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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node BIR6
Type: Protein GRN ID: np25937 Name: BIR6
Annotation: Pentatricopeptide repeat (PPR) superfamily protein
Gene Locus: AT3G48250
Gene Expression (Affy ATH1 probeset): 252355_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 BIR6  --  has similar expression pattern (mutual information value=0.906346) with  --  LOJ
3 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775
4 BIR6  --  has similar expression pattern (mutual information value=0.87952) with  --  AT1G61990
5 BIR6  --  has similar expression pattern (mutual information value=0.88522) with  --  AT2G37020
6 BIR6  --  has similar expression pattern (mutual information value=0.818448) with  --  EMB2217
7 BIR6  --  has similar expression pattern (mutual information value=0.882988) with  --  AT1G13030
8 BIR6  --  has similar expression pattern (mutual information value=0.830465) with  --  AT1G71840
9 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940
10 BIR6  --  has similar expression pattern (mutual information value=0.821412) with  --  AT3G19440
11 BIR6  --  has similar expression pattern (mutual information value=0.848879) with  --  AT3G13150
12 BIR6  --  has similar expression pattern (mutual information value=1.00937) with  --  AT3G20240
13 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020
14 BIR6  --  has similar expression pattern (mutual information value=1.04097) with  --  AR192
15 BIR6  --  has similar expression pattern (mutual information value=0.804281) with  --  AT4G38150
16 BIR6  --  has similar expression pattern (mutual information value=0.982528) with  --  AT3G63090
17 BIR6  --  has similar expression pattern (mutual information value=0.948676) with  --  AT5G05990
18 BIR6  --  has similar expression pattern (mutual information value=0.962566) with  --  AT5G42150
19 BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580
20 BIR6  --  has similar expression pattern (mutual information value=0.927862) with  --  AT5G15750
21 BIR6  --  has similar expression pattern (mutual information value=0.906346) with  --  LOJ  --  has similar expression pattern (mutual information value=0.828219) with  --  AT3G53940
22 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775  --  has similar expression pattern (mutual information value=1.16649) with  --  AT2G45710
23 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775  --  has similar expression pattern (mutual information value=1.07732) with  --  AT1G02870
24 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775  --  has similar expression pattern (mutual information value=0.888796) with  --  AT1G80720
25 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775  --  has similar expression pattern (mutual information value=1.26766) with  --  AT1G28395
26 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775  --  has similar expression pattern (mutual information value=1.14424) with  --  AT1G26740
27 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775  --  has similar expression pattern (mutual information value=0.932891) with  --  ATWHY2; WHY2
28 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775  --  has similar expression pattern (mutual information value=1.05981) with  --  AT3G23620
29 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775  --  has similar expression pattern (mutual information value=1.01154) with  --  AT3G18760
30 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775  --  has similar expression pattern (mutual information value=0.989974) with  --  AT5G11630
31 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775  --  has similar expression pattern (mutual information value=1.04829) with  --  AT5G60990
32 BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775  --  has similar expression pattern (mutual information value=1.16154) with  --  AT5G20160
33 BIR6  --  has similar expression pattern (mutual information value=0.88522) with  --  AT2G37020  --  interacts with  --  AT1G80150
34 BIR6  --  has similar expression pattern (mutual information value=0.88522) with  --  AT2G37020  --  interacts with  --  ARR14
35 BIR6  --  has similar expression pattern (mutual information value=0.88522) with  --  AT2G37020  --  interacts with  --  ATCB5LP; B5 #5; CB5LP
36 BIR6  --  has similar expression pattern (mutual information value=0.88522) with  --  AT2G37020  --  interacts with  --  GDC1; LTD
37 BIR6  --  has similar expression pattern (mutual information value=0.818448) with  --  EMB2217  --  has similar expression pattern (mutual information value=0.810641) with  --  AT2G43770
38 BIR6  --  has similar expression pattern (mutual information value=0.818448) with  --  EMB2217  --  has similar expression pattern (mutual information value=0.815048) with  --  NRPA2
39 BIR6  --  has similar expression pattern (mutual information value=0.818448) with  --  EMB2217  --  has similar expression pattern (mutual information value=0.816742) with  --  AT3G07750
40 BIR6  --  has similar expression pattern (mutual information value=0.818448) with  --  EMB2217  --  has similar expression pattern (mutual information value=0.80915) with  --  AT5G12220
41 BIR6  --  has similar expression pattern (mutual information value=0.818448) with  --  EMB2217  --  has similar expression pattern (mutual information value=0.810224) with  --  AtNUFIP; NUFIP
42 BIR6  --  has similar expression pattern (mutual information value=0.818448) with  --  EMB2217  --  is the target gene of  --  ath-miR5645c
43 BIR6  --  has similar expression pattern (mutual information value=0.882988) with  --  AT1G13030  --  interacts with  --  ATG8B
44 BIR6  --  has similar expression pattern (mutual information value=0.882988) with  --  AT1G13030  --  interacts with  --  OPR3
45 BIR6  --  has similar expression pattern (mutual information value=0.882988) with  --  AT1G13030  --  interacts with  --  ARR5
46 BIR6  --  has similar expression pattern (mutual information value=0.882988) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G04590
47 BIR6  --  has similar expression pattern (mutual information value=0.882988) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.938743) with  --  EMB1860; TIM50
48 BIR6  --  has similar expression pattern (mutual information value=0.882988) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.933013) with  --  AT3G09700
49 BIR6  --  has similar expression pattern (mutual information value=0.882988) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.820966) with  --  STRS1
50 BIR6  --  has similar expression pattern (mutual information value=0.882988) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.995702) with  --  RRP41
51 BIR6  --  has similar expression pattern (mutual information value=0.882988) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.87292) with  --  AT5G64680
52 BIR6  --  has similar expression pattern (mutual information value=0.830465) with  --  AT1G71840  --  interacts with  --  RPL10B
53 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  interacts with  --  AT3G21490
54 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  interacts with  --  AT3G15420
55 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  interacts with  --  AT1G79070
56 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.942121) with  --  AT1G63250
57 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.942121) with  --  AT2G07750
58 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.936368) with  --  AT2G37990
59 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.865246) with  --  AT2G37400
60 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.912198) with  --  AT2G31240
61 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.895343) with  --  AT1G18850
62 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.829907) with  --  AT1G04945
63 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.893942) with  --  PPR596
64 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.968116) with  --  AT1G52930
65 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.942047) with  --  AAC42; ATRPAC42
66 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.853898) with  --  AT4G27380
67 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.966821) with  --  AT4G28450
68 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.906928) with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
69 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=1.03742) with  --  AT3G55605
70 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.84891) with  --  ATRH25; STRS2
71 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.917642) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
72 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.803702) with  --  AT5G61220
73 BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.839937) with  --  AT1G30240
74 BIR6  --  has similar expression pattern (mutual information value=0.821412) with  --  AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355
75 BIR6  --  has similar expression pattern (mutual information value=0.821412) with  --  AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940
76 BIR6  --  has similar expression pattern (mutual information value=0.821412) with  --  AT3G19440  --  has similar expression pattern (mutual information value=0.905489) with  --  RBL
77 BIR6  --  has similar expression pattern (mutual information value=0.848879) with  --  AT3G13150  --  has similar expression pattern (mutual information value=0.826123) with  --  AT1G67620
78 BIR6  --  has similar expression pattern (mutual information value=0.848879) with  --  AT3G13150  --  has similar expression pattern (mutual information value=0.814327) with  --  AT1G71430
79 BIR6  --  has similar expression pattern (mutual information value=0.848879) with  --  AT3G13150  --  has similar expression pattern (mutual information value=0.848896) with  --  AT5G13830
80 BIR6  --  has similar expression pattern (mutual information value=0.848879) with  --  AT3G13150  --  has similar expression pattern (mutual information value=0.814014) with  --  AT5G47455
81 BIR6  --  has similar expression pattern (mutual information value=0.848879) with  --  AT3G13150  --  has similar expression pattern (mutual information value=0.879039) with  --  AT5G26180
82 BIR6  --  has similar expression pattern (mutual information value=1.00937) with  --  AT3G20240  --  has similar expression pattern (mutual information value=0.969647) with  --  EMB3108
83 BIR6  --  has similar expression pattern (mutual information value=1.00937) with  --  AT3G20240  --  has similar expression pattern (mutual information value=0.911333) with  --  AT1G48460
84 BIR6  --  has similar expression pattern (mutual information value=1.00937) with  --  AT3G20240  --  has similar expression pattern (mutual information value=0.933594) with  --  AT3G15460
85 BIR6  --  has similar expression pattern (mutual information value=1.00937) with  --  AT3G20240  --  has similar expression pattern (mutual information value=0.837797) with  --  AT3G59840
86 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  AT1G06790
87 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  AT3G06790
88 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  AT1G32580
89 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  AT3G15000
90 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  AT1G11430
91 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  AT1G72530
92 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  AT2G35240
93 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  AT5G44780
94 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  DAL; DAL1
95 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  MEF19
96 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  MEF21
97 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  MEF9
98 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  interacts with  --  MEF1
99 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.837359) with  --  AT1G07830
100 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.888755) with  --  MEE49
101 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.913156) with  --  AT4G12600
102 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.975438) with  --  AT4G28200
103 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.956689) with  --  AT4G39300
104 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.91246) with  --  RID3
105 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.852468) with  --  AT3G49990
106 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.857003) with  --  AT3G51010
107 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.968922) with  --  AT3G61100
108 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.812334) with  --  AT5G06360
109 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.955642) with  --  PYRD
110 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.885334) with  --  AT5G39850
111 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.897242) with  --  ATMSI1; MEE70; MSI1
112 BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.815995) with  --  emb2473; MIRO1
113 BIR6  --  has similar expression pattern (mutual information value=1.04097) with  --  AR192  --  interacts with  --  CLA; CLA1; DEF; DXPS2; DXS
114 BIR6  --  has similar expression pattern (mutual information value=1.04097) with  --  AR192  --  has similar expression pattern (mutual information value=0.984111) with  --  AT2G18330
115 BIR6  --  has similar expression pattern (mutual information value=1.04097) with  --  AR192  --  has similar expression pattern (mutual information value=0.98591) with  --  NFD6
116 BIR6  --  has similar expression pattern (mutual information value=1.04097) with  --  AR192  --  has similar expression pattern (mutual information value=1.04515) with  --  ATPHB6; PHB6
117 BIR6  --  has similar expression pattern (mutual information value=1.04097) with  --  AR192  --  has similar expression pattern (mutual information value=1.04515) with  --  ATPHB1; PHB1
118 BIR6  --  has similar expression pattern (mutual information value=1.04097) with  --  AR192  --  has similar expression pattern (mutual information value=0.851967) with  --  AT3G57490
119 BIR6  --  has similar expression pattern (mutual information value=1.04097) with  --  AR192  --  has similar expression pattern (mutual information value=0.96636) with  --  AT5G02050
120 BIR6  --  has similar expression pattern (mutual information value=0.804281) with  --  AT4G38150  --  interacts with  --  AT1G71480
121 BIR6  --  has similar expression pattern (mutual information value=0.982528) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.869481) with  --  CDC48B
122 BIR6  --  has similar expression pattern (mutual information value=0.982528) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.873455) with  --  AT1G15420
123 BIR6  --  has similar expression pattern (mutual information value=0.948676) with  --  AT5G05990  --  has similar expression pattern (mutual information value=0.867948) with  --  AT3G12370
124 BIR6  --  has similar expression pattern (mutual information value=0.948676) with  --  AT5G05990  --  has similar expression pattern (mutual information value=0.958217) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1
125 BIR6  --  has similar expression pattern (mutual information value=0.948676) with  --  AT5G05990  --  has similar expression pattern (mutual information value=0.82156) with  --  AT4G31210
126 BIR6  --  has similar expression pattern (mutual information value=0.962566) with  --  AT5G42150  --  has similar expression pattern (mutual information value=0.822045) with  --  AT1G70350
127 BIR6  --  has similar expression pattern (mutual information value=0.962566) with  --  AT5G42150  --  has similar expression pattern (mutual information value=0.807842) with  --  Y14
128 BIR6  --  has similar expression pattern (mutual information value=0.962566) with  --  AT5G42150  --  has similar expression pattern (mutual information value=0.822355) with  --  PBD1; PRCGB
129 BIR6  --  has similar expression pattern (mutual information value=0.962566) with  --  AT5G42150  --  has similar expression pattern (mutual information value=0.806338) with  --  ABC1; ATABC1; ATATH10
130 BIR6  --  has similar expression pattern (mutual information value=0.962566) with  --  AT5G42150  --  has similar expression pattern (mutual information value=0.815585) with  --  AT5G40530
131 BIR6  --  has similar expression pattern (mutual information value=0.962566) with  --  AT5G42150  --  has similar expression pattern (mutual information value=1.02526) with  --  ATPHB3; PHB3
132 BIR6  --  has similar expression pattern (mutual information value=0.962566) with  --  AT5G42150  --  has similar expression pattern (mutual information value=0.805787) with  --  NRPB12; NRPD12; NRPE12
133 BIR6  --  has similar expression pattern (mutual information value=0.962566) with  --  AT5G42150  --  has product (in catalytic reaction)  --  Prostaglandin E2
134 BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.832071) with  --  AT1G28530
135 BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580  --  interacts with  --  AT5G53060
136 BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580  --  interacts with  --  At-RSZ22a; RSZ22a
137 BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580  --  interacts with  --  AJH2; CSN5; CSN5B
138 BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580  --  interacts with  --  AT5G46190
139 BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580  --  interacts with  --  AT3G21215
140 BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580  --  interacts with  --  AT2G33550
141 BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580  --  interacts with  --  AT1G09660
142 BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580  --  interacts with  --  LSU1
143 BIR6  --  has similar expression pattern (mutual information value=0.927862) with  --  AT5G15750  --  has similar expression pattern (mutual information value=1.06758) with  --  AT2G44860
144 BIR6  --  has similar expression pattern (mutual information value=0.927862) with  --  AT5G15750  --  has similar expression pattern (mutual information value=0.879427) with  --  AT2G46230
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