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Location:  Home > Details for node AT1G48460
Type: Protein GRN ID: np15990 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT1G48460
Gene Expression (Affy ATH1 probeset): 261296_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G48460  --  has similar expression pattern (mutual information value=0.930163) with  --  PDE319; SCA3
3 AT1G48460  --  has similar expression pattern (mutual information value=0.856976) with  --  AT1G09900
4 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108
5 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522
6 AT1G48460  --  has similar expression pattern (mutual information value=0.823813) with  --  AT1G71460
7 AT1G48460  --  has similar expression pattern (mutual information value=0.918644) with  --  AT3G21300
8 AT1G48460  --  has similar expression pattern (mutual information value=0.911333) with  --  AT3G20240
9 AT1G48460  --  has similar expression pattern (mutual information value=0.860566) with  --  OSB2; PTAC9
10 AT1G48460  --  has similar expression pattern (mutual information value=0.925988) with  --  AT4G27340
11 AT1G48460  --  has similar expression pattern (mutual information value=0.924584) with  --  AtSHMT3; SHM3
12 AT1G48460  --  has similar expression pattern (mutual information value=0.943497) with  --  FLN1
13 AT1G48460  --  has similar expression pattern (mutual information value=0.815475) with  --  BPG2
14 AT1G48460  --  has similar expression pattern (mutual information value=1.08498) with  --  PDE340
15 AT1G48460  --  has similar expression pattern (mutual information value=0.851882) with  --  AT5G23070
16 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400
17 AT1G48460  --  has similar expression pattern (mutual information value=0.930163) with  --  PDE319; SCA3  --  has product (in catalytic reaction)  --  RNA
18 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  interacts with  --  RPL24; RPL24B; STV1
19 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.912674) with  --  EMB2001
20 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.08862) with  --  OTP81
21 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.871385) with  --  AT2G37500
22 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.806973) with  --  ATCAF1; CAF1
23 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.05337) with  --  CPZ; TRZ2
24 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.00052) with  --  AtHsp90.5; CR88; EMB1956; Hsp88.1; HSP90.5
25 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.991737) with  --  AT1G48570
26 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.879081) with  --  GYRB1
27 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.879081) with  --  GYRB2
28 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.912315) with  --  GYRA
29 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.935625) with  --  AT3G15460
30 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.963434) with  --  RFC3
31 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.904589) with  --  PYRB
32 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.802456) with  --  AT4G34290
33 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.971257) with  --  ATFTSZ1-1; CPFTSZ; FTSZ1-1
34 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.917271) with  --  ATIPT9
35 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  transport  --  meso-Tartaric acid
36 AT1G48460  --  has similar expression pattern (mutual information value=1.04803) with  --  EMB3108  --  transport  --  Citrate
37 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  interacts with  --  CRB; CSP41B; HIP1.3
38 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.07576) with  --  MRL7-L
39 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.979059) with  --  ATRAP; RAP
40 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.06573) with  --  AT1G56050
41 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.1025) with  --  AT1G11430
42 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.92106) with  --  AT3G10350
43 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.15808) with  --  TRX P; TRX z
44 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.14962) with  --  AT3G18420
45 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.04123) with  --  AT4G26370
46 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.27075) with  --  EMB1923
47 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.897886) with  --  AT4G38020
48 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.970528) with  --  PDE312; PTAC10
49 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.913452) with  --  AT3G59980
50 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.997024) with  --  FSD3
51 AT1G48460  --  has similar expression pattern (mutual information value=0.908664) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.05034) with  --  SVR7
52 AT1G48460  --  has similar expression pattern (mutual information value=0.823813) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.860066) with  --  AT1G09740
53 AT1G48460  --  has similar expression pattern (mutual information value=0.823813) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.805126) with  --  AT1G28530
54 AT1G48460  --  has similar expression pattern (mutual information value=0.823813) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.955811) with  --  AT5G39980
55 AT1G48460  --  has similar expression pattern (mutual information value=0.918644) with  --  AT3G21300  --  has similar expression pattern (mutual information value=0.896195) with  --  AT4G31210
56 AT1G48460  --  has similar expression pattern (mutual information value=0.911333) with  --  AT3G20240  --  has similar expression pattern (mutual information value=0.939725) with  --  AT2G45710
57 AT1G48460  --  has similar expression pattern (mutual information value=0.911333) with  --  AT3G20240  --  has similar expression pattern (mutual information value=0.82514) with  --  AT1G71840
58 AT1G48460  --  has similar expression pattern (mutual information value=0.911333) with  --  AT3G20240  --  has similar expression pattern (mutual information value=0.995613) with  --  AT1G28395
59 AT1G48460  --  has similar expression pattern (mutual information value=0.911333) with  --  AT3G20240  --  has similar expression pattern (mutual information value=1.00937) with  --  BIR6
60 AT1G48460  --  has similar expression pattern (mutual information value=0.911333) with  --  AT3G20240  --  has similar expression pattern (mutual information value=0.837797) with  --  AT3G59840
61 AT1G48460  --  has similar expression pattern (mutual information value=0.911333) with  --  AT3G20240  --  has similar expression pattern (mutual information value=1.19086) with  --  AT5G05990
62 AT1G48460  --  has similar expression pattern (mutual information value=0.911333) with  --  AT3G20240  --  has similar expression pattern (mutual information value=0.951577) with  --  AT5G47455
63 AT1G48460  --  has similar expression pattern (mutual information value=0.911333) with  --  AT3G20240  --  has similar expression pattern (mutual information value=0.952409) with  --  AT5G54580
64 AT1G48460  --  has similar expression pattern (mutual information value=0.925988) with  --  AT4G27340  --  has similar expression pattern (mutual information value=0.818874) with  --  ACT8; FIZ1
65 AT1G48460  --  has similar expression pattern (mutual information value=0.925988) with  --  AT4G27340  --  is the target gene of  --  ath-miR835-3p
66 AT1G48460  --  has similar expression pattern (mutual information value=0.924584) with  --  AtSHMT3; SHM3  --  interacts with  --  AT4G08520
67 AT1G48460  --  has similar expression pattern (mutual information value=0.924584) with  --  AtSHMT3; SHM3  --  interacts with  --  ATGRX4; GRX4
68 AT1G48460  --  has similar expression pattern (mutual information value=0.924584) with  --  AtSHMT3; SHM3  --  has similar expression pattern (mutual information value=0.871807) with  --  FLN2
69 AT1G48460  --  has similar expression pattern (mutual information value=0.924584) with  --  AtSHMT3; SHM3  --  has similar expression pattern (mutual information value=1.00726) with  --  emb2742
70 AT1G48460  --  has similar expression pattern (mutual information value=0.924584) with  --  AtSHMT3; SHM3  --  has similar expression pattern (mutual information value=0.939766) with  --  AT3G57940
71 AT1G48460  --  has similar expression pattern (mutual information value=0.924584) with  --  AtSHMT3; SHM3  --  has similar expression pattern (mutual information value=0.849713) with  --  AT5G10920
72 AT1G48460  --  has similar expression pattern (mutual information value=0.924584) with  --  AtSHMT3; SHM3  --  has similar expression pattern (mutual information value=0.858151) with  --  ATOEP80; EMB213; OEP80; TOC75-V
73 AT1G48460  --  has similar expression pattern (mutual information value=0.924584) with  --  AtSHMT3; SHM3  --  has product (in catalytic reaction)  --  Tetrahydrofolate
74 AT1G48460  --  has similar expression pattern (mutual information value=0.943497) with  --  FLN1  --  has similar expression pattern (mutual information value=0.980285) with  --  MAP1B; MAP1C
75 AT1G48460  --  has similar expression pattern (mutual information value=0.943497) with  --  FLN1  --  has similar expression pattern (mutual information value=0.981601) with  --  AT3G02060
76 AT1G48460  --  has similar expression pattern (mutual information value=0.943497) with  --  FLN1  --  has similar expression pattern (mutual information value=1.01148) with  --  EMB2083
77 AT1G48460  --  has similar expression pattern (mutual information value=0.943497) with  --  FLN1  --  has similar expression pattern (mutual information value=0.967451) with  --  AT3G28460
78 AT1G48460  --  has similar expression pattern (mutual information value=0.943497) with  --  FLN1  --  has similar expression pattern (mutual information value=1.27776) with  --  AT3G18680
79 AT1G48460  --  has similar expression pattern (mutual information value=0.943497) with  --  FLN1  --  has similar expression pattern (mutual information value=0.905267) with  --  ATKRS-2; OVA5
80 AT1G48460  --  has similar expression pattern (mutual information value=0.943497) with  --  FLN1  --  has similar expression pattern (mutual information value=0.963129) with  --  ATNOA1; ATNOS1; NOA1; NOS1; RIF1
81 AT1G48460  --  has similar expression pattern (mutual information value=0.943497) with  --  FLN1  --  has similar expression pattern (mutual information value=1.06753) with  --  EMB139; EMB506
82 AT1G48460  --  has similar expression pattern (mutual information value=0.943497) with  --  FLN1  --  has similar expression pattern (mutual information value=1.32498) with  --  AT5G46580
83 AT1G48460  --  has similar expression pattern (mutual information value=0.943497) with  --  FLN1  --  has similar expression pattern (mutual information value=0.81235) with  --  AT3G51870
84 AT1G48460  --  has similar expression pattern (mutual information value=0.815475) with  --  BPG2  --  has similar expression pattern (mutual information value=1.00608) with  --  EMB2654
85 AT1G48460  --  has similar expression pattern (mutual information value=0.815475) with  --  BPG2  --  has similar expression pattern (mutual information value=0.874061) with  --  ATOBGC; ATOBGL; CPSAR1; EMB269; EMB3138
86 AT1G48460  --  has similar expression pattern (mutual information value=0.815475) with  --  BPG2  --  has similar expression pattern (mutual information value=0.867086) with  --  AT5G38290
87 AT1G48460  --  has similar expression pattern (mutual information value=0.815475) with  --  BPG2  --  has similar expression pattern (mutual information value=0.943113) with  --  scpl42
88 AT1G48460  --  has similar expression pattern (mutual information value=0.815475) with  --  BPG2  --  has similar expression pattern (mutual information value=0.848132) with  --  CRR21
89 AT1G48460  --  has similar expression pattern (mutual information value=0.815475) with  --  BPG2  --  is regulated by  --  BES1
90 AT1G48460  --  has similar expression pattern (mutual information value=1.08498) with  --  PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12
91 AT1G48460  --  has similar expression pattern (mutual information value=1.08498) with  --  PDE340  --  has similar expression pattern (mutual information value=0.910795) with  --  AT1G72040
92 AT1G48460  --  has similar expression pattern (mutual information value=0.851882) with  --  AT5G23070  --  has product (in catalytic reaction)  --  dTMP
93 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.984159) with  --  KAT1
94 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.807148) with  --  AT1G18910
95 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.8001) with  --  AT3G08000
96 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=1.15675) with  --  AT3G29230
97 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.80417) with  --  AT3G12210
98 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=1.14861) with  --  ATNUDT14; ATNUDX14; NUDX14
99 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.801916) with  --  AT3G48620
100 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.801916) with  --  AT3G44160
101 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.89142) with  --  AT5G10910
102 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.803788) with  --  AT5G17910
103 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.818396) with  --  PR5K
104 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.945381) with  --  AT5G39940
105 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G41960
106 AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.80118) with  --  AT4G14100
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