Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G27720
Type: Protein GRN ID: np23770 Name:
Annotation: 60S acidic ribosomal protein family
Gene Locus: AT2G27720
Gene Expression (Affy ATH1 probeset): 266258_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G27720  --  is modified by  --  SNRK2-8; SNRK2.8; SRK2C
3 AT2G27720  --  has similar expression pattern (mutual information value=0.815744) with  --  ATO1; TO1
4 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296
5 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  AT4G36130
6 AT2G27720  --  has similar expression pattern (mutual information value=1.47173) with  --  AT1G67430
7 AT2G27720  --  has similar expression pattern (mutual information value=1.43403) with  --  RPS15
8 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110
9 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980
10 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G44010
11 AT2G27720  --  has similar expression pattern (mutual information value=0.833653) with  --  AT3G47833
12 AT2G27720  --  has similar expression pattern (mutual information value=0.967033) with  --  PAD1
13 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1
14 AT2G27720  --  has similar expression pattern (mutual information value=1.24562) with  --  AT3G56340
15 AT2G27720  --  has similar expression pattern (mutual information value=1.11074) with  --  AT5G03850
16 AT2G27720  --  has similar expression pattern (mutual information value=1.51243) with  --  AT5G47930
17 AT2G27720  --  is modified by  --  SNRK2-8; SNRK2.8; SRK2C  --  interacts with  --  AT5G21326
18 AT2G27720  --  is modified by  --  SNRK2-8; SNRK2.8; SRK2C  --  modify  --  ANAC062; NAC062; NTL6
19 AT2G27720  --  is modified by  --  SNRK2-8; SNRK2.8; SRK2C  --  modify  --  EMB3119
20 AT2G27720  --  is modified by  --  SNRK2-8; SNRK2.8; SRK2C  --  modify  --  AK1
21 AT2G27720  --  is modified by  --  SNRK2-8; SNRK2.8; SRK2C  --  modify  --  ATGLX1; GLX1
22 AT2G27720  --  is modified by  --  SNRK2-8; SNRK2.8; SRK2C  --  modify  --  GRF3; RCI1
23 AT2G27720  --  is modified by  --  SNRK2-8; SNRK2.8; SRK2C  --  modify  --  GF14 CHI; GRF1
24 AT2G27720  --  is modified by  --  SNRK2-8; SNRK2.8; SRK2C  --  modify  --  ABF3
25 AT2G27720  --  is modified by  --  SNRK2-8; SNRK2.8; SRK2C  --  modify  --  ATBZIP12; DPBF4; EEL
26 AT2G27720  --  has similar expression pattern (mutual information value=0.815744) with  --  ATO1; TO1  --  has similar expression pattern (mutual information value=0.850783) with  --  AT1G79210
27 AT2G27720  --  has similar expression pattern (mutual information value=0.815744) with  --  ATO1; TO1  --  has similar expression pattern (mutual information value=0.855724) with  --  TOM6
28 AT2G27720  --  has similar expression pattern (mutual information value=0.815744) with  --  ATO1; TO1  --  has similar expression pattern (mutual information value=0.921027) with  --  PBA1
29 AT2G27720  --  has similar expression pattern (mutual information value=0.815744) with  --  ATO1; TO1  --  has similar expression pattern (mutual information value=0.831443) with  --  U1A
30 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  interacts with  --  AT1G63480
31 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=1.23668) with  --  AT2G42910
32 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=1.17983) with  --  AT3G55750
33 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=1.17983) with  --  AT1G41880
34 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=1.19161) with  --  AT3G09680
35 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=1.19161) with  --  AT5G02960
36 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=1.15424) with  --  AT3G11250
37 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=1.28687) with  --  AT3G60770
38 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=0.852106) with  --  DegP9
39 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=0.933047) with  --  ATRAN3; RAN3
40 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=1.04547) with  --  AT1G58983
41 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=1.04547) with  --  AT1G59359
42 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=1.04547) with  --  AT1G58684
43 AT2G27720  --  has similar expression pattern (mutual information value=1.23064) with  --  EMB2296  --  has similar expression pattern (mutual information value=1.04547) with  --  XW6
44 AT2G27720  --  has similar expression pattern (mutual information value=1.47173) with  --  AT1G67430  --  interacts with  --  OBE1
45 AT2G27720  --  has similar expression pattern (mutual information value=1.47173) with  --  AT1G67430  --  has similar expression pattern (mutual information value=1.17165) with  --  AT1G77940
46 AT2G27720  --  has similar expression pattern (mutual information value=1.47173) with  --  AT1G67430  --  has similar expression pattern (mutual information value=1.31676) with  --  AT3G05560
47 AT2G27720  --  has similar expression pattern (mutual information value=1.47173) with  --  AT1G67430  --  has similar expression pattern (mutual information value=1.07118) with  --  AT3G01790
48 AT2G27720  --  has similar expression pattern (mutual information value=1.47173) with  --  AT1G67430  --  has similar expression pattern (mutual information value=1.082) with  --  AT5G02450
49 AT2G27720  --  has similar expression pattern (mutual information value=1.47173) with  --  AT1G67430  --  has similar expression pattern (mutual information value=1.41786) with  --  AT2G05220
50 AT2G27720  --  has similar expression pattern (mutual information value=1.47173) with  --  AT1G67430  --  has similar expression pattern (mutual information value=1.41786) with  --  AT5G04800
51 AT2G27720  --  has similar expression pattern (mutual information value=1.43403) with  --  RPS15  --  interacts with  --  AHL29; SOB3
52 AT2G27720  --  has similar expression pattern (mutual information value=1.43403) with  --  RPS15  --  interacts with  --  ATSYP23; SYP23
53 AT2G27720  --  has similar expression pattern (mutual information value=1.43403) with  --  RPS15  --  has similar expression pattern (mutual information value=1.12283) with  --  AT5G52650
54 AT2G27720  --  has similar expression pattern (mutual information value=1.43403) with  --  RPS15  --  has similar expression pattern (mutual information value=1.1392) with  --  AT5G16130
55 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.54842) with  --  RPL24A
56 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.25705) with  --  AT1G26880
57 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.16202) with  --  EMB2762
58 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.29363) with  --  RPL27A; RPL27AB
59 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.27964) with  --  NOP56
60 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.11796) with  --  AT1G80750
61 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.26716) with  --  AT1G55890
62 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.15584) with  --  AP40; P40; RP40; RPSAA
63 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.06565) with  --  AT1G73230
64 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.18922) with  --  ATVDAC1; VDAC1
65 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.01511) with  --  RPS2
66 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.14318) with  --  RPS10
67 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.0476) with  --  CARA; VEN6
68 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.24341) with  --  AT2G33370
69 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.3826) with  --  AT4G12600
70 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.36382) with  --  AT4G25740
71 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.3164) with  --  AT3G44590
72 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.26624) with  --  AT5G60670
73 AT2G27720  --  has similar expression pattern (mutual information value=1.39054) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.48976) with  --  AT5G61170
74 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  interacts with  --  LSU2
75 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.866314) with  --  ATPAE1; PAE1
76 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.12316) with  --  AT1G29250
77 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.12115) with  --  AT2G43460
78 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.914374) with  --  AT1G20430
79 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G09500
80 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.923212) with  --  AT3G09470
81 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.09753) with  --  EMB1080
82 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.49304) with  --  AT3G53890
83 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.1748) with  --  TOM5
84 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.19415) with  --  AT5G18790
85 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.19415) with  --  AT3G06320
86 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.850223) with  --  AT5G18920
87 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.871164) with  --  AT5G39850
88 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.02978) with  --  ATTOM22-V; TOM22-V; TOM9-2
89 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.851838) with  --  AT5G27700
90 AT2G27720  --  has similar expression pattern (mutual information value=1.37344) with  --  AT3G44010  --  interacts with  --  AT1G08590
91 AT2G27720  --  has similar expression pattern (mutual information value=0.833653) with  --  AT3G47833  --  has similar expression pattern (mutual information value=0.979953) with  --  AT2G20820
92 AT2G27720  --  has similar expression pattern (mutual information value=0.833653) with  --  AT3G47833  --  has similar expression pattern (mutual information value=0.847) with  --  AT1G67350
93 AT2G27720  --  has similar expression pattern (mutual information value=0.833653) with  --  AT3G47833  --  has similar expression pattern (mutual information value=0.952097) with  --  AT1G72170
94 AT2G27720  --  has similar expression pattern (mutual information value=0.967033) with  --  PAD1  --  interacts with  --  AT5G22310
95 AT2G27720  --  has similar expression pattern (mutual information value=0.967033) with  --  PAD1  --  interacts with  --  RGA1
96 AT2G27720  --  has similar expression pattern (mutual information value=0.967033) with  --  PAD1  --  interacts with  --  AKIN11; ATKIN11; KIN11; SNRK1.2
97 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF11
98 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF7
99 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF6
100 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ATB2; AtbZIP11; BZIP11; GBF6
101 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF3; ARL1; ATARL1
102 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF5
103 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF2/ARF1-BP
104 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  interacts with  --  EMB3108
105 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.18385) with  --  AML1; ATRPS5A; RPS5A
106 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.27116) with  --  AT1G08360
107 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.03972) with  --  AT1G52930
108 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.808268) with  --  EMB2811; RFC2
109 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.05213) with  --  AT3G13160
110 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.890643) with  --  MEE49
111 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.998319) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1
112 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.25229) with  --  EMB3010; RPS6B
113 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.18813) with  --  AT5G23900
114 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.06087) with  --  AT5G49560
115 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.816853) with  --  AT5G27470
116 AT2G27720  --  has similar expression pattern (mutual information value=1.17388) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.900633) with  --  AT4G14000
117 AT2G27720  --  has similar expression pattern (mutual information value=1.24562) with  --  AT3G56340  --  has similar expression pattern (mutual information value=1.14448) with  --  AT3G22230
118 AT2G27720  --  has similar expression pattern (mutual information value=1.24562) with  --  AT3G56340  --  has similar expression pattern (mutual information value=1.37059) with  --  AT3G53430
119 AT2G27720  --  has similar expression pattern (mutual information value=1.11074) with  --  AT5G03850  --  has similar expression pattern (mutual information value=0.906986) with  --  ATPRMT1A; PRMT1A
120 AT2G27720  --  has similar expression pattern (mutual information value=1.11074) with  --  AT5G03850  --  has similar expression pattern (mutual information value=0.988497) with  --  RPL10; RPL10A; SAC52
121 AT2G27720  --  has similar expression pattern (mutual information value=1.11074) with  --  AT5G03850  --  has similar expression pattern (mutual information value=0.943465) with  --  RPL18
122 AT2G27720  --  has similar expression pattern (mutual information value=1.11074) with  --  AT5G03850  --  has similar expression pattern (mutual information value=0.939399) with  --  AT4G34555
123 AT2G27720  --  has similar expression pattern (mutual information value=1.11074) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.09219) with  --  ROC2
124 AT2G27720  --  has similar expression pattern (mutual information value=1.11074) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.00194) with  --  AT3G58700
125 AT2G27720  --  has similar expression pattern (mutual information value=1.11074) with  --  AT5G03850  --  has similar expression pattern (mutual information value=0.97674) with  --  TIM8
126 AT2G27720  --  has similar expression pattern (mutual information value=1.11074) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.18462) with  --  ATEBP1; ATG2; EBP1
127 AT2G27720  --  has similar expression pattern (mutual information value=1.51243) with  --  AT5G47930  --  has similar expression pattern (mutual information value=1.03851) with  --  EDA27; NOP10
128 AT2G27720  --  has similar expression pattern (mutual information value=1.51243) with  --  AT5G47930  --  has similar expression pattern (mutual information value=0.927307) with  --  emb1129
129 AT2G27720  --  has similar expression pattern (mutual information value=1.51243) with  --  AT5G47930  --  has similar expression pattern (mutual information value=1.18963) with  --  AT1G01100
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact