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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G04840
Type: Protein GRN ID: np26576 Name:
Annotation: Ribosomal protein S3Ae
Gene Locus: AT3G04840
Gene Expression (Affy ATH1 probeset): 259096_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G04840  --  interacts with  --  NDL1
3 AT3G04840  --  has similar expression pattern (mutual information value=1.28593) with  --  ATRPL23A; RPL23A; RPL23AA
4 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710
5 AT3G04840  --  has similar expression pattern (mutual information value=1.01427) with  --  EIF2 GAMMA
6 AT3G04840  --  has similar expression pattern (mutual information value=1.10394) with  --  AT1G73230
7 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A
8 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT
9 AT3G04840  --  has similar expression pattern (mutual information value=1.38953) with  --  AT1G18540
10 AT3G04840  --  has similar expression pattern (mutual information value=1.27185) with  --  AT4G13170
11 AT3G04840  --  has similar expression pattern (mutual information value=1.83189) with  --  AT5G61170
12 AT3G04840  --  has similar expression pattern (mutual information value=1.60028) with  --  AT5G16130
13 AT3G04840  --  has similar expression pattern (mutual information value=1.16236) with  --  PAB4; PABP4
14 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  YAB2
15 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT1G10740
16 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  PAB1
17 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT1G22970
18 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ANNAT1; ATOXY5; OXY5
19 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  TUA2
20 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ATSPPL2; SPPL2
21 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT1G72900
22 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT1G72920
23 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT1G75420
24 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT1G79510
25 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  KCS9
26 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ROC3
27 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  SLP3
28 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ALDH11A3
29 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT2G24420
30 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  CKS2
31 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  TIM10
32 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ADS2; DS2
33 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  SLT1
34 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ATPI4K GAMMA 4; PI4K GAMMA 4; UBDK GAMMA 4
35 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ATBCA1; ATSABP3; CA1; SABP3
36 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ATMT-1; ATMT-K; MT2A
37 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  EIF4A-III
38 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  PDF1; PP2AA2; PR 65
39 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ATLOX2
40 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AtPPa4; PPa4
41 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ARS27A; RS27A
42 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT3G62460
43 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ATXT1; XT1; XXT1
44 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT4G10840
45 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ATCYS-3A; CYTACS1; OASA1; OLD3
46 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT4G16240
47 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT4G16450
48 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT4G16500
49 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  CH-42; CH42; CHL11; CHLI-1; CHLI1
50 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  LSD1
51 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT4G29780
52 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT4G38550
53 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT4G38690
54 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT4G40030
55 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  IDH-V
56 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  BPA1
57 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ATCIMS; ATMETS; ATMS1
58 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT5G24710
59 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT5G24740
60 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT5G25100
61 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ADH2; ATGSNOR1; GSNOR; HOT5; PAR2
62 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT5G46780
63 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  BOB1
64 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  XBAT32
65 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  COB
66 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  AT5G63370
67 AT3G04840  --  interacts with  --  NDL1  --  interacts with  --  ATSYP23; SYP23
68 AT3G04840  --  has similar expression pattern (mutual information value=1.28593) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.00699) with  --  AT2G19750
69 AT3G04840  --  has similar expression pattern (mutual information value=1.28593) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.03879) with  --  AT3G28900
70 AT3G04840  --  has similar expression pattern (mutual information value=1.28593) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.05345) with  --  AT3G22230
71 AT3G04840  --  has similar expression pattern (mutual information value=1.28593) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=0.935448) with  --  AT4G13720
72 AT3G04840  --  has similar expression pattern (mutual information value=1.28593) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.20042) with  --  AT2G05220
73 AT3G04840  --  has similar expression pattern (mutual information value=1.28593) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.20042) with  --  AT5G04800
74 AT3G04840  --  has similar expression pattern (mutual information value=1.28593) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.20042) with  --  AT2G04390
75 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.14158) with  --  AT1G27400
76 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.19317) with  --  AT1G26880
77 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.15877) with  --  NOP56
78 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.36741) with  --  AT3G07110
79 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.43007) with  --  AT1G34030
80 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.20102) with  --  AT4G00810
81 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.20304) with  --  RPL16B
82 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.20304) with  --  AT5G45775
83 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.05375) with  --  AT3G45030
84 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.41108) with  --  AT3G53430
85 AT3G04840  --  has similar expression pattern (mutual information value=1.39155) with  --  AT2G27710  --  has similar expression pattern (mutual information value=1.06059) with  --  AT5G09510
86 AT3G04840  --  has similar expression pattern (mutual information value=1.10394) with  --  AT1G73230  --  has similar expression pattern (mutual information value=0.845361) with  --  AteIF3f; EIF2; eIF3F
87 AT3G04840  --  has similar expression pattern (mutual information value=1.10394) with  --  AT1G73230  --  has similar expression pattern (mutual information value=1.00213) with  --  AT1G74050
88 AT3G04840  --  has similar expression pattern (mutual information value=1.10394) with  --  AT1G73230  --  has similar expression pattern (mutual information value=0.98803) with  --  AT4G12600
89 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  interacts with  --  ARF8
90 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  interacts with  --  ARF7
91 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  interacts with  --  ARF5
92 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  interacts with  --  ARF2/ARF1-BP
93 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  interacts with  --  ARF6
94 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  interacts with  --  ARF3; ARL1; ATARL1
95 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=0.956163) with  --  UBQ5
96 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=0.956163) with  --  UBQ6
97 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=1.24517) with  --  AT1G30580
98 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=0.870423) with  --  emb2386
99 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=0.977003) with  --  AT1G33120
100 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=0.977003) with  --  PGY2
101 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=0.921852) with  --  AT4G10450
102 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=0.813853) with  --  AT1G07930
103 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=0.813853) with  --  AT1G07920
104 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=0.813853) with  --  AT1G07940
105 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=0.897276) with  --  AT5G26360
106 AT3G04840  --  has similar expression pattern (mutual information value=0.904397) with  --  ATL5; OLI5; PGY3; RPL5A  --  has similar expression pattern (mutual information value=0.988553) with  --  AT4G16720
107 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  interacts with  --  ftsh3
108 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  interacts with  --  ATWNK8; EIP1; WNK8
109 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  interacts with  --  PIRL4
110 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  interacts with  --  AT5G48650
111 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  interacts with  --  AT5G43960
112 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  interacts with  --  SE
113 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.15482) with  --  RPL24A
114 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.846337) with  --  AT1G14810
115 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.20648) with  --  AT1G77940
116 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.997471) with  --  AT3G14390
117 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.997471) with  --  AT5G11880
118 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.06694) with  --  CARA; VEN6
119 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.808565) with  --  ATIMPALPHA3; IMPA-3; MOS6
120 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.851738) with  --  AT4G24830
121 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.20587) with  --  AT5G58420
122 AT3G04840  --  has similar expression pattern (mutual information value=1.16573) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.09828) with  --  AT5G60670
123 AT3G04840  --  has similar expression pattern (mutual information value=1.38953) with  --  AT1G18540  --  has similar expression pattern (mutual information value=0.81077) with  --  AT2G42710
124 AT3G04840  --  has similar expression pattern (mutual information value=1.27185) with  --  AT4G13170  --  has similar expression pattern (mutual information value=1.12962) with  --  AT4G25740
125 AT3G04840  --  has similar expression pattern (mutual information value=1.27185) with  --  AT4G13170  --  has similar expression pattern (mutual information value=0.854509) with  --  AT4G39880
126 AT3G04840  --  has similar expression pattern (mutual information value=1.27185) with  --  AT4G13170  --  has similar expression pattern (mutual information value=1.09828) with  --  AT5G10920
127 AT3G04840  --  has similar expression pattern (mutual information value=1.27185) with  --  AT4G13170  --  has similar expression pattern (mutual information value=1.08144) with  --  AT5G27820
128 AT3G04840  --  has similar expression pattern (mutual information value=1.83189) with  --  AT5G61170  --  has similar expression pattern (mutual information value=0.910158) with  --  AT3G13230
129 AT3G04840  --  has similar expression pattern (mutual information value=1.60028) with  --  AT5G16130  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
130 AT3G04840  --  has similar expression pattern (mutual information value=1.60028) with  --  AT5G16130  --  has similar expression pattern (mutual information value=1.1392) with  --  RPS15
131 AT3G04840  --  has similar expression pattern (mutual information value=1.60028) with  --  AT5G16130  --  has similar expression pattern (mutual information value=1.15201) with  --  AT3G09680
132 AT3G04840  --  has similar expression pattern (mutual information value=1.60028) with  --  AT5G16130  --  has similar expression pattern (mutual information value=1.15201) with  --  AT5G02960
133 AT3G04840  --  has similar expression pattern (mutual information value=1.60028) with  --  AT5G16130  --  has similar expression pattern (mutual information value=0.817182) with  --  AT5G10010
134 AT3G04840  --  has similar expression pattern (mutual information value=1.60028) with  --  AT5G16130  --  has similar expression pattern (mutual information value=1.04042) with  --  AT1G58983
135 AT3G04840  --  has similar expression pattern (mutual information value=1.60028) with  --  AT5G16130  --  has similar expression pattern (mutual information value=1.04042) with  --  AT1G59359
136 AT3G04840  --  has similar expression pattern (mutual information value=1.60028) with  --  AT5G16130  --  has similar expression pattern (mutual information value=1.04042) with  --  AT1G58684
137 AT3G04840  --  has similar expression pattern (mutual information value=1.60028) with  --  AT5G16130  --  has similar expression pattern (mutual information value=1.04042) with  --  XW6
138 AT3G04840  --  has similar expression pattern (mutual information value=1.16236) with  --  PAB4; PABP4  --  interacts with  --  AT4G24840
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