Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G18400
Type: Protein GRN ID: np18631 Name:
Annotation: ribosomal protein L6 family protein
Gene Locus: AT2G18400
Gene Expression (Affy ATH1 probeset): 265338_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390
3 AT2G18400  --  has similar expression pattern (mutual information value=0.970154) with  --  TIM10
4 AT2G18400  --  has similar expression pattern (mutual information value=0.971306) with  --  PFD1
5 AT2G18400  --  has similar expression pattern (mutual information value=1.15733) with  --  AT1G73940
6 AT2G18400  --  has similar expression pattern (mutual information value=0.957725) with  --  AT3G23390
7 AT2G18400  --  has similar expression pattern (mutual information value=0.91152) with  --  AT3G16080
8 AT2G18400  --  has similar expression pattern (mutual information value=0.915682) with  --  AT1G07070
9 AT2G18400  --  has similar expression pattern (mutual information value=0.86232) with  --  AT4G18100
10 AT2G18400  --  has similar expression pattern (mutual information value=0.86232) with  --  AT5G46430
11 AT2G18400  --  has similar expression pattern (mutual information value=0.931616) with  --  AT4G30330
12 AT2G18400  --  has similar expression pattern (mutual information value=1.0062) with  --  AT5G56710
13 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.02453) with  --  AT2G18740
14 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.05641) with  --  AT2G32060
15 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.06562) with  --  AT1G09590
16 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.06562) with  --  AT1G09690
17 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.04747) with  --  AT2G25210
18 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390  --  has similar expression pattern (mutual information value=0.853651) with  --  AT1G77750
19 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.08005) with  --  AT3G06700
20 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.0665) with  --  AT3G08520
21 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.0665) with  --  AT2G40205
22 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.0665) with  --  AT3G56020
23 AT2G18400  --  has similar expression pattern (mutual information value=0.96389) with  --  AT2G39390  --  has similar expression pattern (mutual information value=1.0665) with  --  AT3G11120
24 AT2G18400  --  has similar expression pattern (mutual information value=0.970154) with  --  TIM10  --  interacts with  --  NDL1
25 AT2G18400  --  has similar expression pattern (mutual information value=0.970154) with  --  TIM10  --  has similar expression pattern (mutual information value=0.823053) with  --  AT2G44860
26 AT2G18400  --  has similar expression pattern (mutual information value=0.970154) with  --  TIM10  --  has similar expression pattern (mutual information value=0.853715) with  --  EMB2786
27 AT2G18400  --  has similar expression pattern (mutual information value=0.970154) with  --  TIM10  --  has similar expression pattern (mutual information value=0.869843) with  --  AT3G18760
28 AT2G18400  --  has similar expression pattern (mutual information value=0.970154) with  --  TIM10  --  has similar expression pattern (mutual information value=0.93433) with  --  AT5G02450
29 AT2G18400  --  has similar expression pattern (mutual information value=0.970154) with  --  TIM10  --  has similar expression pattern (mutual information value=0.929693) with  --  TIM8
30 AT2G18400  --  has similar expression pattern (mutual information value=0.971306) with  --  PFD1  --  interacts with  --  ATNAP5; NAP5
31 AT2G18400  --  has similar expression pattern (mutual information value=0.971306) with  --  PFD1  --  has similar expression pattern (mutual information value=0.833802) with  --  SNRNP-G
32 AT2G18400  --  has similar expression pattern (mutual information value=0.971306) with  --  PFD1  --  has similar expression pattern (mutual information value=0.843871) with  --  NRPB6B; NRPE6B
33 AT2G18400  --  has similar expression pattern (mutual information value=0.971306) with  --  PFD1  --  has similar expression pattern (mutual information value=0.983001) with  --  AT1G64880
34 AT2G18400  --  has similar expression pattern (mutual information value=0.971306) with  --  PFD1  --  has similar expression pattern (mutual information value=0.83145) with  --  AT4G31985
35 AT2G18400  --  has similar expression pattern (mutual information value=0.971306) with  --  PFD1  --  has similar expression pattern (mutual information value=0.971319) with  --  AT3G59650
36 AT2G18400  --  has similar expression pattern (mutual information value=0.971306) with  --  PFD1  --  has similar expression pattern (mutual information value=0.836542) with  --  AT5G58990
37 AT2G18400  --  has similar expression pattern (mutual information value=0.971306) with  --  PFD1  --  has similar expression pattern (mutual information value=0.836542) with  --  AT5G52370
38 AT2G18400  --  has similar expression pattern (mutual information value=0.971306) with  --  PFD1  --  has similar expression pattern (mutual information value=1.07201) with  --  AT5G64670
39 AT2G18400  --  has similar expression pattern (mutual information value=1.15733) with  --  AT1G73940  --  has similar expression pattern (mutual information value=0.936185) with  --  AT2G19730
40 AT2G18400  --  has similar expression pattern (mutual information value=1.15733) with  --  AT1G73940  --  has similar expression pattern (mutual information value=1.12552) with  --  AT1G23100
41 AT2G18400  --  has similar expression pattern (mutual information value=1.15733) with  --  AT1G73940  --  has similar expression pattern (mutual information value=0.857657) with  --  AT3G02650
42 AT2G18400  --  has similar expression pattern (mutual information value=1.15733) with  --  AT1G73940  --  has similar expression pattern (mutual information value=0.984855) with  --  ATTCP-1; TCP-1
43 AT2G18400  --  has similar expression pattern (mutual information value=1.15733) with  --  AT1G73940  --  has similar expression pattern (mutual information value=1.06023) with  --  AT3G12390
44 AT2G18400  --  has similar expression pattern (mutual information value=1.15733) with  --  AT1G73940  --  has similar expression pattern (mutual information value=1.12407) with  --  AT4G05400
45 AT2G18400  --  has similar expression pattern (mutual information value=1.15733) with  --  AT1G73940  --  has similar expression pattern (mutual information value=1.108) with  --  AT4G23620
46 AT2G18400  --  has similar expression pattern (mutual information value=1.15733) with  --  AT1G73940  --  has similar expression pattern (mutual information value=0.948671) with  --  AT5G46160
47 AT2G18400  --  has similar expression pattern (mutual information value=1.15733) with  --  AT1G73940  --  has similar expression pattern (mutual information value=1.07107) with  --  AT5G62440
48 AT2G18400  --  has similar expression pattern (mutual information value=0.957725) with  --  AT3G23390  --  interacts with  --  IAA11
49 AT2G18400  --  has similar expression pattern (mutual information value=0.957725) with  --  AT3G23390  --  interacts with  --  ATCSP3; CSP3
50 AT2G18400  --  has similar expression pattern (mutual information value=0.957725) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.15898) with  --  AT3G05560
51 AT2G18400  --  has similar expression pattern (mutual information value=0.957725) with  --  AT3G23390  --  has similar expression pattern (mutual information value=0.923815) with  --  RPL18
52 AT2G18400  --  has similar expression pattern (mutual information value=0.957725) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G06680
53 AT2G18400  --  has similar expression pattern (mutual information value=0.957725) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.08171) with  --  AT3G44590
54 AT2G18400  --  has similar expression pattern (mutual information value=0.957725) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.27508) with  --  AT5G03850
55 AT2G18400  --  has similar expression pattern (mutual information value=0.957725) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.11526) with  --  AT5G27770
56 AT2G18400  --  has similar expression pattern (mutual information value=0.957725) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.14829) with  --  AT1G57860
57 AT2G18400  --  has similar expression pattern (mutual information value=0.957725) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.22586) with  --  AT5G09510
58 AT2G18400  --  has similar expression pattern (mutual information value=0.91152) with  --  AT3G16080  --  has similar expression pattern (mutual information value=1.13155) with  --  AT1G04480
59 AT2G18400  --  has similar expression pattern (mutual information value=0.91152) with  --  AT3G16080  --  has similar expression pattern (mutual information value=0.926419) with  --  AT1G23280
60 AT2G18400  --  has similar expression pattern (mutual information value=0.91152) with  --  AT3G16080  --  has similar expression pattern (mutual information value=0.96967) with  --  AT1G77550
61 AT2G18400  --  has similar expression pattern (mutual information value=0.91152) with  --  AT3G16080  --  has similar expression pattern (mutual information value=0.868867) with  --  AT1G16740
62 AT2G18400  --  has similar expression pattern (mutual information value=0.91152) with  --  AT3G16080  --  has similar expression pattern (mutual information value=1.17772) with  --  AT4G10480
63 AT2G18400  --  has similar expression pattern (mutual information value=0.91152) with  --  AT3G16080  --  has similar expression pattern (mutual information value=0.93846) with  --  AT3G57490
64 AT2G18400  --  has similar expression pattern (mutual information value=0.91152) with  --  AT3G16080  --  has similar expression pattern (mutual information value=1.14348) with  --  AT3G60245
65 AT2G18400  --  has similar expression pattern (mutual information value=0.91152) with  --  AT3G16080  --  has similar expression pattern (mutual information value=0.889494) with  --  ATRBP45A; RBP45A
66 AT2G18400  --  has similar expression pattern (mutual information value=0.915682) with  --  AT1G07070  --  has similar expression pattern (mutual information value=1.06638) with  --  AT2G37990
67 AT2G18400  --  has similar expression pattern (mutual information value=0.915682) with  --  AT1G07070  --  has similar expression pattern (mutual information value=1.23975) with  --  AT1G29250
68 AT2G18400  --  has similar expression pattern (mutual information value=0.915682) with  --  AT1G07070  --  has similar expression pattern (mutual information value=1.02793) with  --  AT3G58700
69 AT2G18400  --  has similar expression pattern (mutual information value=0.915682) with  --  AT1G07070  --  has similar expression pattern (mutual information value=1.24149) with  --  AT5G59850
70 AT2G18400  --  has similar expression pattern (mutual information value=0.915682) with  --  AT1G07070  --  has similar expression pattern (mutual information value=1.21485) with  --  AT5G60670
71 AT2G18400  --  has similar expression pattern (mutual information value=0.86232) with  --  AT4G18100  --  interacts with  --  TGA1
72 AT2G18400  --  has similar expression pattern (mutual information value=0.86232) with  --  AT4G18100  --  has similar expression pattern (mutual information value=1.07387) with  --  RPS15AD
73 AT2G18400  --  has similar expression pattern (mutual information value=0.86232) with  --  AT4G18100  --  has similar expression pattern (mutual information value=0.947571) with  --  EMB1080
74 AT2G18400  --  has similar expression pattern (mutual information value=0.86232) with  --  AT4G18100  --  has similar expression pattern (mutual information value=0.982748) with  --  AT5G07090
75 AT2G18400  --  has similar expression pattern (mutual information value=0.86232) with  --  AT5G46430  --  interacts with  --  ARR5
76 AT2G18400  --  has similar expression pattern (mutual information value=0.931616) with  --  AT4G30330  --  interacts with  --  RUXF
77 AT2G18400  --  has similar expression pattern (mutual information value=0.931616) with  --  AT4G30330  --  interacts with  --  AT1G24050
78 AT2G18400  --  has similar expression pattern (mutual information value=0.931616) with  --  AT4G30330  --  interacts with  --  AT2G32840
79 AT2G18400  --  has similar expression pattern (mutual information value=0.931616) with  --  AT4G30330  --  interacts with  --  AT3G59810
80 AT2G18400  --  has similar expression pattern (mutual information value=0.931616) with  --  AT4G30330  --  has similar expression pattern (mutual information value=0.867972) with  --  AT2G45860
81 AT2G18400  --  has similar expression pattern (mutual information value=0.931616) with  --  AT4G30330  --  has similar expression pattern (mutual information value=0.931636) with  --  APC13; BNS
82 AT2G18400  --  has similar expression pattern (mutual information value=1.0062) with  --  AT5G56710  --  has similar expression pattern (mutual information value=1.04768) with  --  AT4G29410
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact