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Location:  Home > Details for node AT5G48760
Type: Protein GRN ID: np36779 Name:
Annotation: Ribosomal protein L13 family protein
Gene Locus: AT5G48760
Gene Expression (Affy ATH1 probeset): 248655_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G48760  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G18380
3 AT5G48760  --  has similar expression pattern (mutual information value=1.04253) with  --  AT2G09990
4 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  AT1G33120
5 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  PGY2
6 AT5G48760  --  has similar expression pattern (mutual information value=0.964204) with  --  AP40; P40; RP40; RPSAA
7 AT5G48760  --  has similar expression pattern (mutual information value=1.11465) with  --  emb2171
8 AT5G48760  --  has similar expression pattern (mutual information value=1.20387) with  --  AT4G10450
9 AT5G48760  --  has similar expression pattern (mutual information value=0.909787) with  --  ATGRP2; GR-RBP2; GRP2
10 AT5G48760  --  has similar expression pattern (mutual information value=1.2954) with  --  RPL16B
11 AT5G48760  --  has similar expression pattern (mutual information value=1.2954) with  --  AT5G45775
12 AT5G48760  --  has similar expression pattern (mutual information value=0.825373) with  --  AT4G28360
13 AT5G48760  --  has similar expression pattern (mutual information value=0.825373) with  --  AT1G52370
14 AT5G48760  --  has similar expression pattern (mutual information value=1.01326) with  --  AT3G45030
15 AT5G48760  --  has similar expression pattern (mutual information value=1.32868) with  --  ARS27A; RS27A
16 AT5G48760  --  has similar expression pattern (mutual information value=0.83282) with  --  ECT3
17 AT5G48760  --  has similar expression pattern (mutual information value=1.14305) with  --  AT4G36420
18 AT5G48760  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G18380  --  has similar expression pattern (mutual information value=0.911012) with  --  AT2G37190
19 AT5G48760  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G18380  --  has similar expression pattern (mutual information value=0.888172) with  --  EDA27; NOP10
20 AT5G48760  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G18380  --  has similar expression pattern (mutual information value=1.29296) with  --  AT1G01100
21 AT5G48760  --  has similar expression pattern (mutual information value=1.04253) with  --  AT5G18380  --  has similar expression pattern (mutual information value=0.994112) with  --  AT5G27700
22 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  AT1G33120  --  has similar expression pattern (mutual information value=0.927729) with  --  UBQ5
23 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  AT1G33120  --  has similar expression pattern (mutual information value=0.927729) with  --  UBQ6
24 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  AT1G33120  --  has similar expression pattern (mutual information value=0.975152) with  --  AT1G30580
25 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  AT1G33120  --  has similar expression pattern (mutual information value=0.977003) with  --  ATL5; OLI5; PGY3; RPL5A
26 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  AT1G33120  --  has similar expression pattern (mutual information value=0.883332) with  --  smB
27 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  AT1G33120  --  has similar expression pattern (mutual information value=1.11785) with  --  AT3G53430
28 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  AT1G33120  --  has similar expression pattern (mutual information value=1.01749) with  --  AT5G67510
29 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  AT1G33120  --  is the target gene of  --  ath-miR5630b
30 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  AT1G33120  --  is the target gene of  --  ath-miR5630a
31 AT5G48760  --  has similar expression pattern (mutual information value=1.18397) with  --  PGY2  --  interacts with  --  AHK2
32 AT5G48760  --  has similar expression pattern (mutual information value=0.964204) with  --  AP40; P40; RP40; RPSAA  --  interacts with  --  AT1G63480
33 AT5G48760  --  has similar expression pattern (mutual information value=0.964204) with  --  AP40; P40; RP40; RPSAA  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
34 AT5G48760  --  has similar expression pattern (mutual information value=0.964204) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=1.08533) with  --  NOP56
35 AT5G48760  --  has similar expression pattern (mutual information value=0.964204) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=1.07488) with  --  AT1G55890
36 AT5G48760  --  has similar expression pattern (mutual information value=0.964204) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=0.919997) with  --  NRP1
37 AT5G48760  --  has similar expression pattern (mutual information value=0.964204) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=0.914241) with  --  AT3G13230
38 AT5G48760  --  has similar expression pattern (mutual information value=0.964204) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=1.1507) with  --  AT3G11250
39 AT5G48760  --  has similar expression pattern (mutual information value=0.964204) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=1.11659) with  --  HAP6
40 AT5G48760  --  has similar expression pattern (mutual information value=0.964204) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=0.800792) with  --  AT5G27120
41 AT5G48760  --  has similar expression pattern (mutual information value=0.964204) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=0.800792) with  --  AT5G27140
42 AT5G48760  --  has similar expression pattern (mutual information value=1.11465) with  --  emb2171  --  has similar expression pattern (mutual information value=0.871794) with  --  AT2G44120
43 AT5G48760  --  has similar expression pattern (mutual information value=1.11465) with  --  emb2171  --  has similar expression pattern (mutual information value=1.18508) with  --  RPL27A; RPL27AB
44 AT5G48760  --  has similar expression pattern (mutual information value=1.11465) with  --  emb2171  --  has similar expression pattern (mutual information value=1.05791) with  --  AT4G12600
45 AT5G48760  --  has similar expression pattern (mutual information value=1.11465) with  --  emb2171  --  has similar expression pattern (mutual information value=0.937246) with  --  AT3G51010
46 AT5G48760  --  has similar expression pattern (mutual information value=1.20387) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.862254) with  --  AT2G42710
47 AT5G48760  --  has similar expression pattern (mutual information value=1.20387) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.808364) with  --  ATRH53; PMH2
48 AT5G48760  --  has similar expression pattern (mutual information value=1.20387) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.808364) with  --  ATRH9; PMH1
49 AT5G48760  --  has similar expression pattern (mutual information value=1.20387) with  --  AT4G10450  --  has similar expression pattern (mutual information value=1.03219) with  --  AT1G18540
50 AT5G48760  --  has similar expression pattern (mutual information value=1.20387) with  --  AT4G10450  --  has similar expression pattern (mutual information value=1.32173) with  --  AT4G00810
51 AT5G48760  --  has similar expression pattern (mutual information value=1.20387) with  --  AT4G10450  --  has similar expression pattern (mutual information value=1.12061) with  --  NDPK1
52 AT5G48760  --  has similar expression pattern (mutual information value=1.20387) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G39880
53 AT5G48760  --  has similar expression pattern (mutual information value=1.20387) with  --  AT4G10450  --  has similar expression pattern (mutual information value=1.11484) with  --  AT5G41520
54 AT5G48760  --  has similar expression pattern (mutual information value=0.909787) with  --  ATGRP2; GR-RBP2; GRP2  --  has similar expression pattern (mutual information value=0.864618) with  --  AT2G43090
55 AT5G48760  --  has similar expression pattern (mutual information value=0.909787) with  --  ATGRP2; GR-RBP2; GRP2  --  interacts with  --  AT3G21215
56 AT5G48760  --  has similar expression pattern (mutual information value=1.2954) with  --  RPL16B  --  has similar expression pattern (mutual information value=0.951185) with  --  AT3G28900
57 AT5G48760  --  has similar expression pattern (mutual information value=1.2954) with  --  RPL16B  --  has similar expression pattern (mutual information value=1.08623) with  --  AT3G22230
58 AT5G48760  --  has similar expression pattern (mutual information value=1.2954) with  --  RPL16B  --  has similar expression pattern (mutual information value=1.07822) with  --  AT5G47700
59 AT5G48760  --  has similar expression pattern (mutual information value=1.2954) with  --  RPL16B  --  has similar expression pattern (mutual information value=0.868447) with  --  AT1G07930
60 AT5G48760  --  has similar expression pattern (mutual information value=1.2954) with  --  RPL16B  --  has similar expression pattern (mutual information value=0.868447) with  --  AT1G07920
61 AT5G48760  --  has similar expression pattern (mutual information value=1.2954) with  --  RPL16B  --  has similar expression pattern (mutual information value=0.868447) with  --  AT1G07940
62 AT5G48760  --  has similar expression pattern (mutual information value=1.01326) with  --  AT3G45030  --  has similar expression pattern (mutual information value=1.03185) with  --  emb2386
63 AT5G48760  --  has similar expression pattern (mutual information value=1.01326) with  --  AT3G45030  --  has similar expression pattern (mutual information value=0.994444) with  --  AT1G73230
64 AT5G48760  --  has similar expression pattern (mutual information value=1.01326) with  --  AT3G45030  --  has similar expression pattern (mutual information value=0.993636) with  --  AT3G02560
65 AT5G48760  --  has similar expression pattern (mutual information value=1.01326) with  --  AT3G45030  --  has similar expression pattern (mutual information value=1.03698) with  --  AT5G61170
66 AT5G48760  --  has similar expression pattern (mutual information value=1.01326) with  --  AT3G45030  --  has similar expression pattern (mutual information value=0.936902) with  --  AT5G19510
67 AT5G48760  --  has similar expression pattern (mutual information value=1.32868) with  --  ARS27A; RS27A  --  interacts with  --  NDL1
68 AT5G48760  --  has similar expression pattern (mutual information value=1.14305) with  --  AT4G36420  --  has similar expression pattern (mutual information value=0.983398) with  --  AT2G11910
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