Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node SDG13; SUVR1
Type: Protein GRN ID: np16003 Name: SDG13; SUVR1
Annotation: SUVR1, SDG13 | homolog of SU(var)3-9 1
Gene Locus: AT1G04050
Transcription factor /
transcriptional regulator:
chromatin remodeling family SET
Gene Expression (Affy ATH1 probeset): 265089_at    257404_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1
3 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  UBP16
4 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  UBP15
5 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  SDG31; SUVR4
6 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ATCHIP; CHIP
7 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ATELC; ELC
8 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ARR14
9 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ARR1
10 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  has similar expression pattern (mutual information value=0.875263) with  --  AT2G31610
11 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  has similar expression pattern (mutual information value=1.0117) with  --  AT1G34030
12 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  has similar expression pattern (mutual information value=0.9629) with  --  AT5G07090
13 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  has similar expression pattern (mutual information value=0.97183) with  --  AT4G16720
14 SDG13; SUVR1  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  has similar expression pattern (mutual information value=1.06175) with  --  AT4G14320
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab