Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node RPS15AD
Type: Protein GRN ID: np24366 Name: RPS15AD
Annotation: RPS15AD | ribosomal protein S15A D
Gene Locus: AT3G46040
Gene Expression (Affy ATH1 probeset): 252566_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT4G18100
3 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT5G46430
4 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT4G18100  --  interacts with  --  TGA1
5 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT4G18100  --  has similar expression pattern (mutual information value=0.86232) with  --  AT2G18400
6 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT4G18100  --  has similar expression pattern (mutual information value=1.11276) with  --  AT3G16080
7 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT4G18100  --  has similar expression pattern (mutual information value=0.947571) with  --  EMB1080
8 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT4G18100  --  has similar expression pattern (mutual information value=1.05116) with  --  AT3G60245
9 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT4G18100  --  has similar expression pattern (mutual information value=0.965141) with  --  AT5G02450
10 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT4G18100  --  has similar expression pattern (mutual information value=0.982748) with  --  AT5G07090
11 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT4G18100  --  has similar expression pattern (mutual information value=0.893568) with  --  ATRBP45A; RBP45A
12 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT4G18100  --  has similar expression pattern (mutual information value=0.957228) with  --  AT4G14320
13 RPS15AD  --  has similar expression pattern (mutual information value=1.07387) with  --  AT5G46430  --  interacts with  --  ARR5
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab