Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G44835
Type: Protein GRN ID: np17476 Name:
Annotation: YbaK/aminoacyl-tRNA synthetase-associated domain
Gene Locus: AT1G44835
Gene Expression (Affy ATH1 probeset): 261328_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660
3 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.907711) with  --  MSI02; MSI2; NFC02; NFC2
4 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.883533) with  --  ATORC4; ORC4
5 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.821639) with  --  AT1G15810
6 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=1.01409) with  --  HSP60-3A
7 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.978014) with  --  AT4G10480
8 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.824875) with  --  AT4G11120
9 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.922566) with  --  AT4G34555
10 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.919497) with  --  AT3G56120
11 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.810853) with  --  ATUBA2; UBA 2
12 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.812999) with  --  AT5G07090
13 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.960302) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2
14 AT1G44835  --  has similar expression pattern (mutual information value=0.883109) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.89486) with  --  AT5G26710
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact