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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G16870
Type: Protein GRN ID: np15300 Name:
Annotation: mitochondrial 28S ribosomal protein S29-related
Gene Locus: AT1G16870
Gene Expression (Affy ATH1 probeset): 256106_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890
3 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6
4 AT1G16870  --  has similar expression pattern (mutual information value=0.849909) with  --  emb2742
5 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB
6 AT1G16870  --  has similar expression pattern (mutual information value=0.871573) with  --  ATPRMT5; PRMT5; SKB1
7 AT1G16870  --  has similar expression pattern (mutual information value=0.815163) with  --  ATBT1; EMB104; EMB42; SHS1
8 AT1G16870  --  has similar expression pattern (mutual information value=0.956092) with  --  AT3G58610
9 AT1G16870  --  has similar expression pattern (mutual information value=1.04192) with  --  AT5G15810
10 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  interacts with  --  AT3G27960
11 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  interacts with  --  AT4G39050
12 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  interacts with  --  AtNBR1; NBR1
13 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  interacts with  --  ICK2; KRP2
14 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  has similar expression pattern (mutual information value=1.21037) with  --  AT2G42910
15 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  has similar expression pattern (mutual information value=1.07488) with  --  AP40; P40; RP40; RPSAA
16 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  has similar expression pattern (mutual information value=1.26716) with  --  AT3G07110
17 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  has similar expression pattern (mutual information value=1.03517) with  --  AT3G13160
18 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  has similar expression pattern (mutual information value=0.874318) with  --  CSN6B
19 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  has similar expression pattern (mutual information value=1.1907) with  --  RPL24; RPL24B; STV1
20 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  has similar expression pattern (mutual information value=0.946661) with  --  AT5G02740
21 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  has similar expression pattern (mutual information value=1.05943) with  --  AT1G58983
22 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  has similar expression pattern (mutual information value=1.05943) with  --  AT1G59359
23 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  has similar expression pattern (mutual information value=1.05943) with  --  AT1G58684
24 AT1G16870  --  has similar expression pattern (mutual information value=0.99654) with  --  AT1G55890  --  has similar expression pattern (mutual information value=1.05943) with  --  XW6
25 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  interacts with  --  CARB; VEN3
26 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=1.04276) with  --  EMB2762
27 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.964431) with  --  AT1G77940
28 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.91984) with  --  OTC
29 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=1.01507) with  --  RPS10
30 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=1.06694) with  --  RACK1B; RACK1B_AT
31 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.822059) with  --  ATIMPALPHA3; IMPA-3; MOS6
32 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.957329) with  --  emb1027
33 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.839752) with  --  ADSS
34 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.853539) with  --  AT5G10010
35 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=1.01198) with  --  AT5G58420
36 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.964462) with  --  AT5G61170
37 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=1.04933) with  --  AT5G16130
38 AT1G16870  --  has similar expression pattern (mutual information value=0.901042) with  --  CARA; VEN6  --  has product (in catalytic reaction)  --  Carbamoyl phosphate
39 AT1G16870  --  has similar expression pattern (mutual information value=0.849909) with  --  emb2742  --  has similar expression pattern (mutual information value=1.00726) with  --  AtSHMT3; SHM3
40 AT1G16870  --  has similar expression pattern (mutual information value=0.849909) with  --  emb2742  --  has product (in catalytic reaction)  --  CTP
41 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB  --  has similar expression pattern (mutual information value=0.825007) with  --  AT2G35040
42 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500
43 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108
44 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12
45 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750
46 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14
47 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB  --  has similar expression pattern (mutual information value=1.16818) with  --  GYRA
48 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB  --  has similar expression pattern (mutual information value=0.898144) with  --  AT3G15460
49 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB  --  has similar expression pattern (mutual information value=0.980447) with  --  PDE340
50 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB  --  has product (in catalytic reaction)  --  N-Carbamoyl-L-aspartate
51 AT1G16870  --  has similar expression pattern (mutual information value=0.823075) with  --  PYRB  --  is the target gene of  --  ath-miR5640
52 AT1G16870  --  has similar expression pattern (mutual information value=0.871573) with  --  ATPRMT5; PRMT5; SKB1  --  has similar expression pattern (mutual information value=1.0764) with  --  AT2G05140
53 AT1G16870  --  has similar expression pattern (mutual information value=0.871573) with  --  ATPRMT5; PRMT5; SKB1  --  has similar expression pattern (mutual information value=1.0764) with  --  AT2G37690
54 AT1G16870  --  has similar expression pattern (mutual information value=0.871573) with  --  ATPRMT5; PRMT5; SKB1  --  has similar expression pattern (mutual information value=0.863467) with  --  AT2G36160
55 AT1G16870  --  has similar expression pattern (mutual information value=0.871573) with  --  ATPRMT5; PRMT5; SKB1  --  has similar expression pattern (mutual information value=0.910088) with  --  DECOY
56 AT1G16870  --  has similar expression pattern (mutual information value=0.871573) with  --  ATPRMT5; PRMT5; SKB1  --  has similar expression pattern (mutual information value=1.06259) with  --  PPR596
57 AT1G16870  --  has similar expression pattern (mutual information value=0.871573) with  --  ATPRMT5; PRMT5; SKB1  --  has similar expression pattern (mutual information value=1.05745) with  --  TOM40
58 AT1G16870  --  has similar expression pattern (mutual information value=0.871573) with  --  ATPRMT5; PRMT5; SKB1  --  has similar expression pattern (mutual information value=0.910552) with  --  ATNUP160; NUP160; SAR1
59 AT1G16870  --  has similar expression pattern (mutual information value=0.871573) with  --  ATPRMT5; PRMT5; SKB1  --  has similar expression pattern (mutual information value=0.936514) with  --  AT4G38890
60 AT1G16870  --  has similar expression pattern (mutual information value=0.815163) with  --  ATBT1; EMB104; EMB42; SHS1  --  transport  --  Sugar
61 AT1G16870  --  has similar expression pattern (mutual information value=0.956092) with  --  AT3G58610  --  has similar expression pattern (mutual information value=0.827691) with  --  ILA
62 AT1G16870  --  has similar expression pattern (mutual information value=0.956092) with  --  AT3G58610  --  has similar expression pattern (mutual information value=0.817238) with  --  ATTIC110; TIC110
63 AT1G16870  --  has similar expression pattern (mutual information value=0.956092) with  --  AT3G58610  --  has similar expression pattern (mutual information value=0.848999) with  --  AT3G14390
64 AT1G16870  --  has similar expression pattern (mutual information value=0.956092) with  --  AT3G58610  --  has similar expression pattern (mutual information value=0.848999) with  --  AT5G11880
65 AT1G16870  --  has similar expression pattern (mutual information value=0.956092) with  --  AT3G58610  --  has product (in catalytic reaction)  --  (S)-2-Acetolactate
66 AT1G16870  --  has similar expression pattern (mutual information value=1.04192) with  --  AT5G15810  --  has similar expression pattern (mutual information value=1.22107) with  --  NOP56
67 AT1G16870  --  has similar expression pattern (mutual information value=1.04192) with  --  AT5G15810  --  has similar expression pattern (mutual information value=0.894353) with  --  ABCF3; ATGCN3; GCN3
68 AT1G16870  --  has similar expression pattern (mutual information value=1.04192) with  --  AT5G15810  --  has similar expression pattern (mutual information value=0.93571) with  --  AT3G01790
69 AT1G16870  --  has similar expression pattern (mutual information value=1.04192) with  --  AT5G15810  --  has similar expression pattern (mutual information value=0.82979) with  --  STRS1
70 AT1G16870  --  has similar expression pattern (mutual information value=1.04192) with  --  AT5G15810  --  has similar expression pattern (mutual information value=1.21466) with  --  ATEIF3E-1; ATINT6; EIF3E; INT-6; INT6; TIF3E1
71 AT1G16870  --  has similar expression pattern (mutual information value=1.04192) with  --  AT5G15810  --  has similar expression pattern (mutual information value=0.906587) with  --  DegP9
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