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Location:  Home > Details for node AT3G13230
Type: Protein GRN ID: np25751 Name:
Annotation: RNA-binding KH domain-containing protein
Gene Locus: AT3G13230
Gene Expression (Affy ATH1 probeset): 257658_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880
3 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762
4 AT3G13230  --  has similar expression pattern (mutual information value=0.808111) with  --  AT2G31410
5 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395
6 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA
7 AT3G13230  --  has similar expression pattern (mutual information value=0.908534) with  --  NRP1
8 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620
9 AT3G13230  --  has similar expression pattern (mutual information value=0.931534) with  --  STRS1
10 AT3G13230  --  has similar expression pattern (mutual information value=1.00276) with  --  AT4G12600
11 AT3G13230  --  has similar expression pattern (mutual information value=0.907153) with  --  AT3G45030
12 AT3G13230  --  has similar expression pattern (mutual information value=1.05282) with  --  AT5G60990
13 AT3G13230  --  has similar expression pattern (mutual information value=0.910158) with  --  AT5G61170
14 AT3G13230  --  has similar expression pattern (mutual information value=0.987423) with  --  AT5G20160
15 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  interacts with  --  AHL29; SOB3
16 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.05101) with  --  AT2G19750
17 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.19317) with  --  AT2G27710
18 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.40094) with  --  AT1G70600
19 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.40094) with  --  RPL27A; RPL27AB
20 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.194) with  --  AT1G01100
21 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.03638) with  --  AT1G26750
22 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.25705) with  --  AT3G07110
23 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.31116) with  --  AT3G22230
24 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=0.889197) with  --  AT4G13720
25 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.2123) with  --  AT3G53430
26 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.02787) with  --  AT5G02610
27 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.44728) with  --  AT2G05220
28 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.44728) with  --  AT5G04800
29 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.44728) with  --  AT2G04390
30 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.38556) with  --  AT5G47930
31 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.21388) with  --  AT5G56670
32 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.15876) with  --  AT5G60670
33 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.21882) with  --  AT5G16130
34 AT3G13230  --  has similar expression pattern (mutual information value=0.944632) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.03623) with  --  AT4G36420
35 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762  --  has similar expression pattern (mutual information value=0.844884) with  --  AteIF3f; EIF2; eIF3F
36 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762  --  has similar expression pattern (mutual information value=0.981336) with  --  AT2G18900
37 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762  --  has similar expression pattern (mutual information value=1.03609) with  --  AT2G35790
38 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762  --  has similar expression pattern (mutual information value=0.816088) with  --  ILA
39 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762  --  has similar expression pattern (mutual information value=1.1708) with  --  NOP56
40 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762  --  has similar expression pattern (mutual information value=1.06789) with  --  AT1G80750
41 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762  --  has similar expression pattern (mutual information value=1.04123) with  --  RPS2
42 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762  --  has similar expression pattern (mutual information value=0.978575) with  --  RPSAb
43 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762  --  has similar expression pattern (mutual information value=1.16422) with  --  RPS10
44 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762  --  has similar expression pattern (mutual information value=1.04276) with  --  CARA; VEN6
45 AT3G13230  --  has similar expression pattern (mutual information value=1.07088) with  --  EMB2762  --  has similar expression pattern (mutual information value=0.839843) with  --  ATIMPALPHA3; IMPA-3; MOS6
46 AT3G13230  --  has similar expression pattern (mutual information value=0.808111) with  --  AT2G31410  --  interacts with  --  IMPA-2
47 AT3G13230  --  has similar expression pattern (mutual information value=0.808111) with  --  AT2G31410  --  interacts with  --  IMPA-4
48 AT3G13230  --  has similar expression pattern (mutual information value=0.808111) with  --  AT2G31410  --  has similar expression pattern (mutual information value=0.883343) with  --  AT1G02870
49 AT3G13230  --  has similar expression pattern (mutual information value=0.808111) with  --  AT2G31410  --  has similar expression pattern (mutual information value=0.840736) with  --  AT3G51010
50 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.44561) with  --  AT2G45710
51 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.26766) with  --  AT2G27775
52 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.10056) with  --  AT2G15000
53 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.32591) with  --  NFD6
54 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.28398) with  --  TOM6
55 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.931244) with  --  ATWHY2; WHY2
56 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.9865) with  --  AT3G15460
57 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.988054) with  --  AT3G25120
58 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.995613) with  --  AT3G20240
59 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.927576) with  --  AT3G12370
60 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.12679) with  --  AT4G32605
61 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.07965) with  --  AT4G37660
62 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.873356) with  --  AT3G59840
63 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.03972) with  --  AT5G47455
64 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.875358) with  --  TIM8
65 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.0998) with  --  RPS28
66 AT3G13230  --  has similar expression pattern (mutual information value=1.00982) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.90701) with  --  U1A
67 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA  --  interacts with  --  AT3G53890
68 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA  --  interacts with  --  AT1G63480
69 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
70 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=1.07488) with  --  AT1G55890
71 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=0.926733) with  --  emb2171
72 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=1.1507) with  --  AT3G11250
73 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=0.8825) with  --  smB
74 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=1.11659) with  --  HAP6
75 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=0.964204) with  --  AT5G48760
76 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=0.800792) with  --  AT5G27120
77 AT3G13230  --  has similar expression pattern (mutual information value=0.914241) with  --  AP40; P40; RP40; RPSAA  --  has similar expression pattern (mutual information value=0.800792) with  --  AT5G27140
78 AT3G13230  --  has similar expression pattern (mutual information value=0.908534) with  --  NRP1  --  interacts with  --  VPS9B
79 AT3G13230  --  has similar expression pattern (mutual information value=0.908534) with  --  NRP1  --  has similar expression pattern (mutual information value=0.804193) with  --  AT2G11910
80 AT3G13230  --  has similar expression pattern (mutual information value=0.908534) with  --  NRP1  --  has similar expression pattern (mutual information value=0.824677) with  --  AT4G00810
81 AT3G13230  --  has similar expression pattern (mutual information value=0.908534) with  --  NRP1  --  has similar expression pattern (mutual information value=0.84858) with  --  NDPK1
82 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=1.07166) with  --  AT2G05140
83 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=1.07166) with  --  AT2G37690
84 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=0.839122) with  --  AT1G80720
85 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=1.15198) with  --  AT1G26740
86 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=0.883064) with  --  DECOY
87 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=1.04772) with  --  EMB1860; TIM50
88 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=0.963946) with  --  AT3G18760
89 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=0.964082) with  --  AT2G34050
90 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=0.892083) with  --  AR192
91 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=1.05745) with  --  RRP41
92 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=1.08871) with  --  ATPHB3; PHB3
93 AT3G13230  --  has similar expression pattern (mutual information value=1.1318) with  --  AT3G23620  --  has similar expression pattern (mutual information value=0.910639) with  --  ATMSI1; MEE70; MSI1
94 AT3G13230  --  has similar expression pattern (mutual information value=0.931534) with  --  STRS1  --  has similar expression pattern (mutual information value=0.820966) with  --  AT1G13030
95 AT3G13230  --  has similar expression pattern (mutual information value=0.931534) with  --  STRS1  --  has similar expression pattern (mutual information value=0.868416) with  --  AT3G57490
96 AT3G13230  --  has similar expression pattern (mutual information value=0.931534) with  --  STRS1  --  has similar expression pattern (mutual information value=0.82652) with  --  AT5G05990
97 AT3G13230  --  has similar expression pattern (mutual information value=0.931534) with  --  STRS1  --  has similar expression pattern (mutual information value=0.82979) with  --  AT5G15810
98 AT3G13230  --  has similar expression pattern (mutual information value=1.00276) with  --  AT4G12600  --  has similar expression pattern (mutual information value=0.814621) with  --  AT1G54770
99 AT3G13230  --  has similar expression pattern (mutual information value=1.00276) with  --  AT4G12600  --  has similar expression pattern (mutual information value=0.98803) with  --  AT1G73230
100 AT3G13230  --  has similar expression pattern (mutual information value=1.00276) with  --  AT4G12600  --  has similar expression pattern (mutual information value=1.1262) with  --  AT4G13170
101 AT3G13230  --  has similar expression pattern (mutual information value=1.00276) with  --  AT4G12600  --  has similar expression pattern (mutual information value=0.913156) with  --  AT4G20020
102 AT3G13230  --  has similar expression pattern (mutual information value=1.00276) with  --  AT4G12600  --  has similar expression pattern (mutual information value=1.10133) with  --  AT4G39300
103 AT3G13230  --  has similar expression pattern (mutual information value=1.00276) with  --  AT4G12600  --  has similar expression pattern (mutual information value=1.18966) with  --  PYRD
104 AT3G13230  --  has similar expression pattern (mutual information value=1.00276) with  --  AT4G12600  --  has similar expression pattern (mutual information value=1.18387) with  --  AT5G52650
105 AT3G13230  --  has similar expression pattern (mutual information value=1.00276) with  --  AT4G12600  --  has similar expression pattern (mutual information value=1.0403) with  --  AT4G15640
106 AT3G13230  --  has similar expression pattern (mutual information value=0.907153) with  --  AT3G45030  --  has similar expression pattern (mutual information value=0.947811) with  --  AT2G37190
107 AT3G13230  --  has similar expression pattern (mutual information value=0.907153) with  --  AT3G45030  --  has similar expression pattern (mutual information value=0.911234) with  --  AT2G36160
108 AT3G13230  --  has similar expression pattern (mutual information value=0.907153) with  --  AT3G45030  --  has similar expression pattern (mutual information value=1.03185) with  --  emb2386
109 AT3G13230  --  has similar expression pattern (mutual information value=0.907153) with  --  AT3G45030  --  has similar expression pattern (mutual information value=0.994198) with  --  AT3G04920
110 AT3G13230  --  has similar expression pattern (mutual information value=0.907153) with  --  AT3G45030  --  has similar expression pattern (mutual information value=0.993636) with  --  AT3G02560
111 AT3G13230  --  has similar expression pattern (mutual information value=0.907153) with  --  AT3G45030  --  has similar expression pattern (mutual information value=0.936902) with  --  AT5G19510
112 AT3G13230  --  has similar expression pattern (mutual information value=1.05282) with  --  AT5G60990  --  has similar expression pattern (mutual information value=0.832882) with  --  AT1G60080
113 AT3G13230  --  has similar expression pattern (mutual information value=0.910158) with  --  AT5G61170  --  has similar expression pattern (mutual information value=1.83189) with  --  AT3G04840
114 AT3G13230  --  has similar expression pattern (mutual information value=0.910158) with  --  AT5G61170  --  has similar expression pattern (mutual information value=1.21416) with  --  RACK1B; RACK1B_AT
115 AT3G13230  --  has similar expression pattern (mutual information value=0.910158) with  --  AT5G61170  --  has similar expression pattern (mutual information value=1.22002) with  --  AT5G59850
116 AT3G13230  --  has similar expression pattern (mutual information value=0.987423) with  --  AT5G20160  --  has similar expression pattern (mutual information value=0.976472) with  --  AT1G67620
117 AT3G13230  --  has similar expression pattern (mutual information value=0.987423) with  --  AT5G20160  --  has similar expression pattern (mutual information value=0.853987) with  --  AT3G02190
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