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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G15420
Type: Protein GRN ID: np16019 Name:
Annotation: CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink).
Gene Locus: AT1G15420
Gene Expression (Affy ATH1 probeset): 262544_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G15420  --  has similar expression pattern (mutual information value=0.883658) with  --  AT2G01640
3 AT1G15420  --  has similar expression pattern (mutual information value=0.931416) with  --  EMB2811; RFC2
4 AT1G15420  --  has similar expression pattern (mutual information value=0.873455) with  --  AT3G63090
5 AT1G15420  --  has similar expression pattern (mutual information value=0.816554) with  --  AT5G06360
6 AT1G15420  --  has similar expression pattern (mutual information value=0.850711) with  --  AT5G12220
7 AT1G15420  --  has similar expression pattern (mutual information value=0.84085) with  --  AT5G13830
8 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3
9 AT1G15420  --  has similar expression pattern (mutual information value=0.883658) with  --  AT2G01640  --  has similar expression pattern (mutual information value=0.823823) with  --  CDC48B
10 AT1G15420  --  has similar expression pattern (mutual information value=0.931416) with  --  EMB2811; RFC2  --  has similar expression pattern (mutual information value=0.819522) with  --  AT1G02870
11 AT1G15420  --  has similar expression pattern (mutual information value=0.931416) with  --  EMB2811; RFC2  --  has similar expression pattern (mutual information value=0.829872) with  --  Y14
12 AT1G15420  --  has similar expression pattern (mutual information value=0.931416) with  --  EMB2811; RFC2  --  has similar expression pattern (mutual information value=0.895657) with  --  AT1G20430
13 AT1G15420  --  has similar expression pattern (mutual information value=0.931416) with  --  EMB2811; RFC2  --  has similar expression pattern (mutual information value=0.875884) with  --  PBD1; PRCGB
14 AT1G15420  --  has similar expression pattern (mutual information value=0.931416) with  --  EMB2811; RFC2  --  has similar expression pattern (mutual information value=0.808268) with  --  RPL24; RPL24B; STV1
15 AT1G15420  --  has similar expression pattern (mutual information value=0.931416) with  --  EMB2811; RFC2  --  has similar expression pattern (mutual information value=0.808476) with  --  TOM5
16 AT1G15420  --  has similar expression pattern (mutual information value=0.931416) with  --  EMB2811; RFC2  --  has similar expression pattern (mutual information value=0.821078) with  --  ATVDAC3; VDAC3
17 AT1G15420  --  has similar expression pattern (mutual information value=0.873455) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.840559) with  --  EMB2217
18 AT1G15420  --  has similar expression pattern (mutual information value=0.873455) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030
19 AT1G15420  --  has similar expression pattern (mutual information value=0.873455) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.847962) with  --  AT1G71430
20 AT1G15420  --  has similar expression pattern (mutual information value=0.873455) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.85795) with  --  AT4G38150
21 AT1G15420  --  has similar expression pattern (mutual information value=0.873455) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.982528) with  --  BIR6
22 AT1G15420  --  has similar expression pattern (mutual information value=0.873455) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41
23 AT1G15420  --  has similar expression pattern (mutual information value=0.873455) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.917937) with  --  AT5G15750
24 AT1G15420  --  has similar expression pattern (mutual information value=0.816554) with  --  AT5G06360  --  has similar expression pattern (mutual information value=1.08231) with  --  EDA27; NOP10
25 AT1G15420  --  has similar expression pattern (mutual information value=0.816554) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.844631) with  --  AT1G07830
26 AT1G15420  --  has similar expression pattern (mutual information value=0.816554) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.837283) with  --  AT3G02560
27 AT1G15420  --  has similar expression pattern (mutual information value=0.816554) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.961865) with  --  AT3G58470
28 AT1G15420  --  has similar expression pattern (mutual information value=0.816554) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.902614) with  --  AT5G23900
29 AT1G15420  --  has similar expression pattern (mutual information value=0.816554) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.949243) with  --  AT5G39850
30 AT1G15420  --  has similar expression pattern (mutual information value=0.816554) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.840391) with  --  AT4G14000
31 AT1G15420  --  has similar expression pattern (mutual information value=0.816554) with  --  AT5G06360  --  has similar expression pattern (mutual information value=0.850901) with  --  DIM1A
32 AT1G15420  --  has similar expression pattern (mutual information value=0.850711) with  --  AT5G12220  --  has similar expression pattern (mutual information value=0.886138) with  --  AT3G13150
33 AT1G15420  --  has similar expression pattern (mutual information value=0.850711) with  --  AT5G12220  --  has similar expression pattern (mutual information value=0.860853) with  --  AT3G61100
34 AT1G15420  --  has similar expression pattern (mutual information value=0.84085) with  --  AT5G13830  --  has similar expression pattern (mutual information value=0.853204) with  --  AT3G53940
35 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=1.11736) with  --  AT2G35790
36 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=0.916875) with  --  AT1G60080
37 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=1.1665) with  --  NFD6
38 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=1.21656) with  --  TOM6
39 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=1.06416) with  --  RPS2
40 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=1.11966) with  --  AT3G11250
41 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=1.2445) with  --  AT4G12600
42 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=0.88733) with  --  AT3G57940
43 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=0.805859) with  --  AT5G11200
44 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=0.805859) with  --  AT5G11170
45 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=1.2613) with  --  PYRD
46 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=1.02526) with  --  AT5G42150
47 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=0.936712) with  --  ATMSI1; MEE70; MSI1
48 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=0.993684) with  --  AT5G60990
49 AT1G15420  --  has similar expression pattern (mutual information value=0.870969) with  --  ATPHB3; PHB3  --  has similar expression pattern (mutual information value=1.23271) with  --  ATEBP1; ATG2; EBP1
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