Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G27850
Type: Protein GRN ID: np38731 Name:
Annotation: Ribosomal protein L18e/L15 superfamily protein
Gene Locus: AT5G27850
Gene Expression (Affy ATH1 probeset): 246758_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G27850  --  interacts with  --  ATCDPK2/CPK11
3 AT5G27850  --  has similar expression pattern (mutual information value=1.10502) with  --  AML1; ATRPS5A; RPS5A
4 AT5G27850  --  has similar expression pattern (mutual information value=0.946163) with  --  AT1G15930
5 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360
6 AT5G27850  --  has similar expression pattern (mutual information value=0.864995) with  --  AT4G10320
7 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1
8 AT5G27850  --  has similar expression pattern (mutual information value=1.02481) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1
9 AT5G27850  --  has similar expression pattern (mutual information value=1.35721) with  --  EMB3010; RPS6B
10 AT5G27850  --  has similar expression pattern (mutual information value=1.19268) with  --  AT5G22440
11 AT5G27850  --  has similar expression pattern (mutual information value=1.0842) with  --  AT5G49560
12 AT5G27850  --  has similar expression pattern (mutual information value=0.825672) with  --  AT5G51590
13 AT5G27850  --  has similar expression pattern (mutual information value=0.855301) with  --  AT5G27470
14 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  ABI5
15 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  ABF3
16 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  ABF1
17 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  AHG3/pp2ca
18 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  AHG1
19 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  CPK24
20 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  ATDI19; DI19
21 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  AT5G41670
22 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  AT5G27760
23 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  IQD24
24 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  ATCPL1; CPL1; FRY2
25 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  NAGS1
26 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  AT2G32750
27 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  AT1G25550
28 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  PIN7
29 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  AtHB32; HB32; ZHD14
30 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  AT3G22530
31 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  PSB29; THF1
32 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  mtACP2
33 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  ATTOC33; PPI1; TOC33
34 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  ADF3
35 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  UCH2
36 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  AT1G74470
37 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  HSP1
38 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  ATBT2; BT2
39 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  AT5G52550
40 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  AT3G26510
41 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  interacts with  --  ATSYP23; SYP23
42 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  modify  --  ATWRKY8; WRKY8
43 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  modify  --  ATRBOH D
44 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  modify  --  ATRBOH F
45 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  modify  --  ATWRKY28; WRKY28
46 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  modify  --  ABF4/AREB2
47 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  modify  --  ABF2/AREB1
48 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  modify  --  ATWRKY48; WRKY48
49 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  modify  --  ATKCO1; ATTPK1; KCO1; KCO1; TPK1
50 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  transport  --  Sterol
51 AT5G27850  --  interacts with  --  ATCDPK2/CPK11  --  is a member of  --  ATCDPK3 CPK4 CDPK6 ATCDPK2 CPK11 ATCDPK2 ( alias ) CPK11 ATCDPK2 ( alias ) CPK11 cpk21, coding gene
52 AT5G27850  --  has similar expression pattern (mutual information value=1.10502) with  --  AML1; ATRPS5A; RPS5A  --  has similar expression pattern (mutual information value=0.93555) with  --  PGY1
53 AT5G27850  --  has similar expression pattern (mutual information value=1.10502) with  --  AML1; ATRPS5A; RPS5A  --  has similar expression pattern (mutual information value=0.91306) with  --  AT1G63660
54 AT5G27850  --  has similar expression pattern (mutual information value=1.10502) with  --  AML1; ATRPS5A; RPS5A  --  has similar expression pattern (mutual information value=0.896423) with  --  AT3G03920
55 AT5G27850  --  has similar expression pattern (mutual information value=1.10502) with  --  AML1; ATRPS5A; RPS5A  --  has similar expression pattern (mutual information value=1.01672) with  --  AT3G02560
56 AT5G27850  --  has similar expression pattern (mutual information value=1.10502) with  --  AML1; ATRPS5A; RPS5A  --  has similar expression pattern (mutual information value=0.870094) with  --  AT5G02870
57 AT5G27850  --  has similar expression pattern (mutual information value=0.946163) with  --  AT1G15930  --  has similar expression pattern (mutual information value=0.826644) with  --  AT5G07090
58 AT5G27850  --  has similar expression pattern (mutual information value=0.946163) with  --  AT1G15930  --  has similar expression pattern (mutual information value=0.825223) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2
59 AT5G27850  --  has similar expression pattern (mutual information value=0.946163) with  --  AT1G15930  --  has similar expression pattern (mutual information value=0.842616) with  --  AT5G35530
60 AT5G27850  --  has similar expression pattern (mutual information value=0.946163) with  --  AT1G15930  --  has similar expression pattern (mutual information value=0.89912) with  --  AT5G15520
61 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.13269) with  --  RPL16A
62 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.91571) with  --  AT1G07830
63 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.12616) with  --  AT1G29250
64 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.00733) with  --  DECOY
65 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.04301) with  --  AT1G52930
66 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.837541) with  --  ATEIF3G1; EIF3G1
67 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.1364) with  --  AT3G09500
68 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.979291) with  --  AT3G13160
69 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.960639) with  --  AT3G18940
70 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.867981) with  --  RPS18C
71 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.07691) with  --  EMB1080
72 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=0.8186) with  --  AT5G41970
73 AT5G27850  --  has similar expression pattern (mutual information value=1.17944) with  --  AT1G08360  --  has similar expression pattern (mutual information value=1.16838) with  --  AT5G56940
74 AT5G27850  --  has similar expression pattern (mutual information value=0.864995) with  --  AT4G10320  --  has similar expression pattern (mutual information value=0.813685) with  --  AT3G10610
75 AT5G27850  --  has similar expression pattern (mutual information value=0.864995) with  --  AT4G10320  --  has similar expression pattern (mutual information value=0.808883) with  --  DegP9
76 AT5G27850  --  has similar expression pattern (mutual information value=0.864995) with  --  AT4G10320  --  has product (in catalytic reaction)  --  L-Isoleucyl-tRNA(Ile)
77 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF11
78 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF7
79 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF6
80 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ATB2; AtbZIP11; BZIP11; GBF6
81 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF3; ARL1; ATARL1
82 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF5
83 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  interacts with  --  ARF2/ARF1-BP
84 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  interacts with  --  EMB3108
85 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.17388) with  --  AT2G27720
86 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.19739) with  --  AT4G36130
87 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.35824) with  --  AT3G55750
88 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.35824) with  --  AT1G41880
89 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.1907) with  --  AT1G55890
90 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.808268) with  --  EMB2811; RFC2
91 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.903903) with  --  AT1G20430
92 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.37099) with  --  AT3G11250
93 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.890643) with  --  MEE49
94 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.15762) with  --  AT3G43980
95 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.15762) with  --  AT3G44010
96 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.11676) with  --  AT3G60770
97 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=1.18813) with  --  AT5G23900
98 AT5G27850  --  has similar expression pattern (mutual information value=1.4526) with  --  RPL24; RPL24B; STV1  --  has similar expression pattern (mutual information value=0.900633) with  --  AT4G14000
99 AT5G27850  --  has similar expression pattern (mutual information value=1.02481) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1  --  interacts with  --  ATCSN7; COP15; CSN7; FUS5
100 AT5G27850  --  has similar expression pattern (mutual information value=1.02481) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1  --  interacts with  --  ATEIF3C-1; ATTIF3C1; EIF3C; EIF3C-1; TIF3C1
101 AT5G27850  --  has similar expression pattern (mutual information value=1.02481) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1  --  has similar expression pattern (mutual information value=0.958612) with  --  AT1G27400
102 AT5G27850  --  has similar expression pattern (mutual information value=1.02481) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1  --  has similar expression pattern (mutual information value=0.957425) with  --  RPS6; RPS6A
103 AT5G27850  --  has similar expression pattern (mutual information value=1.02481) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1  --  has similar expression pattern (mutual information value=0.910013) with  --  ATFUS6; ATSK31; COP11; CSN1; EMB78; FUS6; SK31
104 AT5G27850  --  has similar expression pattern (mutual information value=1.02481) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1  --  has similar expression pattern (mutual information value=1.21466) with  --  AT5G15810
105 AT5G27850  --  has similar expression pattern (mutual information value=1.02481) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1  --  has similar expression pattern (mutual information value=1.12437) with  --  ATEBP1; ATG2; EBP1
106 AT5G27850  --  has similar expression pattern (mutual information value=1.02481) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1  --  has similar expression pattern (mutual information value=0.811235) with  --  OVA9
107 AT5G27850  --  has similar expression pattern (mutual information value=1.02481) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1  --  has similar expression pattern (mutual information value=1.04102) with  --  AT4G16720
108 AT5G27850  --  has similar expression pattern (mutual information value=1.35721) with  --  EMB3010; RPS6B  --  interacts with  --  NAP1;3; NFA03; NFA3
109 AT5G27850  --  has similar expression pattern (mutual information value=1.35721) with  --  EMB3010; RPS6B  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
110 AT5G27850  --  has similar expression pattern (mutual information value=1.35721) with  --  EMB3010; RPS6B  --  interacts with  --  TGA1
111 AT5G27850  --  has similar expression pattern (mutual information value=1.35721) with  --  EMB3010; RPS6B  --  interacts with  --  ATNAP1;1; NAP1;1
112 AT5G27850  --  has similar expression pattern (mutual information value=1.19268) with  --  AT5G22440  --  has similar expression pattern (mutual information value=0.826462) with  --  ATL5; OLI5; PGY3; RPL5A
113 AT5G27850  --  has similar expression pattern (mutual information value=1.19268) with  --  AT5G22440  --  has similar expression pattern (mutual information value=1.09647) with  --  AT1G34030
114 AT5G27850  --  has similar expression pattern (mutual information value=1.19268) with  --  AT5G22440  --  has similar expression pattern (mutual information value=1.05487) with  --  AT5G41520
115 AT5G27850  --  has similar expression pattern (mutual information value=0.825672) with  --  AT5G51590  --  interacts with  --  AT4G25320
116 AT5G27850  --  has similar expression pattern (mutual information value=0.855301) with  --  AT5G27470  --  has product (in catalytic reaction)  --  L-Seryl-tRNA(Ser)
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact