Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node OTC
Type: Protein GRN ID: np14296 Name: OTC
Annotation: OTC | ornithine carbamoyltransferase [EC:2.1.3.3]
Gene Locus: AT1G75330
Gene Expression (Affy ATH1 probeset): 261122_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 OTC  --  has product (in catalytic reaction)  --  L-Citrulline
3 OTC  --  interacts with  --  TGA1
4 OTC  --  has similar expression pattern (mutual information value=0.849374) with  --  RPS10
5 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6
6 OTC  --  has similar expression pattern (mutual information value=0.892713) with  --  PYRB
7 OTC  --  has product (in catalytic reaction)  --  L-Citrulline  --  has product (in catalytic reaction)  --  N-(L-Arginino)succinate
8 OTC  --  has product (in catalytic reaction)  --  L-Citrulline  --  is product (in catalytic reaction) of  --  L-Ornithine
9 OTC  --  has product (in catalytic reaction)  --  L-Citrulline  --  is product (in catalytic reaction) of  --  Carbamoyl phosphate
10 OTC  --  has product (in catalytic reaction)  --  L-Citrulline  --  is product (in catalytic reaction) of  --  ATNOA1; ATNOS1; NOA1; NOS1; RIF1
11 OTC  --  has product (in catalytic reaction)  --  L-Citrulline  --  is product (in catalytic reaction) of  --  L-Arginine
12 OTC  --  interacts with  --  TGA1  --  regulates the expression of   --  PR1
13 OTC  --  interacts with  --  TGA1  --  interacts with  --  emb2386
14 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT1G13350
15 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT1G30230
16 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT-EXP1; ATEXP1; ATEXPA1; ATHEXP ALPHA 1.2; EXP1; EXPA1
17 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT2G02510
18 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT2G21580
19 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT3G01820
20 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT3G20390
21 OTC  --  interacts with  --  TGA1  --  interacts with  --  ALDH2; ALDH2A; ALDH2B4
22 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT3G53190
23 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT4G15160
24 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT4G16450
25 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT4G18100
26 OTC  --  interacts with  --  TGA1  --  interacts with  --  ATGLB3; GLB3
27 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT5G02450
28 OTC  --  interacts with  --  TGA1  --  interacts with  --  EMB3010; RPS6B
29 OTC  --  interacts with  --  TGA1  --  interacts with  --  ATSPX1; SPX1
30 OTC  --  interacts with  --  TGA1  --  interacts with  --  RUG2
31 OTC  --  interacts with  --  TGA1  --  interacts with  --  HCT
32 OTC  --  interacts with  --  TGA1  --  interacts with  --  ATRBP45A; RBP45A
33 OTC  --  interacts with  --  TGA1  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2
34 OTC  --  interacts with  --  TGA1  --  interacts with  --  ADF3
35 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT5G66930
36 OTC  --  interacts with  --  TGA1  --  interacts with  --  ASK3; SK3
37 OTC  --  interacts with  --  TGA1  --  interacts with  --  AT2G38300
38 OTC  --  interacts with  --  TGA1  --  interacts with  --  ATNPR4; NPR4
39 OTC  --  interacts with  --  TGA1  --  interacts with  --  NPR1 /NIM1
40 OTC  --  has similar expression pattern (mutual information value=0.849374) with  --  RPS10  --  has similar expression pattern (mutual information value=1.16422) with  --  EMB2762
41 OTC  --  has similar expression pattern (mutual information value=0.849374) with  --  RPS10  --  has similar expression pattern (mutual information value=1.06871) with  --  AT1G80750
42 OTC  --  has similar expression pattern (mutual information value=0.849374) with  --  RPS10  --  has similar expression pattern (mutual information value=1.14326) with  --  AT1G28395
43 OTC  --  has similar expression pattern (mutual information value=0.849374) with  --  RPS10  --  has similar expression pattern (mutual information value=1.103) with  --  RPS2
44 OTC  --  has similar expression pattern (mutual information value=0.849374) with  --  RPS10  --  has similar expression pattern (mutual information value=1.14318) with  --  AT3G07110
45 OTC  --  has similar expression pattern (mutual information value=0.849374) with  --  RPS10  --  has similar expression pattern (mutual information value=0.904448) with  --  SAPX
46 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  interacts with  --  CARB; VEN3
47 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.964431) with  --  AT1G77940
48 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.972231) with  --  AT1G55890
49 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.859264) with  --  emb2742
50 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=1.06694) with  --  RACK1B; RACK1B_AT
51 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.901042) with  --  AT1G16870
52 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.822059) with  --  ATIMPALPHA3; IMPA-3; MOS6
53 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.957329) with  --  emb1027
54 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.839752) with  --  ADSS
55 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.876332) with  --  AT3G58610
56 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.853539) with  --  AT5G10010
57 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=1.01198) with  --  AT5G58420
58 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=0.964462) with  --  AT5G61170
59 OTC  --  has similar expression pattern (mutual information value=0.91984) with  --  CARA; VEN6  --  has similar expression pattern (mutual information value=1.04933) with  --  AT5G16130
60 OTC  --  has similar expression pattern (mutual information value=0.892713) with  --  PYRB  --  has similar expression pattern (mutual information value=0.825007) with  --  AT2G35040
61 OTC  --  has similar expression pattern (mutual information value=0.892713) with  --  PYRB  --  has similar expression pattern (mutual information value=0.902519) with  --  AT2G37500
62 OTC  --  has similar expression pattern (mutual information value=0.892713) with  --  PYRB  --  has similar expression pattern (mutual information value=0.904589) with  --  EMB3108
63 OTC  --  has similar expression pattern (mutual information value=0.892713) with  --  PYRB  --  has similar expression pattern (mutual information value=0.87219) with  --  EMB1047; EMB156; EMB36; FTSH12
64 OTC  --  has similar expression pattern (mutual information value=0.892713) with  --  PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14
65 OTC  --  has similar expression pattern (mutual information value=0.892713) with  --  PYRB  --  has similar expression pattern (mutual information value=1.16818) with  --  GYRA
66 OTC  --  has similar expression pattern (mutual information value=0.892713) with  --  PYRB  --  has similar expression pattern (mutual information value=0.898144) with  --  AT3G15460
67 OTC  --  has similar expression pattern (mutual information value=0.892713) with  --  PYRB  --  has similar expression pattern (mutual information value=0.980447) with  --  PDE340
68 OTC  --  has similar expression pattern (mutual information value=0.892713) with  --  PYRB  --  has product (in catalytic reaction)  --  N-Carbamoyl-L-aspartate
69 OTC  --  has similar expression pattern (mutual information value=0.892713) with  --  PYRB  --  is the target gene of  --  ath-miR5640
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact