Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G18920
Type: Protein GRN ID: np40066 Name:
Annotation: Cox19-like CHCH family protein
Gene Locus: AT5G18920
Gene Expression (Affy ATH1 probeset): 249954_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G18920  --  has similar expression pattern (mutual information value=0.815032) with  --  AT1G68680
3 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980
4 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G44010
5 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790
6 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT3G06320
7 AT5G18920  --  has similar expression pattern (mutual information value=0.815032) with  --  AT1G68680  --  interacts with  --  AT2G28990
8 AT5G18920  --  has similar expression pattern (mutual information value=0.815032) with  --  AT1G68680  --  interacts with  --  ATCNGC17; CNGC17
9 AT5G18920  --  has similar expression pattern (mutual information value=0.815032) with  --  AT1G68680  --  interacts with  --  ATICMTA; ATPCM; ATSTE14; ATSTE14A; ICMTA; STE14; STE14A
10 AT5G18920  --  has similar expression pattern (mutual information value=0.815032) with  --  AT1G68680  --  interacts with  --  AT3G13050
11 AT5G18920  --  has similar expression pattern (mutual information value=0.815032) with  --  AT1G68680  --  interacts with  --  ATMSL10; MSL10
12 AT5G18920  --  has similar expression pattern (mutual information value=0.815032) with  --  AT1G68680  --  interacts with  --  YUUCA5
13 AT5G18920  --  has similar expression pattern (mutual information value=0.815032) with  --  AT1G68680  --  interacts with  --  AT1G63480
14 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  interacts with  --  LSU2
15 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.839062) with  --  ATO1; TO1
16 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.37344) with  --  AT2G27720
17 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.26136) with  --  TOM6
18 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.866314) with  --  ATPAE1; PAE1
19 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.12316) with  --  AT1G29250
20 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.12115) with  --  AT2G43460
21 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.914374) with  --  AT1G20430
22 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.30455) with  --  AT3G09500
23 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.923212) with  --  AT3G09470
24 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.17748) with  --  AT4G29390
25 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.842936) with  --  AT3G47833
26 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.09753) with  --  EMB1080
27 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.970314) with  --  PAD1
28 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.15762) with  --  RPL24; RPL24B; STV1
29 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.49304) with  --  AT3G53890
30 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.54361) with  --  AT3G60770
31 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.1748) with  --  TOM5
32 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.871164) with  --  AT5G39850
33 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.02978) with  --  ATTOM22-V; TOM22-V; TOM9-2
34 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=1.53528) with  --  AT5G47930
35 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.851838) with  --  AT5G27700
36 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G43980  --  has similar expression pattern (mutual information value=0.843512) with  --  U1A
37 AT5G18920  --  has similar expression pattern (mutual information value=0.850223) with  --  AT3G44010  --  interacts with  --  AT1G08590
38 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=0.849281) with  --  AT1G24050
39 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=1.16204) with  --  emb1129
40 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=0.970716) with  --  AT1G02870
41 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=0.977269) with  --  Y14
42 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=0.831768) with  --  AT1G36310
43 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=0.962035) with  --  AT3G09700
44 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=0.819568) with  --  AT3G25545
45 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=1.02992) with  --  AT3G18760
46 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=0.818052) with  --  AT4G28200
47 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=0.908383) with  --  RID3
48 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=0.976556) with  --  AT3G51010
49 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=0.834324) with  --  AT3G61100
50 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=0.965718) with  --  RRP41
51 AT5G18920  --  has similar expression pattern (mutual information value=0.864104) with  --  AT5G18790  --  has similar expression pattern (mutual information value=1.0497) with  --  AT5G56940
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact