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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G39850
Type: Protein GRN ID: np40587 Name:
Annotation: Ribosomal protein S4
Gene Locus: AT5G39850
Gene Expression (Affy ATH1 probeset): 249427_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14
3 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430
4 AT5G39850  --  has similar expression pattern (mutual information value=0.943936) with  --  AT3G25545
5 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020
6 AT5G39850  --  has similar expression pattern (mutual information value=0.962889) with  --  AT4G28200
7 AT5G39850  --  has similar expression pattern (mutual information value=0.936482) with  --  AT4G39300
8 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980
9 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G44010
10 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770
11 AT5G39850  --  has similar expression pattern (mutual information value=0.949243) with  --  AT5G06360
12 AT5G39850  --  has similar expression pattern (mutual information value=0.83321) with  --  AT4G14000
13 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  interacts with  --  HAP1; MAGO; MEE63
14 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  interacts with  --  AT1G15280
15 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  interacts with  --  EIF4A-III
16 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  interacts with  --  EIF4A1; RH4; TIF4A1
17 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  interacts with  --  ALY3; ATALY3
18 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  interacts with  --  ALY2; ATALY2
19 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  interacts with  --  ALY1; ATALY1
20 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  has similar expression pattern (mutual information value=0.907112) with  --  emb1129
21 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  has similar expression pattern (mutual information value=0.821327) with  --  ATPAE1; PAE1
22 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  has similar expression pattern (mutual information value=0.829872) with  --  EMB2811; RFC2
23 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  has similar expression pattern (mutual information value=0.817061) with  --  AT3G07910
24 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  has similar expression pattern (mutual information value=0.981005) with  --  PBD1; PRCGB
25 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  has similar expression pattern (mutual information value=1.01507) with  --  TOM5
26 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  has similar expression pattern (mutual information value=0.977269) with  --  AT5G18790
27 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  has similar expression pattern (mutual information value=0.977269) with  --  AT3G06320
28 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  has similar expression pattern (mutual information value=0.807842) with  --  AT5G42150
29 AT5G39850  --  has similar expression pattern (mutual information value=0.839808) with  --  Y14  --  has similar expression pattern (mutual information value=0.826383) with  --  AtXYP1; XYP1
30 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.984773) with  --  AT1G02870
31 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.923491) with  --  AT1G07830
32 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.905267) with  --  AT1G26740
33 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.831846) with  --  AT3G01740
34 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.871897) with  --  AT3G09500
35 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.964265) with  --  AT3G51010
36 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.903903) with  --  RPL24; RPL24B; STV1
37 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.893259) with  --  AT5G23900
38 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.922502) with  --  AT5G38650
39 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.838198) with  --  ARS5; ATPSM30; PAF1
40 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.840536) with  --  AT5G51510
41 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.832726) with  --  AT5G56940
42 AT5G39850  --  has similar expression pattern (mutual information value=0.992778) with  --  AT1G20430  --  has similar expression pattern (mutual information value=0.981913) with  --  AT4G15520
43 AT5G39850  --  has similar expression pattern (mutual information value=0.943936) with  --  AT3G25545  --  interacts with  --  LTA2; PLE2
44 AT5G39850  --  has similar expression pattern (mutual information value=0.943936) with  --  AT3G25545  --  has similar expression pattern (mutual information value=0.809467) with  --  RRP41
45 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  AT1G06790
46 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  AT3G06790
47 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  AT1G32580
48 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  AT3G15000
49 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  AT1G11430
50 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  AT1G72530
51 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  AT2G35240
52 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  AT5G44780
53 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  DAL; DAL1
54 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  MEF19
55 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  MEF21
56 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  MEF9
57 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  interacts with  --  MEF1
58 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.889255) with  --  AT1G61990
59 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=1.08434) with  --  EMB1860; TIM50
60 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=1.17895) with  --  AT1G52930
61 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.966775) with  --  ATWHY2; WHY2
62 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.952132) with  --  AT3G13940
63 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.888755) with  --  MEE49
64 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.913156) with  --  AT4G12600
65 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=1.00825) with  --  BIR6
66 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.91246) with  --  RID3
67 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.852468) with  --  AT3G49990
68 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.968922) with  --  AT3G61100
69 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.903961) with  --  AT3G63090
70 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.875186) with  --  AT5G12220
71 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.955642) with  --  PYRD
72 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=1.06331) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
73 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.897242) with  --  ATMSI1; MEE70; MSI1
74 AT5G39850  --  has similar expression pattern (mutual information value=0.885334) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.815995) with  --  emb2473; MIRO1
75 AT5G39850  --  has similar expression pattern (mutual information value=0.962889) with  --  AT4G28200  --  interacts with  --  LSU1
76 AT5G39850  --  has similar expression pattern (mutual information value=0.962889) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.921048) with  --  AT2G40700
77 AT5G39850  --  has similar expression pattern (mutual information value=0.962889) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.892862) with  --  STRS1
78 AT5G39850  --  has similar expression pattern (mutual information value=0.962889) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.814498) with  --  CSN6B
79 AT5G39850  --  has similar expression pattern (mutual information value=0.962889) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.90951) with  --  AT4G38890
80 AT5G39850  --  has similar expression pattern (mutual information value=0.936482) with  --  AT4G39300  --  has similar expression pattern (mutual information value=0.871844) with  --  AT1G54770
81 AT5G39850  --  has similar expression pattern (mutual information value=0.936482) with  --  AT4G39300  --  has similar expression pattern (mutual information value=1.09792) with  --  TOM6
82 AT5G39850  --  has similar expression pattern (mutual information value=0.936482) with  --  AT4G39300  --  has similar expression pattern (mutual information value=1.1029) with  --  AT3G11250
83 AT5G39850  --  has similar expression pattern (mutual information value=0.936482) with  --  AT4G39300  --  has similar expression pattern (mutual information value=0.927446) with  --  AT5G11630
84 AT5G39850  --  has similar expression pattern (mutual information value=0.936482) with  --  AT4G39300  --  has similar expression pattern (mutual information value=0.818196) with  --  AT5G14030
85 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  interacts with  --  LSU2
86 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.839062) with  --  ATO1; TO1
87 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.37344) with  --  AT2G27720
88 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.12316) with  --  AT1G29250
89 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.12115) with  --  AT2G43460
90 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.923212) with  --  AT3G09470
91 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.17748) with  --  AT4G29390
92 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.842936) with  --  AT3G47833
93 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.09753) with  --  EMB1080
94 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.970314) with  --  PAD1
95 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.49304) with  --  AT3G53890
96 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.850223) with  --  AT5G18920
97 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.02978) with  --  ATTOM22-V; TOM22-V; TOM9-2
98 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.53528) with  --  AT5G47930
99 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.851838) with  --  AT5G27700
100 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.843512) with  --  U1A
101 AT5G39850  --  has similar expression pattern (mutual information value=0.871164) with  --  AT3G44010  --  interacts with  --  AT1G08590
102 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.28687) with  --  EMB2296
103 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.28687) with  --  AT4G36130
104 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=0.890333) with  --  RPL16A
105 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.18982) with  --  AT2G21580
106 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.22778) with  --  AT1G70600
107 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.22778) with  --  RPL27A; RPL27AB
108 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.25083) with  --  AT3G07110
109 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.22729) with  --  AT3G09680
110 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.22729) with  --  AT5G02960
111 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.11414) with  --  AT3G18740
112 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=0.990245) with  --  AT3G12370
113 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.13292) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1
114 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.12665) with  --  AT4G25740
115 AT5G39850  --  has similar expression pattern (mutual information value=0.929642) with  --  AT3G60770  --  has similar expression pattern (mutual information value=1.20221) with  --  AT5G56670
116 AT5G39850  --  has similar expression pattern (mutual information value=0.949243) with  --  AT5G06360  --  has similar expression pattern (mutual information value=1.08231) with  --  EDA27; NOP10
117 AT5G39850  --  has similar expression pattern (mutual information value=0.949243) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.816554) with  --  AT1G15420
118 AT5G39850  --  has similar expression pattern (mutual information value=0.949243) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.837283) with  --  AT3G02560
119 AT5G39850  --  has similar expression pattern (mutual information value=0.949243) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.961865) with  --  AT3G58470
120 AT5G39850  --  has similar expression pattern (mutual information value=0.83321) with  --  AT4G14000  --  has similar expression pattern (mutual information value=0.8299) with  --  AT2G16800
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