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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G34555
Type: Protein GRN ID: np33816 Name:
Annotation: Ribosomal protein S25 family protein
Gene Locus: AT4G34555
Gene Expression (Affy ATH1 probeset): 253202_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G34555  --  has similar expression pattern (mutual information value=0.922566) with  --  AT2G40660
3 AT4G34555  --  has similar expression pattern (mutual information value=0.90971) with  --  AT3G12860
4 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480
5 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1
6 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850
7 AT4G34555  --  has similar expression pattern (mutual information value=0.933039) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2
8 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1
9 AT4G34555  --  has similar expression pattern (mutual information value=1.04983) with  --  AT4G17390
10 AT4G34555  --  has similar expression pattern (mutual information value=0.922566) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.907711) with  --  MSI02; MSI2; NFC02; NFC2
11 AT4G34555  --  has similar expression pattern (mutual information value=0.922566) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.883533) with  --  ATORC4; ORC4
12 AT4G34555  --  has similar expression pattern (mutual information value=0.922566) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.883109) with  --  AT1G44835
13 AT4G34555  --  has similar expression pattern (mutual information value=0.922566) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.821639) with  --  AT1G15810
14 AT4G34555  --  has similar expression pattern (mutual information value=0.922566) with  --  AT2G40660  --  has similar expression pattern (mutual information value=1.01409) with  --  HSP60-3A
15 AT4G34555  --  has similar expression pattern (mutual information value=0.922566) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.824875) with  --  AT4G11120
16 AT4G34555  --  has similar expression pattern (mutual information value=0.922566) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.919497) with  --  AT3G56120
17 AT4G34555  --  has similar expression pattern (mutual information value=0.922566) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.810853) with  --  ATUBA2; UBA 2
18 AT4G34555  --  has similar expression pattern (mutual information value=0.922566) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.812999) with  --  AT5G07090
19 AT4G34555  --  has similar expression pattern (mutual information value=0.922566) with  --  AT2G40660  --  has similar expression pattern (mutual information value=0.89486) with  --  AT5G26710
20 AT4G34555  --  has similar expression pattern (mutual information value=0.90971) with  --  AT3G12860  --  has similar expression pattern (mutual information value=1.08671) with  --  RPS6; RPS6A
21 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  interacts with  --  AT5G50840
22 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  interacts with  --  AT2G42395
23 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.894615) with  --  ATPRMT1A; PRMT1A
24 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.926122) with  --  AT2G20710
25 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.945035) with  --  AT1G60770
26 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.986344) with  --  AT2G40430
27 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.12489) with  --  HTA8
28 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.987164) with  --  AT1G64880
29 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.975199) with  --  NFD5
30 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.16609) with  --  AT3G10090
31 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.00694) with  --  AT3G16780
32 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.17772) with  --  AT3G16080
33 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.957377) with  --  AT3G12390
34 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.997183) with  --  AT1G48830
35 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.878382) with  --  AtLa1; La1
36 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=1.31307) with  --  AT3G60245
37 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.980057) with  --  AT5G47210
38 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.809763) with  --  AT5G56500
39 AT4G34555  --  has similar expression pattern (mutual information value=0.905133) with  --  AT4G10480  --  has similar expression pattern (mutual information value=0.91551) with  --  AT5G13520
40 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.941236) with  --  AT2G44120
41 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.894526) with  --  AT1G53645
42 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.24154) with  --  PPR596
43 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.31214) with  --  AT3G03920
44 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.963526) with  --  AT3G23940
45 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.03066) with  --  TOM40
46 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.849395) with  --  AT4G24830
47 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.957614) with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
48 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.32732) with  --  ATPURM; EMB2818; PUR5
49 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.04887) with  --  ROC2
50 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.00661) with  --  AT5G02050
51 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=0.862432) with  --  AT5G23250
52 AT4G34555  --  has similar expression pattern (mutual information value=0.860435) with  --  ATHD2A; HD2A; HDA3; HDT1  --  has similar expression pattern (mutual information value=1.02599) with  --  AT4G15640
53 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.11074) with  --  AT2G27720
54 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.26449) with  --  RPL24A
55 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.1026) with  --  TOM6
56 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=0.988497) with  --  RPL10; RPL10A; SAC52
57 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.04157) with  --  AT1G29250
58 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.01465) with  --  AT1G74270
59 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.39154) with  --  AT3G05560
60 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=0.943465) with  --  RPL18
61 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.27508) with  --  AT3G23390
62 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.01812) with  --  AT4G33865
63 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.38376) with  --  EMB1080
64 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.00194) with  --  AT3G58700
65 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.08311) with  --  AT5G02450
66 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.03403) with  --  AT5G47930
67 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=0.97674) with  --  TIM8
68 AT4G34555  --  has similar expression pattern (mutual information value=0.939399) with  --  AT5G03850  --  has similar expression pattern (mutual information value=1.26101) with  --  AT5G09510
69 AT4G34555  --  has similar expression pattern (mutual information value=0.933039) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2  --  has similar expression pattern (mutual information value=0.872155) with  --  TIM13
70 AT4G34555  --  has similar expression pattern (mutual information value=0.933039) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2  --  has similar expression pattern (mutual information value=0.825223) with  --  AT1G15930
71 AT4G34555  --  has similar expression pattern (mutual information value=0.933039) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2  --  has similar expression pattern (mutual information value=1.00769) with  --  CPN10
72 AT4G34555  --  has similar expression pattern (mutual information value=0.933039) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2  --  has similar expression pattern (mutual information value=0.999582) with  --  ATKRS-1
73 AT4G34555  --  has similar expression pattern (mutual information value=0.933039) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2  --  has similar expression pattern (mutual information value=1.16083) with  --  AT3G09720
74 AT4G34555  --  has similar expression pattern (mutual information value=0.933039) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2  --  has similar expression pattern (mutual information value=0.941196) with  --  AT5G15520
75 AT4G34555  --  has similar expression pattern (mutual information value=0.933039) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2  --  has similar expression pattern (mutual information value=0.830061) with  --  MAP1A
76 AT4G34555  --  has similar expression pattern (mutual information value=0.933039) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2  --  interacts with  --  AtDNMT2; DNMT2
77 AT4G34555  --  has similar expression pattern (mutual information value=0.933039) with  --  ATHD2; ATHD2B; HD2; HD2B; HDA4; HDT02; HDT2  --  is modified by  --  ATCKA2; CKA2
78 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.947154) with  --  AT2G44860
79 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.807038) with  --  AT1G24310
80 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.13915) with  --  AT1G80750
81 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.888339) with  --  DECOY
82 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.916323) with  --  RPSAb
83 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.18063) with  --  AT3G11250
84 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.986114) with  --  MEE49
85 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.82366) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1
86 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.839779) with  --  AT4G35850
87 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.12437) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1
88 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.31532) with  --  PYRD
89 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.950364) with  --  DegP9
90 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.23271) with  --  ATPHB3; PHB3
91 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.1919) with  --  AT5G52650
92 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=1.04009) with  --  AT5G62440
93 AT4G34555  --  has similar expression pattern (mutual information value=0.932093) with  --  ATEBP1; ATG2; EBP1  --  has similar expression pattern (mutual information value=0.907906) with  --  AT2G39795
94 AT4G34555  --  has similar expression pattern (mutual information value=1.04983) with  --  AT4G17390  --  has similar expression pattern (mutual information value=0.966508) with  --  AML1; ATRPS5A; RPS5A
95 AT4G34555  --  has similar expression pattern (mutual information value=1.04983) with  --  AT4G17390  --  has similar expression pattern (mutual information value=1.12936) with  --  AT3G10610
96 AT4G34555  --  has similar expression pattern (mutual information value=1.04983) with  --  AT4G17390  --  has similar expression pattern (mutual information value=1.37396) with  --  AT5G02870
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