Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G34290
Type: Protein GRN ID: np32697 Name:
Annotation: SWIB/MDM2 domain superfamily protein
Gene Locus: AT4G34290
Gene Expression (Affy ATH1 probeset): 253233_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G34290  --  has similar expression pattern (mutual information value=0.861879) with  --  AT2G44640
3 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108
4 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522
5 AT4G34290  --  has similar expression pattern (mutual information value=0.856553) with  --  AT3G04650
6 AT4G34290  --  has similar expression pattern (mutual information value=0.836781) with  --  RFC3
7 AT4G34290  --  has similar expression pattern (mutual information value=0.832423) with  --  AT5G11480
8 AT4G34290  --  has similar expression pattern (mutual information value=0.815637) with  --  ARC11; ATMIND1; MIND
9 AT4G34290  --  has similar expression pattern (mutual information value=0.861879) with  --  AT2G44640  --  has similar expression pattern (mutual information value=0.872731) with  --  EMB1047; EMB156; EMB36; FTSH12
10 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  interacts with  --  RPL24; RPL24B; STV1
11 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.912674) with  --  EMB2001
12 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.08862) with  --  OTP81
13 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.871385) with  --  AT2G37500
14 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.806973) with  --  ATCAF1; CAF1
15 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.05337) with  --  CPZ; TRZ2
16 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.00052) with  --  AtHsp90.5; CR88; EMB1956; Hsp88.1; HSP90.5
17 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.991737) with  --  AT1G48570
18 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.04803) with  --  AT1G48460
19 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.879081) with  --  GYRB1
20 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.879081) with  --  GYRB2
21 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.912315) with  --  GYRA
22 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.935625) with  --  AT3G15460
23 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.904589) with  --  PYRB
24 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.969647) with  --  AT3G20240
25 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.929483) with  --  AtSHMT3; SHM3
26 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.23941) with  --  PDE340
27 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.971257) with  --  ATFTSZ1-1; CPFTSZ; FTSZ1-1
28 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.917271) with  --  ATIPT9
29 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  transport  --  meso-Tartaric acid
30 AT4G34290  --  has similar expression pattern (mutual information value=0.802456) with  --  EMB3108  --  transport  --  Citrate
31 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  interacts with  --  CRB; CSP41B; HIP1.3
32 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.07576) with  --  MRL7-L
33 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.979059) with  --  ATRAP; RAP
34 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.06573) with  --  AT1G56050
35 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.1025) with  --  AT1G11430
36 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.92106) with  --  AT3G10350
37 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.15808) with  --  TRX P; TRX z
38 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.09216) with  --  AT3G21300
39 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.14962) with  --  AT3G18420
40 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.998797) with  --  OSB2; PTAC9
41 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.04123) with  --  AT4G26370
42 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.27075) with  --  EMB1923
43 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.897886) with  --  AT4G38020
44 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.970528) with  --  PDE312; PTAC10
45 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.05762) with  --  FLN1
46 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.913452) with  --  AT3G59980
47 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.997024) with  --  FSD3
48 AT4G34290  --  has similar expression pattern (mutual information value=1.14147) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.05034) with  --  SVR7
49 AT4G34290  --  has similar expression pattern (mutual information value=0.836781) with  --  RFC3  --  has similar expression pattern (mutual information value=0.972094) with  --  CS26
50 AT4G34290  --  has similar expression pattern (mutual information value=0.836781) with  --  RFC3  --  has similar expression pattern (mutual information value=0.934441) with  --  EMB1241
51 AT4G34290  --  has similar expression pattern (mutual information value=0.832423) with  --  AT5G11480  --  has similar expression pattern (mutual information value=0.926283) with  --  SKL2
52 AT4G34290  --  has similar expression pattern (mutual information value=0.832423) with  --  AT5G11480  --  has similar expression pattern (mutual information value=0.960543) with  --  FIONA; SYCO ARATH
53 AT4G34290  --  has similar expression pattern (mutual information value=0.832423) with  --  AT5G11480  --  has similar expression pattern (mutual information value=0.926374) with  --  AT1G36390
54 AT4G34290  --  has similar expression pattern (mutual information value=0.832423) with  --  AT5G11480  --  has similar expression pattern (mutual information value=0.967454) with  --  AT5G11450
55 AT4G34290  --  has similar expression pattern (mutual information value=0.815637) with  --  ARC11; ATMIND1; MIND  --  interacts with  --  ARC12; ATMINE1; MINE1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact