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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G63090
Type: Protein GRN ID: np28688 Name:
Annotation: Ubiquitin carboxyl-terminal hydrolase family protein
Gene Locus: AT3G63090
Gene Expression (Affy ATH1 probeset): 251206_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G63090  --  has similar expression pattern (mutual information value=0.869481) with  --  CDC48B
3 AT3G63090  --  has similar expression pattern (mutual information value=0.840559) with  --  EMB2217
4 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030
5 AT3G63090  --  has similar expression pattern (mutual information value=0.873455) with  --  AT1G15420
6 AT3G63090  --  has similar expression pattern (mutual information value=0.847962) with  --  AT1G71430
7 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020
8 AT3G63090  --  has similar expression pattern (mutual information value=0.85795) with  --  AT4G38150
9 AT3G63090  --  has similar expression pattern (mutual information value=0.982528) with  --  BIR6
10 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41
11 AT3G63090  --  has similar expression pattern (mutual information value=1.07122) with  --  AT5G12220
12 AT3G63090  --  has similar expression pattern (mutual information value=0.917937) with  --  AT5G15750
13 AT3G63090  --  has similar expression pattern (mutual information value=0.869481) with  --  CDC48B  --  interacts with  --  GUT15
14 AT3G63090  --  has similar expression pattern (mutual information value=0.869481) with  --  CDC48B  --  interacts with  --  AT2G18860
15 AT3G63090  --  has similar expression pattern (mutual information value=0.869481) with  --  CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2
16 AT3G63090  --  has similar expression pattern (mutual information value=0.869481) with  --  CDC48B  --  interacts with  --  ATG8F
17 AT3G63090  --  has similar expression pattern (mutual information value=0.869481) with  --  CDC48B  --  interacts with  --  EMB3137
18 AT3G63090  --  has similar expression pattern (mutual information value=0.869481) with  --  CDC48B  --  has similar expression pattern (mutual information value=0.823823) with  --  AT2G01640
19 AT3G63090  --  has similar expression pattern (mutual information value=0.869481) with  --  CDC48B  --  has similar expression pattern (mutual information value=0.891327) with  --  AT5G18770
20 AT3G63090  --  has similar expression pattern (mutual information value=0.840559) with  --  EMB2217  --  has similar expression pattern (mutual information value=0.810641) with  --  AT2G43770
21 AT3G63090  --  has similar expression pattern (mutual information value=0.840559) with  --  EMB2217  --  has similar expression pattern (mutual information value=0.815048) with  --  NRPA2
22 AT3G63090  --  has similar expression pattern (mutual information value=0.840559) with  --  EMB2217  --  has similar expression pattern (mutual information value=0.816742) with  --  AT3G07750
23 AT3G63090  --  has similar expression pattern (mutual information value=0.840559) with  --  EMB2217  --  has similar expression pattern (mutual information value=0.810224) with  --  AtNUFIP; NUFIP
24 AT3G63090  --  has similar expression pattern (mutual information value=0.840559) with  --  EMB2217  --  is the target gene of  --  ath-miR5645c
25 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  interacts with  --  ATG8B
26 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  interacts with  --  OPR3
27 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  interacts with  --  ARR5
28 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G04590
29 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.898218) with  --  AT2G37020
30 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  has similar expression pattern (mutual information value=1.09242) with  --  AT1G71840
31 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.938743) with  --  EMB1860; TIM50
32 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.933013) with  --  AT3G09700
33 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.88671) with  --  AT3G13940
34 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  has similar expression pattern (mutual information value=1.02573) with  --  AT3G18760
35 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.820966) with  --  STRS1
36 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.948179) with  --  AR192
37 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.833618) with  --  AT5G05990
38 AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.87292) with  --  AT5G64680
39 AT3G63090  --  has similar expression pattern (mutual information value=0.873455) with  --  AT1G15420  --  has similar expression pattern (mutual information value=0.931416) with  --  EMB2811; RFC2
40 AT3G63090  --  has similar expression pattern (mutual information value=0.873455) with  --  AT1G15420  --  has similar expression pattern (mutual information value=0.816554) with  --  AT5G06360
41 AT3G63090  --  has similar expression pattern (mutual information value=0.873455) with  --  AT1G15420  --  has similar expression pattern (mutual information value=0.84085) with  --  AT5G13830
42 AT3G63090  --  has similar expression pattern (mutual information value=0.873455) with  --  AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3
43 AT3G63090  --  has similar expression pattern (mutual information value=0.847962) with  --  AT1G71430  --  has similar expression pattern (mutual information value=0.814327) with  --  AT3G13150
44 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  AT1G06790
45 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  AT3G06790
46 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  AT1G32580
47 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  AT3G15000
48 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  AT1G11430
49 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  AT1G72530
50 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  AT2G35240
51 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  AT5G44780
52 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  DAL; DAL1
53 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  MEF19
54 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  MEF21
55 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  MEF9
56 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  interacts with  --  MEF1
57 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.889255) with  --  AT1G61990
58 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.902261) with  --  AT1G02870
59 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.837359) with  --  AT1G07830
60 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=1.17895) with  --  AT1G52930
61 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.966775) with  --  ATWHY2; WHY2
62 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.888755) with  --  MEE49
63 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.913156) with  --  AT4G12600
64 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.975438) with  --  AT4G28200
65 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.956689) with  --  AT4G39300
66 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.91246) with  --  RID3
67 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.852468) with  --  AT3G49990
68 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.857003) with  --  AT3G51010
69 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.968922) with  --  AT3G61100
70 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.955642) with  --  PYRD
71 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.885334) with  --  AT5G39850
72 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.913884) with  --  AT5G42150
73 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=1.06331) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
74 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.897242) with  --  ATMSI1; MEE70; MSI1
75 AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020  --  has similar expression pattern (mutual information value=0.815995) with  --  emb2473; MIRO1
76 AT3G63090  --  has similar expression pattern (mutual information value=0.85795) with  --  AT4G38150  --  has similar expression pattern (mutual information value=0.831985) with  --  AT3G59840
77 AT3G63090  --  has similar expression pattern (mutual information value=0.85795) with  --  AT4G38150  --  interacts with  --  AT1G71480
78 AT3G63090  --  has similar expression pattern (mutual information value=0.982528) with  --  BIR6  --  has similar expression pattern (mutual information value=0.906346) with  --  LOJ
79 AT3G63090  --  has similar expression pattern (mutual information value=0.982528) with  --  BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775
80 AT3G63090  --  has similar expression pattern (mutual information value=0.982528) with  --  BIR6  --  has similar expression pattern (mutual information value=0.821412) with  --  AT3G19440
81 AT3G63090  --  has similar expression pattern (mutual information value=0.982528) with  --  BIR6  --  has similar expression pattern (mutual information value=1.00937) with  --  AT3G20240
82 AT3G63090  --  has similar expression pattern (mutual information value=0.982528) with  --  BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580
83 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  interacts with  --  ATRRP4; RRP4
84 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.886746) with  --  AT2G45710
85 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.878125) with  --  AT2G35790
86 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.871805) with  --  NFD6
87 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.910949) with  --  AT1G80620
88 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.894128) with  --  AT3G01790
89 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=1.05745) with  --  AT3G23620
90 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.809467) with  --  AT3G25545
91 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.873764) with  --  AT1G22270
92 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.856155) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1
93 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.881966) with  --  AT3G60770
94 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.965718) with  --  AT5G18790
95 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.965718) with  --  AT3G06320
96 AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41  --  has similar expression pattern (mutual information value=0.872236) with  --  ATTOM22-V; TOM22-V; TOM9-2
97 AT3G63090  --  has similar expression pattern (mutual information value=0.917937) with  --  AT5G15750  --  has similar expression pattern (mutual information value=1.06758) with  --  AT2G44860
98 AT3G63090  --  has similar expression pattern (mutual information value=0.917937) with  --  AT5G15750  --  has similar expression pattern (mutual information value=0.879427) with  --  AT2G46230
99 AT3G63090  --  has similar expression pattern (mutual information value=0.917937) with  --  AT5G15750  --  has similar expression pattern (mutual information value=0.849719) with  --  NRPB12; NRPD12; NRPE12
100 AT3G63090  --  has similar expression pattern (mutual information value=0.917937) with  --  AT5G15750  --  has similar expression pattern (mutual information value=1.01687) with  --  AT5G60990
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