Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G40700
Type: Protein GRN ID: np20825 Name:
Annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein [TCDB:9.A.5.1] [EC:3.6.4.13]
Gene Locus: AT2G40700
Gene Expression (Affy ATH1 probeset): 266076_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2
3 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200
4 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.917581) with  --  AT1G45332
5 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.917581) with  --  AT2G45030
6 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.863351) with  --  AT2G19540
7 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.815048) with  --  EMB2217
8 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.953807) with  --  AT1G18850
9 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.864729) with  --  EMB1860; TIM50
10 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.830049) with  --  TRZ3
11 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=1.09509) with  --  AT3G07750
12 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.818412) with  --  APUM24; PUM24
13 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.807153) with  --  AT3G15590
14 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.809328) with  --  ATPRMT3; PRMT3
15 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.860117) with  --  RBL
16 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.880327) with  --  ATRH25; STRS2
17 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.812908) with  --  AT5G39840
18 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.882993) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
19 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.883151) with  --  AT5G16930
20 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has similar expression pattern (mutual information value=0.890004) with  --  AT1G30240
21 AT2G40700  --  has similar expression pattern (mutual information value=1.02567) with  --  NRPA2  --  has product (in catalytic reaction)  --  RNA
22 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200  --  interacts with  --  LSU1
23 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.814557) with  --  AT1G02870
24 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.958907) with  --  AT1G52930
25 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.855663) with  --  AT3G25545
26 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.975438) with  --  AT4G20020
27 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.814498) with  --  CSN6B
28 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.90951) with  --  AT4G38890
29 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.859197) with  --  AT3G49990
30 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.818052) with  --  AT5G18790
31 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.818052) with  --  AT3G06320
32 AT2G40700  --  has similar expression pattern (mutual information value=0.921048) with  --  AT4G28200  --  has similar expression pattern (mutual information value=0.962889) with  --  AT5G39850
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact