Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node UBP16
Type: Protein GRN ID: np34795 Name: UBP16
Annotation: UBP16 | ubiquitin-specific protease 16 [EC:3.1.2.15]
Gene Locus: AT4G24560
Gene Expression (Affy ATH1 probeset): 254128_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 UBP16  --  has product (in catalytic reaction)  --  Thiol
3 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1
4 UBP16  --  interacts with  --  HIPP27
5 UBP16  --  interacts with  --  SHM4
6 UBP16  --  interacts with  --  SHM1; SHMT1; STM
7 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  BGLU39; TGG3
8 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  Thioglucoside
9 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  tgg1/myrosinase 1
10 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  tgg2/myrosinase 2
11 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  BGLU36
12 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  BGLU35; TGG5
13 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  BGLU34; TGG4
14 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP17
15 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP23
16 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP21
17 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP8
18 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP22
19 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  AtUBP12; UBP12
20 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP3; UBP3
21 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP27
22 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP18
23 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP24
24 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP20
25 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  AMSH3
26 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP10
27 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP9
28 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP26; SUP32; UBP26
29 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP7
30 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP14; PER1; TTN6; UBP14
31 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP25
32 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  AtUBP13; UBP13
33 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP5; PDE323; UBP5
34 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP1; UBP1
35 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  OTLD1
36 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP19
37 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP4; UBP4
38 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  AMSH1
39 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  UBP11
40 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  AMSH2
41 UBP16  --  has product (in catalytic reaction)  --  Thiol  --  is product (in catalytic reaction) of  --  ATUBP2; UBP2
42 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  SDG18; SUVR2
43 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  SDG13; SUVR1
44 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  UBP15
45 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  SDG31; SUVR4
46 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ATCHIP; CHIP
47 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ATELC; ELC
48 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ARR14
49 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  interacts with  --  ARR1
50 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  has similar expression pattern (mutual information value=0.875263) with  --  AT2G31610
51 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  has similar expression pattern (mutual information value=1.0117) with  --  AT1G34030
52 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  has similar expression pattern (mutual information value=0.9629) with  --  AT5G07090
53 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  has similar expression pattern (mutual information value=0.97183) with  --  AT4G16720
54 UBP16  --  interacts with  --  EMB2167; ERD16; HAP4; UBQ1  --  has similar expression pattern (mutual information value=1.06175) with  --  AT4G14320
55 UBP16  --  interacts with  --  HIPP27  --  interacts with  --  ATHB29; ZFHD1; ZHD11
56 UBP16  --  interacts with  --  HIPP27  --  interacts with  --  ATCFIM-25; CFIM-25
57 UBP16  --  interacts with  --  HIPP27  --  interacts with  --  AT1G14340
58 UBP16  --  interacts with  --  HIPP27  --  interacts with  --  ASIL1
59 UBP16  --  interacts with  --  SHM4  --  interacts with  --  AT4G37130
60 UBP16  --  interacts with  --  SHM4  --  has similar expression pattern (mutual information value=1.00251) with  --  MAT3
61 UBP16  --  interacts with  --  SHM4  --  has similar expression pattern (mutual information value=0.829519) with  --  NRS/ER; UER1
62 UBP16  --  interacts with  --  SHM4  --  has product (in catalytic reaction)  --  Tetrahydrofolate
63 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.26297) with  --  PSBW
64 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.32419) with  --  EDA3
65 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.5285) with  --  AT2G27680
66 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=0.802438) with  --  AT2G19650
67 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.19799) with  --  AOR
68 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.51869) with  --  ZKT
69 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.03511) with  --  AT1G65490
70 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.39536) with  --  TLP18.3
71 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.42627) with  --  CRB; CSP41B; HIP1.3
72 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.37727) with  --  LQY1
73 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.31687) with  --  OE23; OEE2; PSBP-1; PSII-P
74 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.06955) with  --  FTSH1
75 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.376) with  --  NDF1; NDH48
76 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.26378) with  --  ATCDSP32; CDSP32
77 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.20036) with  --  CLPP5; NCLPP1; NCLPP5
78 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=0.839916) with  --  mtLPD1
79 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.32527) with  --  AT1G76450
80 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.5342) with  --  ATCYP38; CYP38
81 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.45329) with  --  PGK1
82 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=0.949806) with  --  AtFAD7; FAD7; FADD
83 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=0.949806) with  --  AtFAD8; FAD8
84 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.70136) with  --  AT1G18060
85 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.22055) with  --  HCF173
86 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.25973) with  --  PSAD-1
87 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.36801) with  --  PETC; PGR1
88 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.38309) with  --  ATPC1
89 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.44905) with  --  PGR5-LIKE A
90 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.27928) with  --  FAD6; FADC; SFD4
91 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.22588) with  --  AtGLDP1; GLDP1
92 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.33878) with  --  AT4G35250
93 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.56193) with  --  FBA2
94 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.01949) with  --  ACA1; ATACA1; CAH1
95 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.0775) with  --  ATGR2; EMB2360; GR
96 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.47869) with  --  SBPASE
97 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.29611) with  --  AT3G61870
98 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.42563) with  --  AT5G08650
99 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.32348) with  --  HCF136
100 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.40616) with  --  FTSH5; VAR1
101 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.34045) with  --  CLB4; CSB3; GCPE; HDS; ISPG
102 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.26627) with  --  ATLDA; ATPU1; LDA; PU1
103 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.41119) with  --  FD-GOGAT; GLS1; GLU1; GLUS
104 UBP16  --  interacts with  --  SHM1; SHMT1; STM  --  has similar expression pattern (mutual information value=1.24383) with  --  RCA
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact