Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G31610
Type: Protein GRN ID: np19184 Name:
Annotation: Ribosomal protein S3 family protein
Gene Locus: AT2G31610
Gene Expression (Affy ATH1 probeset): 263400_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G31610  --  interacts with  --  AT5G12320
3 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030
4 AT2G31610  --  has similar expression pattern (mutual information value=0.875263) with  --  EMB2167; ERD16; HAP4; UBQ1
5 AT2G31610  --  has similar expression pattern (mutual information value=1.0097) with  --  AT5G02870
6 AT2G31610  --  has similar expression pattern (mutual information value=0.889684) with  --  AT5G07090
7 AT2G31610  --  has similar expression pattern (mutual information value=0.835391) with  --  AT1G57860
8 AT2G31610  --  has similar expression pattern (mutual information value=0.835391) with  --  AT1G57660
9 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  interacts with  --  LSU1
10 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.43007) with  --  AT2G27710
11 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.27941) with  --  AT3G55750
12 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.27941) with  --  AT1G41880
13 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.34691) with  --  AT3G10610
14 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.1665) with  --  AT3G09500
15 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.15163) with  --  AT3G22230
16 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.33719) with  --  EMB1080
17 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.34902) with  --  AT3G53430
18 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.1611) with  --  AT3G53740
19 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.2761) with  --  AT3G53890
20 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.48566) with  --  AT3G56340
21 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.09647) with  --  AT5G22440
22 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.15892) with  --  RPS11-BETA
23 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.06663) with  --  AT5G09510
24 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.46535) with  --  AT4G16720
25 AT2G31610  --  has similar expression pattern (mutual information value=0.80231) with  --  AT1G34030  --  has similar expression pattern (mutual information value=1.00779) with  --  AT4G14320
26 AT2G31610  --  has similar expression pattern (mutual information value=0.875263) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  SDG18; SUVR2
27 AT2G31610  --  has similar expression pattern (mutual information value=0.875263) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  SDG13; SUVR1
28 AT2G31610  --  has similar expression pattern (mutual information value=0.875263) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  UBP16
29 AT2G31610  --  has similar expression pattern (mutual information value=0.875263) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  UBP15
30 AT2G31610  --  has similar expression pattern (mutual information value=0.875263) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  SDG31; SUVR4
31 AT2G31610  --  has similar expression pattern (mutual information value=0.875263) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ATCHIP; CHIP
32 AT2G31610  --  has similar expression pattern (mutual information value=0.875263) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ATELC; ELC
33 AT2G31610  --  has similar expression pattern (mutual information value=0.875263) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ARR14
34 AT2G31610  --  has similar expression pattern (mutual information value=0.875263) with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ARR1
35 AT2G31610  --  has similar expression pattern (mutual information value=1.0097) with  --  AT5G02870  --  interacts with  --  AT5G22310
36 AT2G31610  --  has similar expression pattern (mutual information value=1.0097) with  --  AT5G02870  --  interacts with  --  AT5G58720
37 AT2G31610  --  has similar expression pattern (mutual information value=1.0097) with  --  AT5G02870  --  interacts with  --  ASIL1
38 AT2G31610  --  has similar expression pattern (mutual information value=1.0097) with  --  AT5G02870  --  interacts with  --  IAA11
39 AT2G31610  --  has similar expression pattern (mutual information value=1.0097) with  --  AT5G02870  --  has similar expression pattern (mutual information value=0.931718) with  --  AT2G44120
40 AT2G31610  --  has similar expression pattern (mutual information value=1.0097) with  --  AT5G02870  --  has similar expression pattern (mutual information value=0.870094) with  --  AML1; ATRPS5A; RPS5A
41 AT2G31610  --  has similar expression pattern (mutual information value=1.0097) with  --  AT5G02870  --  has similar expression pattern (mutual information value=0.828134) with  --  AT2G20740
42 AT2G31610  --  has similar expression pattern (mutual information value=1.0097) with  --  AT5G02870  --  has similar expression pattern (mutual information value=1.04186) with  --  AT3G23940
43 AT2G31610  --  has similar expression pattern (mutual information value=1.0097) with  --  AT5G02870  --  has similar expression pattern (mutual information value=1.35406) with  --  RPS6; RPS6A
44 AT2G31610  --  has similar expression pattern (mutual information value=0.889684) with  --  AT5G07090  --  has similar expression pattern (mutual information value=0.812999) with  --  AT2G40660
45 AT2G31610  --  has similar expression pattern (mutual information value=0.889684) with  --  AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT4G18100
46 AT2G31610  --  has similar expression pattern (mutual information value=0.889684) with  --  AT5G07090  --  has similar expression pattern (mutual information value=0.982748) with  --  AT5G46430
47 AT2G31610  --  has similar expression pattern (mutual information value=0.835391) with  --  AT1G57860  --  has similar expression pattern (mutual information value=1.14829) with  --  AT3G23390
48 AT2G31610  --  has similar expression pattern (mutual information value=0.835391) with  --  AT1G57860  --  has similar expression pattern (mutual information value=1.12068) with  --  AT2G40510
49 AT2G31610  --  has similar expression pattern (mutual information value=0.835391) with  --  AT1G57860  --  has similar expression pattern (mutual information value=1.12068) with  --  AT2G40590
50 AT2G31610  --  has similar expression pattern (mutual information value=0.835391) with  --  AT1G57860  --  has similar expression pattern (mutual information value=1.01882) with  --  ROC2
51 AT2G31610  --  has similar expression pattern (mutual information value=0.835391) with  --  AT1G57860  --  has similar expression pattern (mutual information value=0.994854) with  --  AT5G47700
52 AT2G31610  --  has similar expression pattern (mutual information value=0.835391) with  --  AT1G57660  --  interacts with  --  ARD1; ATARD1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact