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Location:  Home > Details for node PYRB
Type: Protein GRN ID: np29735 Name: PYRB
Annotation: PYRB | PYRIMIDINE B [EC:2.1.3.2]
Gene Locus: AT3G20330
Gene Expression (Affy ATH1 probeset): 257680_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 PYRB  --  has product (in catalytic reaction)  --  N-Carbamoyl-L-aspartate
3 PYRB  --  is the target gene of  --  ath-miR5640
4 PYRB  --  has similar expression pattern (mutual information value=0.825007) with  --  AT2G35040
5 PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500
6 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108
7 PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12
8 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750
9 PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14
10 PYRB  --  has similar expression pattern (mutual information value=0.892713) with  --  OTC
11 PYRB  --  has similar expression pattern (mutual information value=1.16818) with  --  GYRA
12 PYRB  --  has similar expression pattern (mutual information value=1.00962) with  --  RPS10
13 PYRB  --  has similar expression pattern (mutual information value=0.898144) with  --  AT3G15460
14 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6
15 PYRB  --  has similar expression pattern (mutual information value=0.823075) with  --  AT1G16870
16 PYRB  --  has similar expression pattern (mutual information value=0.841877) with  --  AT3G58610
17 PYRB  --  has similar expression pattern (mutual information value=0.980447) with  --  PDE340
18 PYRB  --  has similar expression pattern (mutual information value=0.85383) with  --  AT5G10010
19 PYRB  --  has product (in catalytic reaction)  --  N-Carbamoyl-L-aspartate  --  is product (in catalytic reaction) of  --  DHOASE; PYR4
20 PYRB  --  has product (in catalytic reaction)  --  N-Carbamoyl-L-aspartate  --  is product (in catalytic reaction) of  --  (S)-Dihydroorotate
21 PYRB  --  is the target gene of  --  ath-miR5640  --  inhibit the expression of  --  AT4G28760
22 PYRB  --  is the target gene of  --  ath-miR5640  --  inhibit the expression of  --  AT4G11375
23 PYRB  --  is the target gene of  --  ath-miR5640  --  inhibit the expression of  --  AT3G62070
24 PYRB  --  is the target gene of  --  ath-miR5640  --  inhibit the expression of  --  ARP7; ARP7; ATARP7
25 PYRB  --  is the target gene of  --  ath-miR5640  --  inhibit the expression of  --  AT3G46186
26 PYRB  --  is the target gene of  --  ath-miR5640  --  inhibit the expression of  --  AT3G26614
27 PYRB  --  is the target gene of  --  ath-miR5640  --  inhibit the expression of  --  ATPPC3; PPC3
28 PYRB  --  is the target gene of  --  ath-miR5640  --  inhibit the expression of  --  WRKY4
29 PYRB  --  has similar expression pattern (mutual information value=0.825007) with  --  AT2G35040  --  has product (in catalytic reaction)  --  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
30 PYRB  --  has similar expression pattern (mutual information value=0.825007) with  --  AT2G35040  --  has product (in catalytic reaction)  --  Tetrahydrofolate
31 PYRB  --  has similar expression pattern (mutual information value=0.825007) with  --  AT2G35040  --  has similar expression pattern (mutual information value=0.837186) with  --  ATPURM; EMB2818; PUR5
32 PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500  --  has product (in catalytic reaction)  --  N-Acetyl-L-glutamate
33 PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500  --  has product (in catalytic reaction)  --  L-Ornithine
34 PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500  --  has similar expression pattern (mutual information value=0.859429) with  --  CPZ; TRZ2
35 PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500  --  has similar expression pattern (mutual information value=0.820234) with  --  AT1G56050
36 PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500  --  has similar expression pattern (mutual information value=0.924785) with  --  GYRB1
37 PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500  --  has similar expression pattern (mutual information value=0.924785) with  --  GYRB2
38 PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500  --  has similar expression pattern (mutual information value=0.847369) with  --  AT3G18420
39 PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500  --  has similar expression pattern (mutual information value=0.823043) with  --  AtMYB6; MYB6
40 PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500  --  has similar expression pattern (mutual information value=0.804607) with  --  ATIPT9
41 PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500  --  has similar expression pattern (mutual information value=0.802061) with  --  ATOEP80; EMB213; OEP80; TOC75-V
42 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  interacts with  --  RPL24; RPL24B; STV1
43 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.912674) with  --  EMB2001
44 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.08862) with  --  OTP81
45 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.806973) with  --  ATCAF1; CAF1
46 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.00052) with  --  AtHsp90.5; CR88; EMB1956; Hsp88.1; HSP90.5
47 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.991737) with  --  AT1G48570
48 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.04803) with  --  AT1G48460
49 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.963434) with  --  RFC3
50 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.969647) with  --  AT3G20240
51 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.929483) with  --  AtSHMT3; SHM3
52 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.802456) with  --  AT4G34290
53 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.971257) with  --  ATFTSZ1-1; CPFTSZ; FTSZ1-1
54 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  transport  --  meso-Tartaric acid
55 PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108  --  transport  --  Citrate
56 PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.962935) with  --  AT2G39670
57 PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.872731) with  --  AT2G44640
58 PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=1.01333) with  --  ATSRS; OVA7; SRS
59 PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=1.04547) with  --  CH-CPN60A; CPN60A; SLP
60 PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=1.03425) with  --  ATTIC110; TIC110
61 PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.857909) with  --  cpHsc70-1
62 PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.960332) with  --  PYRR; UPP
63 PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.831237) with  --  ARC6
64 PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.898494) with  --  OVA6; PRORS1
65 PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.890406) with  --  EMB3144
66 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=0.991601) with  --  AT2G44860
67 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.03263) with  --  AT2G37990
68 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.07375) with  --  RPL24A
69 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.06031) with  --  AT1G79150
70 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.04643) with  --  AT2G21580
71 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=0.99763) with  --  AT2G28600
72 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.06789) with  --  EMB2762
73 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.10677) with  --  NOP56
74 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.11796) with  --  AT3G07110
75 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.00743) with  --  RPSAb
76 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=0.880674) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1
77 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.27966) with  --  AT4G29410
78 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.03674) with  --  EMB1080
79 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=0.994723) with  --  AT3G49080
80 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=0.95613) with  --  AT3G57490
81 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.0499) with  --  AT5G14050
82 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=0.953756) with  --  EIF(ISO)4E; EIF4E2; eIFiso4E; LSP; LSP1
83 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=0.957897) with  --  PPAN
84 PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.13915) with  --  ATEBP1; ATG2; EBP1
85 PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14  --  interacts with  --  AT4G33905
86 PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14  --  interacts with  --  AT4G25160
87 PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14  --  interacts with  --  AtRABA1e; RABA1e
88 PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14  --  interacts with  --  AT4G18340
89 PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14  --  interacts with  --  AT1G73920
90 PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14  --  interacts with  --  ANAC002; ATAF1
91 PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14  --  interacts with  --  ANAC055; ATNAC3; NAC055; NAC3
92 PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14  --  has similar expression pattern (mutual information value=0.93079) with  --  AtCOR47; COR47; RD17
93 PYRB  --  has similar expression pattern (mutual information value=0.892713) with  --  OTC  --  interacts with  --  TGA1
94 PYRB  --  has similar expression pattern (mutual information value=0.892713) with  --  OTC  --  has product (in catalytic reaction)  --  L-Citrulline
95 PYRB  --  has similar expression pattern (mutual information value=1.16818) with  --  GYRA  --  has similar expression pattern (mutual information value=0.808948) with  --  AT1G63660
96 PYRB  --  has similar expression pattern (mutual information value=1.16818) with  --  GYRA  --  has similar expression pattern (mutual information value=0.97036) with  --  AT3G14390
97 PYRB  --  has similar expression pattern (mutual information value=1.16818) with  --  GYRA  --  has similar expression pattern (mutual information value=0.97036) with  --  AT5G11880
98 PYRB  --  has similar expression pattern (mutual information value=1.16818) with  --  GYRA  --  has similar expression pattern (mutual information value=0.891117) with  --  AT5G10920
99 PYRB  --  has similar expression pattern (mutual information value=1.16818) with  --  GYRA  --  has similar expression pattern (mutual information value=0.897596) with  --  PYRD
100 PYRB  --  has similar expression pattern (mutual information value=1.16818) with  --  GYRA  --  has similar expression pattern (mutual information value=0.862361) with  --  AT-RAB2; ATRAB-B1B; ATRAB2A; ATRABB1C; RAB-B1B; RAB2A; RABB1C
101 PYRB  --  has similar expression pattern (mutual information value=1.00962) with  --  RPS10  --  has similar expression pattern (mutual information value=1.14326) with  --  AT1G28395
102 PYRB  --  has similar expression pattern (mutual information value=1.00962) with  --  RPS10  --  has similar expression pattern (mutual information value=1.103) with  --  RPS2
103 PYRB  --  has similar expression pattern (mutual information value=1.00962) with  --  RPS10  --  has similar expression pattern (mutual information value=0.904448) with  --  SAPX
104 PYRB  --  has similar expression pattern (mutual information value=0.898144) with  --  AT3G15460  --  has similar expression pattern (mutual information value=1.01958) with  --  NFD6
105 PYRB  --  has similar expression pattern (mutual information value=0.898144) with  --  AT3G15460  --  has similar expression pattern (mutual information value=0.942578) with  --  AR192
106 PYRB  --  has similar expression pattern (mutual information value=0.898144) with  --  AT3G15460  --  has similar expression pattern (mutual information value=0.857854) with  --  AT4G38100
107 PYRB  --  has similar expression pattern (mutual information value=0.898144) with  --  AT3G15460  --  has similar expression pattern (mutual information value=0.867468) with  --  DegP10
108 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6  --  interacts with  --  CARB; VEN3
109 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.964431) with  --  AT1G77940
110 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.972231) with  --  AT1G55890
111 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.859264) with  --  emb2742
112 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=1.06694) with  --  RACK1B; RACK1B_AT
113 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.822059) with  --  ATIMPALPHA3; IMPA-3; MOS6
114 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.839752) with  --  ADSS
115 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=1.01198) with  --  AT5G58420
116 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.964462) with  --  AT5G61170
117 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=1.04933) with  --  AT5G16130
118 PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6  --  has product (in catalytic reaction)  --  Carbamoyl phosphate
119 PYRB  --  has similar expression pattern (mutual information value=0.823075) with  --  AT1G16870  --  has similar expression pattern (mutual information value=0.871573) with  --  ATPRMT5; PRMT5; SKB1
120 PYRB  --  has similar expression pattern (mutual information value=0.823075) with  --  AT1G16870  --  has similar expression pattern (mutual information value=0.815163) with  --  ATBT1; EMB104; EMB42; SHS1
121 PYRB  --  has similar expression pattern (mutual information value=0.823075) with  --  AT1G16870  --  has similar expression pattern (mutual information value=1.04192) with  --  AT5G15810
122 PYRB  --  has similar expression pattern (mutual information value=0.841877) with  --  AT3G58610  --  has similar expression pattern (mutual information value=0.827691) with  --  ILA
123 PYRB  --  has similar expression pattern (mutual information value=0.841877) with  --  AT3G58610  --  has product (in catalytic reaction)  --  (S)-2-Acetolactate
124 PYRB  --  has similar expression pattern (mutual information value=0.980447) with  --  PDE340  --  has similar expression pattern (mutual information value=0.853511) with  --  PDE319; SCA3
125 PYRB  --  has similar expression pattern (mutual information value=0.980447) with  --  PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522
126 PYRB  --  has similar expression pattern (mutual information value=0.980447) with  --  PDE340  --  has similar expression pattern (mutual information value=0.984868) with  --  AT3G21300
127 PYRB  --  has similar expression pattern (mutual information value=0.980447) with  --  PDE340  --  has similar expression pattern (mutual information value=0.910795) with  --  AT1G72040
128 PYRB  --  has similar expression pattern (mutual information value=0.980447) with  --  PDE340  --  has similar expression pattern (mutual information value=0.97784) with  --  AT4G27340
129 PYRB  --  has similar expression pattern (mutual information value=0.980447) with  --  PDE340  --  has similar expression pattern (mutual information value=1.09222) with  --  AT4G31210
130 PYRB  --  has similar expression pattern (mutual information value=0.980447) with  --  PDE340  --  has similar expression pattern (mutual information value=0.84096) with  --  AT5G23070
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

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