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Location:  Home > Details for node AT4G39880
Type: Protein GRN ID: np34588 Name:
Annotation: Ribosomal protein L23/L15e family protein
Gene Locus: AT4G39880
Gene Expression (Affy ATH1 probeset): 252850_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G39880  --  has similar expression pattern (mutual information value=0.853365) with  --  TOM20-2
3 AT4G39880  --  has similar expression pattern (mutual information value=0.922864) with  --  AT4G00810
4 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450
5 AT4G39880  --  has similar expression pattern (mutual information value=0.854509) with  --  AT4G13170
6 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430
7 AT4G39880  --  has similar expression pattern (mutual information value=0.922864) with  --  AT4G00810  --  has similar expression pattern (mutual information value=1.20102) with  --  AT2G27710
8 AT4G39880  --  has similar expression pattern (mutual information value=0.922864) with  --  AT4G00810  --  has similar expression pattern (mutual information value=0.824677) with  --  NRP1
9 AT4G39880  --  has similar expression pattern (mutual information value=0.922864) with  --  AT4G00810  --  has similar expression pattern (mutual information value=1.06967) with  --  AT1G18540
10 AT4G39880  --  has similar expression pattern (mutual information value=0.922864) with  --  AT4G00810  --  has similar expression pattern (mutual information value=1.18221) with  --  NDPK1
11 AT4G39880  --  has similar expression pattern (mutual information value=0.922864) with  --  AT4G00810  --  has similar expression pattern (mutual information value=0.887033) with  --  AT4G13720
12 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.862254) with  --  AT2G42710
13 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.808364) with  --  ATRH53; PMH2
14 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.808364) with  --  ATRH9; PMH1
15 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.921852) with  --  ATL5; OLI5; PGY3; RPL5A
16 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.983009) with  --  ATGRP2; GR-RBP2; GRP2
17 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.993136) with  --  HAP6
18 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.813169) with  --  AT4G28360
19 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.813169) with  --  AT1G52370
20 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=1.11484) with  --  AT5G41520
21 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=1.20387) with  --  AT5G48760
22 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.879928) with  --  AT5G27120
23 AT4G39880  --  has similar expression pattern (mutual information value=0.881812) with  --  AT4G10450  --  has similar expression pattern (mutual information value=0.879928) with  --  AT5G27140
24 AT4G39880  --  has similar expression pattern (mutual information value=0.854509) with  --  AT4G13170  --  has similar expression pattern (mutual information value=1.05635) with  --  AT1G73230
25 AT4G39880  --  has similar expression pattern (mutual information value=0.854509) with  --  AT4G13170  --  has similar expression pattern (mutual information value=1.27185) with  --  AT3G04840
26 AT4G39880  --  has similar expression pattern (mutual information value=0.854509) with  --  AT4G13170  --  has similar expression pattern (mutual information value=1.1262) with  --  AT4G12600
27 AT4G39880  --  has similar expression pattern (mutual information value=0.854509) with  --  AT4G13170  --  has similar expression pattern (mutual information value=1.12962) with  --  AT4G25740
28 AT4G39880  --  has similar expression pattern (mutual information value=0.854509) with  --  AT4G13170  --  has similar expression pattern (mutual information value=1.09828) with  --  AT5G10920
29 AT4G39880  --  has similar expression pattern (mutual information value=0.854509) with  --  AT4G13170  --  has similar expression pattern (mutual information value=1.27858) with  --  AT5G61170
30 AT4G39880  --  has similar expression pattern (mutual information value=0.854509) with  --  AT4G13170  --  has similar expression pattern (mutual information value=1.08144) with  --  AT5G27820
31 AT4G39880  --  has similar expression pattern (mutual information value=0.854509) with  --  AT4G13170  --  has similar expression pattern (mutual information value=1.33787) with  --  AT5G16130
32 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  AT1G70600
33 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.25458) with  --  RPL27A; RPL27AB
34 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.10146) with  --  emb2386
35 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.08399) with  --  NOP56
36 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=0.904201) with  --  AT1G74050
37 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.34902) with  --  AT1G34030
38 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.27455) with  --  AT5G45775
39 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=0.880698) with  --  smB
40 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.37059) with  --  AT3G56340
41 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.18919) with  --  AT2G05220
42 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.18919) with  --  AT5G04800
43 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.18919) with  --  AT2G04390
44 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  AT1G58983
45 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  AT1G59359
46 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  AT1G58684
47 AT4G39880  --  has similar expression pattern (mutual information value=0.876764) with  --  AT3G53430  --  has similar expression pattern (mutual information value=1.02501) with  --  XW6
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