Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G04800
Type: Protein GRN ID: np38801 Name:
Annotation: Ribosomal S17 family protein
Gene Locus: AT5G04800
Gene Expression (Affy ATH1 probeset): 250862_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G04800  --  has similar expression pattern (mutual information value=1.20042) with  --  ATRPL23A; RPL23A; RPL23AA
3 AT5G04800  --  has similar expression pattern (mutual information value=1.09441) with  --  AT1G27400
4 AT5G04800  --  has similar expression pattern (mutual information value=1.41786) with  --  AT1G67430
5 AT5G04800  --  has similar expression pattern (mutual information value=1.44728) with  --  AT1G26880
6 AT5G04800  --  has similar expression pattern (mutual information value=1.11661) with  --  AT1G01100
7 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110
8 AT5G04800  --  has similar expression pattern (mutual information value=1.13518) with  --  AT3G09680
9 AT5G04800  --  has similar expression pattern (mutual information value=1.13518) with  --  AT5G02960
10 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080
11 AT5G04800  --  has similar expression pattern (mutual information value=1.18919) with  --  AT3G53430
12 AT5G04800  --  has similar expression pattern (mutual information value=1.30002) with  --  AT3G56340
13 AT5G04800  --  has similar expression pattern (mutual information value=1.38663) with  --  AT5G47930
14 AT5G04800  --  has similar expression pattern (mutual information value=1.2778) with  --  AT5G16130
15 AT5G04800  --  has similar expression pattern (mutual information value=1.20042) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.00699) with  --  AT2G19750
16 AT5G04800  --  has similar expression pattern (mutual information value=1.20042) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.36054) with  --  AT2G27710
17 AT5G04800  --  has similar expression pattern (mutual information value=1.20042) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.28593) with  --  AT3G04840
18 AT5G04800  --  has similar expression pattern (mutual information value=1.20042) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.03879) with  --  AT3G28900
19 AT5G04800  --  has similar expression pattern (mutual information value=1.20042) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.05345) with  --  AT3G22230
20 AT5G04800  --  has similar expression pattern (mutual information value=1.20042) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=0.935448) with  --  AT4G13720
21 AT5G04800  --  has similar expression pattern (mutual information value=1.20042) with  --  ATRPL23A; RPL23A; RPL23AA  --  has similar expression pattern (mutual information value=1.42315) with  --  AT5G61170
22 AT5G04800  --  has similar expression pattern (mutual information value=1.09441) with  --  AT1G27400  --  has similar expression pattern (mutual information value=1.10388) with  --  NOP56
23 AT5G04800  --  has similar expression pattern (mutual information value=1.09441) with  --  AT1G27400  --  has similar expression pattern (mutual information value=1.06076) with  --  AT3G05560
24 AT5G04800  --  has similar expression pattern (mutual information value=1.09441) with  --  AT1G27400  --  has similar expression pattern (mutual information value=1.09747) with  --  AT3G04920
25 AT5G04800  --  has similar expression pattern (mutual information value=1.09441) with  --  AT1G27400  --  has similar expression pattern (mutual information value=1.16062) with  --  AtGRP4; GR-RBP4; GRP4
26 AT5G04800  --  has similar expression pattern (mutual information value=1.09441) with  --  AT1G27400  --  has similar expression pattern (mutual information value=1.1538) with  --  AT4G29410
27 AT5G04800  --  has similar expression pattern (mutual information value=1.09441) with  --  AT1G27400  --  has similar expression pattern (mutual information value=1.08584) with  --  AT3G44590
28 AT5G04800  --  has similar expression pattern (mutual information value=1.09441) with  --  AT1G27400  --  has similar expression pattern (mutual information value=0.958612) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1
29 AT5G04800  --  has similar expression pattern (mutual information value=1.09441) with  --  AT1G27400  --  has similar expression pattern (mutual information value=1.1169) with  --  AT4G16720
30 AT5G04800  --  has similar expression pattern (mutual information value=1.41786) with  --  AT1G67430  --  interacts with  --  OBE1
31 AT5G04800  --  has similar expression pattern (mutual information value=1.41786) with  --  AT1G67430  --  has similar expression pattern (mutual information value=1.47173) with  --  AT2G27720
32 AT5G04800  --  has similar expression pattern (mutual information value=1.41786) with  --  AT1G67430  --  has similar expression pattern (mutual information value=1.17165) with  --  AT1G77940
33 AT5G04800  --  has similar expression pattern (mutual information value=1.41786) with  --  AT1G67430  --  has similar expression pattern (mutual information value=1.07118) with  --  AT3G01790
34 AT5G04800  --  has similar expression pattern (mutual information value=1.41786) with  --  AT1G67430  --  has similar expression pattern (mutual information value=1.082) with  --  AT5G02450
35 AT5G04800  --  has similar expression pattern (mutual information value=1.44728) with  --  AT1G26880  --  interacts with  --  AHL29; SOB3
36 AT5G04800  --  has similar expression pattern (mutual information value=1.44728) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.40094) with  --  RPL27A; RPL27AB
37 AT5G04800  --  has similar expression pattern (mutual information value=1.44728) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.03638) with  --  AT1G26750
38 AT5G04800  --  has similar expression pattern (mutual information value=1.44728) with  --  AT1G26880  --  has similar expression pattern (mutual information value=0.944632) with  --  AT3G13230
39 AT5G04800  --  has similar expression pattern (mutual information value=1.44728) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.05834) with  --  AT3G45030
40 AT5G04800  --  has similar expression pattern (mutual information value=1.44728) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.02787) with  --  AT5G02610
41 AT5G04800  --  has similar expression pattern (mutual information value=1.44728) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.21388) with  --  AT5G56670
42 AT5G04800  --  has similar expression pattern (mutual information value=1.44728) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.15876) with  --  AT5G60670
43 AT5G04800  --  has similar expression pattern (mutual information value=1.44728) with  --  AT1G26880  --  has similar expression pattern (mutual information value=1.03623) with  --  AT4G36420
44 AT5G04800  --  has similar expression pattern (mutual information value=1.11661) with  --  AT1G01100  --  interacts with  --  AT2G40010
45 AT5G04800  --  has similar expression pattern (mutual information value=1.11661) with  --  AT1G01100  --  has similar expression pattern (mutual information value=1.29296) with  --  AT5G18380
46 AT5G04800  --  has similar expression pattern (mutual information value=1.11661) with  --  AT1G01100  --  has similar expression pattern (mutual information value=0.956707) with  --  EDA27; NOP10
47 AT5G04800  --  has similar expression pattern (mutual information value=1.11661) with  --  AT1G01100  --  has similar expression pattern (mutual information value=0.995267) with  --  emb2171
48 AT5G04800  --  has similar expression pattern (mutual information value=1.11661) with  --  AT1G01100  --  has similar expression pattern (mutual information value=0.82453) with  --  AT2G40510
49 AT5G04800  --  has similar expression pattern (mutual information value=1.11661) with  --  AT1G01100  --  has similar expression pattern (mutual information value=0.82453) with  --  AT2G40590
50 AT5G04800  --  has similar expression pattern (mutual information value=1.11661) with  --  AT1G01100  --  has similar expression pattern (mutual information value=1.22233) with  --  RPL16B
51 AT5G04800  --  has similar expression pattern (mutual information value=1.11661) with  --  AT1G01100  --  has similar expression pattern (mutual information value=1.22233) with  --  AT5G45775
52 AT5G04800  --  has similar expression pattern (mutual information value=1.11661) with  --  AT1G01100  --  has similar expression pattern (mutual information value=1.03285) with  --  AT5G27700
53 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.23419) with  --  AT2G42910
54 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.54842) with  --  RPL24A
55 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.16202) with  --  EMB2762
56 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.32218) with  --  TOM6
57 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.11796) with  --  AT1G80750
58 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.26716) with  --  AT1G55890
59 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.15584) with  --  AP40; P40; RP40; RPSAA
60 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.06565) with  --  AT1G73230
61 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.01511) with  --  RPS2
62 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.14318) with  --  RPS10
63 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.0476) with  --  CARA; VEN6
64 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.24395) with  --  AT3G11250
65 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.24341) with  --  AT2G33370
66 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.3826) with  --  AT4G12600
67 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.36382) with  --  AT4G25740
68 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.25083) with  --  AT3G60770
69 AT5G04800  --  has similar expression pattern (mutual information value=1.30271) with  --  AT3G07110  --  has similar expression pattern (mutual information value=1.27193) with  --  AT5G52650
70 AT5G04800  --  has similar expression pattern (mutual information value=1.13518) with  --  AT3G09680  --  has similar expression pattern (mutual information value=1.19161) with  --  AT4G36130
71 AT5G04800  --  has similar expression pattern (mutual information value=1.13518) with  --  AT3G09680  --  has similar expression pattern (mutual information value=1.06917) with  --  AT2G43460
72 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080  --  has similar expression pattern (mutual information value=1.08841) with  --  PGY1
73 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080  --  has similar expression pattern (mutual information value=1.07691) with  --  AT1G08360
74 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080  --  has similar expression pattern (mutual information value=1.24248) with  --  AT3G55750
75 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080  --  has similar expression pattern (mutual information value=1.24248) with  --  AT1G41880
76 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080  --  has similar expression pattern (mutual information value=1.0944) with  --  AT1G29250
77 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080  --  has similar expression pattern (mutual information value=0.947571) with  --  AT4G18100
78 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080  --  has similar expression pattern (mutual information value=1.09753) with  --  AT3G43980
79 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080  --  has similar expression pattern (mutual information value=1.09753) with  --  AT3G44010
80 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080  --  has similar expression pattern (mutual information value=1.38376) with  --  AT5G03850
81 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080  --  has similar expression pattern (mutual information value=1.04664) with  --  ATRBP45A; RBP45A
82 AT5G04800  --  has similar expression pattern (mutual information value=1.17209) with  --  EMB1080  --  has similar expression pattern (mutual information value=1.09309) with  --  ATEBP1; ATG2; EBP1
83 AT5G04800  --  has similar expression pattern (mutual information value=1.18919) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.10146) with  --  emb2386
84 AT5G04800  --  has similar expression pattern (mutual information value=1.18919) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.11785) with  --  AT1G33120
85 AT5G04800  --  has similar expression pattern (mutual information value=1.18919) with  --  AT3G53430  --  has similar expression pattern (mutual information value=0.904201) with  --  AT1G74050
86 AT5G04800  --  has similar expression pattern (mutual information value=1.18919) with  --  AT3G53430  --  has similar expression pattern (mutual information value=0.894797) with  --  NRP1
87 AT5G04800  --  has similar expression pattern (mutual information value=1.18919) with  --  AT3G53430  --  has similar expression pattern (mutual information value=0.880698) with  --  smB
88 AT5G04800  --  has similar expression pattern (mutual information value=1.18919) with  --  AT3G53430  --  has similar expression pattern (mutual information value=0.876764) with  --  AT4G39880
89 AT5G04800  --  has similar expression pattern (mutual information value=1.18919) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  AT1G58983
90 AT5G04800  --  has similar expression pattern (mutual information value=1.18919) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  AT1G59359
91 AT5G04800  --  has similar expression pattern (mutual information value=1.18919) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  AT1G58684
92 AT5G04800  --  has similar expression pattern (mutual information value=1.18919) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  XW6
93 AT5G04800  --  has similar expression pattern (mutual information value=1.30002) with  --  AT3G56340  --  has similar expression pattern (mutual information value=1.14202) with  --  AT3G09500
94 AT5G04800  --  has similar expression pattern (mutual information value=1.30002) with  --  AT3G56340  --  has similar expression pattern (mutual information value=1.41059) with  --  AT3G53890
95 AT5G04800  --  has similar expression pattern (mutual information value=1.30002) with  --  AT3G56340  --  has similar expression pattern (mutual information value=1.1005) with  --  AT5G09510
96 AT5G04800  --  has similar expression pattern (mutual information value=1.38663) with  --  AT5G47930  --  has similar expression pattern (mutual information value=0.813601) with  --  ATO1; TO1
97 AT5G04800  --  has similar expression pattern (mutual information value=1.38663) with  --  AT5G47930  --  has similar expression pattern (mutual information value=0.927307) with  --  emb1129
98 AT5G04800  --  has similar expression pattern (mutual information value=1.38663) with  --  AT5G47930  --  has similar expression pattern (mutual information value=1.3315) with  --  AT4G33865
99 AT5G04800  --  has similar expression pattern (mutual information value=1.2778) with  --  AT5G16130  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
100 AT5G04800  --  has similar expression pattern (mutual information value=1.2778) with  --  AT5G16130  --  has similar expression pattern (mutual information value=1.1392) with  --  RPS15
101 AT5G04800  --  has similar expression pattern (mutual information value=1.2778) with  --  AT5G16130  --  has similar expression pattern (mutual information value=1.26789) with  --  RACK1B; RACK1B_AT
102 AT5G04800  --  has similar expression pattern (mutual information value=1.2778) with  --  AT5G16130  --  has similar expression pattern (mutual information value=0.812393) with  --  ATIMPALPHA3; IMPA-3; MOS6
103 AT5G04800  --  has similar expression pattern (mutual information value=1.2778) with  --  AT5G16130  --  has similar expression pattern (mutual information value=0.817182) with  --  AT5G10010
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact