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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT2G39670
Type: Protein GRN ID: np23118 Name:
Annotation: Radical SAM superfamily protein
Gene Locus: AT2G39670
Gene Expression (Affy ATH1 probeset): 267562_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT2G39670  --  has similar expression pattern (mutual information value=0.887993) with  --  ATCAF1; CAF1
3 AT2G39670  --  has similar expression pattern (mutual information value=1.02645) with  --  ATSRS; OVA7; SRS
4 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12
5 AT2G39670  --  has similar expression pattern (mutual information value=0.960114) with  --  PDE343; PTAC2
6 AT2G39670  --  has similar expression pattern (mutual information value=1.0523) with  --  RH39
7 AT2G39670  --  has similar expression pattern (mutual information value=0.887993) with  --  ATCAF1; CAF1  --  has similar expression pattern (mutual information value=0.806973) with  --  EMB3108
8 AT2G39670  --  has similar expression pattern (mutual information value=0.887993) with  --  ATCAF1; CAF1  --  has similar expression pattern (mutual information value=0.806045) with  --  TRX P; TRX z
9 AT2G39670  --  has similar expression pattern (mutual information value=0.887993) with  --  ATCAF1; CAF1  --  has similar expression pattern (mutual information value=0.818416) with  --  FLN1
10 AT2G39670  --  has similar expression pattern (mutual information value=0.887993) with  --  ATCAF1; CAF1  --  has similar expression pattern (mutual information value=0.834554) with  --  ARC6
11 AT2G39670  --  has similar expression pattern (mutual information value=0.887993) with  --  ATCAF1; CAF1  --  has similar expression pattern (mutual information value=0.911167) with  --  emb2746
12 AT2G39670  --  has similar expression pattern (mutual information value=1.02645) with  --  ATSRS; OVA7; SRS  --  has similar expression pattern (mutual information value=0.894017) with  --  OVA4
13 AT2G39670  --  has similar expression pattern (mutual information value=1.02645) with  --  ATSRS; OVA7; SRS  --  has similar expression pattern (mutual information value=0.918152) with  --  ATTIC110; TIC110
14 AT2G39670  --  has similar expression pattern (mutual information value=1.02645) with  --  ATSRS; OVA7; SRS  --  has similar expression pattern (mutual information value=0.808867) with  --  PDE326; PNP; RIF10
15 AT2G39670  --  has similar expression pattern (mutual information value=1.02645) with  --  ATSRS; OVA7; SRS  --  has similar expression pattern (mutual information value=0.808378) with  --  emb2458
16 AT2G39670  --  has similar expression pattern (mutual information value=1.02645) with  --  ATSRS; OVA7; SRS  --  has similar expression pattern (mutual information value=0.965478) with  --  OVA6; PRORS1
17 AT2G39670  --  has similar expression pattern (mutual information value=1.02645) with  --  ATSRS; OVA7; SRS  --  has similar expression pattern (mutual information value=0.976985) with  --  EMB3144
18 AT2G39670  --  has similar expression pattern (mutual information value=1.02645) with  --  ATSRS; OVA7; SRS  --  has product (in catalytic reaction)  --  L-Seryl-tRNA(Ser)
19 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.872731) with  --  AT2G44640
20 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=1.00241) with  --  AT2G37500
21 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=1.04547) with  --  CH-CPN60A; CPN60A; SLP
22 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.900833) with  --  CPZ; TRZ2
23 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=1.00302) with  --  AtHsp90.5; CR88; EMB1956; Hsp88.1; HSP90.5
24 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.875473) with  --  AT1G56050
25 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.846974) with  --  GYRB1
26 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.846974) with  --  GYRB2
27 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.925655) with  --  GYRA
28 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.850356) with  --  RFC3
29 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.87219) with  --  PYRB
30 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.857909) with  --  cpHsc70-1
31 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.960332) with  --  PYRR; UPP
32 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.904973) with  --  PDE340
33 AT2G39670  --  has similar expression pattern (mutual information value=0.962935) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.815963) with  --  ATOEP80; EMB213; OEP80; TOC75-V
34 AT2G39670  --  has similar expression pattern (mutual information value=0.960114) with  --  PDE343; PTAC2  --  has similar expression pattern (mutual information value=0.816166) with  --  PDE328; SVR1
35 AT2G39670  --  has similar expression pattern (mutual information value=0.960114) with  --  PDE343; PTAC2  --  has similar expression pattern (mutual information value=0.871693) with  --  AT2G17033
36 AT2G39670  --  has similar expression pattern (mutual information value=0.960114) with  --  PDE343; PTAC2  --  has similar expression pattern (mutual information value=0.923982) with  --  PTAC14
37 AT2G39670  --  has similar expression pattern (mutual information value=0.960114) with  --  PDE343; PTAC2  --  has similar expression pattern (mutual information value=0.857021) with  --  MRL1; PDE346
38 AT2G39670  --  has similar expression pattern (mutual information value=0.960114) with  --  PDE343; PTAC2  --  has similar expression pattern (mutual information value=0.842349) with  --  pde191
39 AT2G39670  --  has similar expression pattern (mutual information value=0.960114) with  --  PDE343; PTAC2  --  has similar expression pattern (mutual information value=0.821601) with  --  CP29
40 AT2G39670  --  has similar expression pattern (mutual information value=0.960114) with  --  PDE343; PTAC2  --  has similar expression pattern (mutual information value=0.865023) with  --  AT5G14460
41 AT2G39670  --  has similar expression pattern (mutual information value=0.960114) with  --  PDE343; PTAC2  --  has similar expression pattern (mutual information value=0.869137) with  --  AT5G35210
42 AT2G39670  --  has similar expression pattern (mutual information value=0.960114) with  --  PDE343; PTAC2  --  has similar expression pattern (mutual information value=0.869137) with  --  EGY1
43 AT2G39670  --  has similar expression pattern (mutual information value=0.960114) with  --  PDE343; PTAC2  --  has similar expression pattern (mutual information value=0.884732) with  --  AT4G36390
44 AT2G39670  --  has similar expression pattern (mutual information value=1.0523) with  --  RH39  --  has similar expression pattern (mutual information value=0.812478) with  --  MAR1; TOC75-III
45 AT2G39670  --  has similar expression pattern (mutual information value=1.0523) with  --  RH39  --  has similar expression pattern (mutual information value=0.949569) with  --  ATTIC40; PDE120; TIC40
46 AT2G39670  --  has similar expression pattern (mutual information value=1.0523) with  --  RH39  --  transport  --  Phospholipid
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