT3G53430  --  has similar expression pattern (mutual information value=1.10146) with  --  emb2386  --  has similar expression pattern (mutual information value=0.903368) with  --  AT3G02560
55 AT3G53430  --  has similar expression pattern (mutual information value=1.10146) with  --  emb2386  --  has similar expression pattern (mutual information value=0.870423) with  --  ATL5; OLI5; PGY3; RPL5A
56 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=1.1708) with  --  EMB2762
57 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=1.10677) with  --  AT1G80750
58 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=1.08533) with  --  AP40; P40; RP40; RPSAA
59 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=0.87972) with  --  AT1G63810
60 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=0.965291) with  --  RPSAb
61 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=0.976785) with  --  AT3G21540
62 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=1.22542) with  --  ATPURM; EMB2818; PUR5
63 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=1.34444) with  --  ROC2
64 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=1.1921) with  --  AT5G52650
65 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=1.22107) with  --  AT5G15810
66 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=1.37701) with  --  ATEBP1; ATG2; EBP1
67 AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56  --  has similar expression pattern (mutual information value=1.09543) with  --  AT4G15640
68 AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  AT1G33120  --  has similar expression pattern (mutual information value=0.927729) with  --  UBQ5
69 AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  AT1G33120  --  has similar expression pattern (mutual information value=0.927729) with  --  UBQ6
70 AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  AT1G33120  --  has similar expression pattern (mutual information value=0.975152) with  --  AT1G30580
71 AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  AT1G33120  --  has similar expression pattern (mutual information value=1.16542) with  --  ARS27A; RS27A
72 AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  AT1G33120  --  has similar expression pattern (mutual information value=1.18397) with  --  AT5G48760
73 AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  AT1G33120  --  has similar expression pattern (mutual information value=1.01749) with  --  AT5G67510
74 AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  AT1G33120  --  is the target gene of  --  ath-miR5630b
75 AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  AT1G33120  --  is the target gene of  --  ath-miR5630a
76 AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  PGY2  --  interacts with  --  AHK2
77 AT3G53430  --  has similar expression pattern (mutual information value=0.904201) with  --  AT1G74050  --  has similar expression pattern (mutual information value=1.00213) with  --  AT1G73230
78 AT3G53430  --  has similar expression pattern (mutual information value=0.894797) with  --  NRP1  --  interacts with  --  VPS9B
79 AT3G53430  --  has similar expression pattern (mutual information value=0.894797) with  --  NRP1  --  has similar expression pattern (mutual information value=0.804193) with  --  AT2G11910
80 AT3G53430  --  has similar expression pattern (mutual information value=0.894797) with  --  NRP1  --  has similar expression pattern (mutual information value=1.01303) with  --  ATWHY2; WHY2
81 AT3G53430  --  has similar expression pattern (mutual information value=0.894797) with  --  NRP1  --  has similar expression pattern (mutual information value=0.84858) with  --  NDPK1
82 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  interacts with  --  LSU1
83 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=0.80231) with  --  AT2G31610
84 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.27941) with  --  AT3G55750
85 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.34691) with  --  AT3G10610
86 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.1665) with  --  AT3G09500
87 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.33719) with  --  EMB1080
88 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.0117) with  --  EMB2167; ERD16; HAP4; UBQ1
89 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.1611) with  --  AT3G53740
90 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.2761) with  --  AT3G53890
91 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.07571) with  --  AT5G07090
92 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.15892) with  --  RPS11-BETA
93 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.0915) with  --  AT1G57860
94 AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.00779) with  --  AT4G14320
95 AT3G53430  --  has similar expression pattern (mutual information value=1.1905) with  --  AT4G00810  --  has similar expression pattern (mutual information value=1.1118) with  --  AT4G13170
96 AT3G53430  --  has similar expression pattern (mutual information value=1.22225) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.862254) with  --  AT2G42710
97 AT3G53430  --  has similar expression pattern (mutual information value=1.22225) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.808364) with  --  ATRH53; PMH2
98 AT3G53430  --  has similar expression pattern (mutual information value=1.22225) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.808364) with  --  ATRH9; PMH1
99 AT3G53430  --  has similar expression pattern (mutual information value=1.22225) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.983009) with  --  ATGRP2; GR-RBP2; GRP2
100 AT3G53430  --  has similar expression pattern (mutual information value=1.22225) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.993136) with  --  HAP6
101 AT3G53430  --  has similar expression pattern (mutual information value=1.22225) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.813169) with  --  AT4G28360
102 AT3G53430  --  has similar expression pattern (mutual information value=1.22225) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.813169) with  --  AT1G52370
103 AT3G53430  --  has similar expression pattern (mutual information value=1.22225) with  --  AT4G10450  --  has similar expression pattern (mutual information value=1.11484) with  --  AT5G41520
104 AT3G53430  --  has similar expression pattern (mutual information value=1.27455) with  --  AT5G45775  --  has similar expression pattern (mutual information value=1.1082) with  --  AT5G18380
105 AT3G53430  --  has similar expression pattern (mutual information value=1.27455) with  --  AT5G45775  --  has similar expression pattern (mutual information value=0.868447) with  --  AT1G07930
106 AT3G53430  --  has similar expression pattern (mutual information value=1.27455) with  --  AT5G45775  --  has similar expression pattern (mutual information value=0.868447) with  --  AT1G07920
107 AT3G53430  --  has similar expression pattern (mutual information value=1.27455) with  --  AT5G45775  --  has similar expression pattern (mutual information value=0.868447) with  --  AT1G07940
108 AT3G53430  --  has similar expression pattern (mutual information value=0.880698) with  --  smB  --  interacts with  --  AT5G62290
109 AT3G53430  --  has similar expression pattern (mutual information value=0.880698) with  --  smB  --  interacts with  --  AT4G02840
110 AT3G53430  --  has similar expression pattern (mutual information value=0.880698) with  --  smB  --  is the target gene of  --  ath-miR5648-3p
111 AT3G53430  --  has similar expression pattern (mutual information value=0.876764) with  --  AT4G39880  --  has similar expression pattern (mutual information value=0.853365) with  --  TOM20-2
112 AT3G53430  --  has similar expression pattern (mutual information value=1.18919) with  --  AT2G05220  --  has similar expression pattern (mutual information value=1.13518) with  --  AT3G09680
113 AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  AT1G58983  --  interacts with  --  AT4G02220
114 AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  AT1G58983  --  has similar expression pattern (mutual information value=1.05943) with  --  AT1G55890
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