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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G49080
Type: Protein GRN ID: np26107 Name:
Annotation: Ribosomal protein S5 domain 2-like superfamily protein
Gene Locus: AT3G49080
Gene Expression (Affy ATH1 probeset): 252287_at    252288_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990
3 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A
4 AT3G49080  --  has similar expression pattern (mutual information value=0.97885) with  --  AT2G21580
5 AT3G49080  --  has similar expression pattern (mutual information value=1.08002) with  --  AT2G28600
6 AT3G49080  --  has similar expression pattern (mutual information value=0.994723) with  --  AT1G80750
7 AT3G49080  --  has similar expression pattern (mutual information value=1.08057) with  --  AT3G05560
8 AT3G49080  --  has similar expression pattern (mutual information value=0.860014) with  --  YAO
9 AT3G49080  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G44590
10 AT3G49080  --  has similar expression pattern (mutual information value=1.02208) with  --  AT3G57490
11 AT3G49080  --  has similar expression pattern (mutual information value=1.06204) with  --  AT3G58700
12 AT3G49080  --  has similar expression pattern (mutual information value=0.951869) with  --  AT2G39795
13 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.970917) with  --  AT2G44860
14 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.02165) with  --  AT2G19750
15 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.856248) with  --  AT2G37400
16 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.830549) with  --  AT1G04590
17 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.953513) with  --  TPR3
18 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.912238) with  --  AT1G23280
19 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.11767) with  --  PPR596
20 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.987924) with  --  AT3G06680
21 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.936368) with  --  AT3G13940
22 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.920806) with  --  AT3G25940
23 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.06638) with  --  AT1G07070
24 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.851457) with  --  STRS1
25 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.02491) with  --  AT4G28450
26 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.04396) with  --  AT4G29410
27 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.982585) with  --  ROC2
28 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.00523) with  --  AT5G14050
29 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.09825) with  --  TIM8
30 AT3G49080  --  has similar expression pattern (mutual information value=1.04773) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.868014) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
31 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  interacts with  --  AT5G61200
32 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  interacts with  --  AtMC9; AtMCP2f; MC9; MCP2f
33 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.06679) with  --  AT2G44120
34 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=0.950973) with  --  RPL10B
35 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.21676) with  --  AT1G70600
36 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.21676) with  --  RPL27A; RPL27AB
37 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.39726) with  --  AT1G77940
38 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.06563) with  --  RPL10; RPL10A; SAC52
39 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.08517) with  --  AT1G29250
40 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.16077) with  --  AT2G43460
41 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.02727) with  --  RPL18
42 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.54842) with  --  AT3G07110
43 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.1895) with  --  AT3G09680
44 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.1895) with  --  AT5G02960
45 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.19596) with  --  AT3G18740
46 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.14108) with  --  AT3G22230
47 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.15482) with  --  RACK1B; RACK1B_AT
48 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.17469) with  --  AT4G29390
49 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.04397) with  --  RPS6; RPS6A
50 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.41097) with  --  EMB1080
51 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.26449) with  --  AT5G03850
52 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.04579) with  --  AT5G47700
53 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.35826) with  --  AT5G58420
54 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.28304) with  --  AT5G60670
55 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.53774) with  --  AT5G16130
56 AT3G49080  --  has similar expression pattern (mutual information value=1.02739) with  --  RPL24A  --  has similar expression pattern (mutual information value=1.22107) with  --  AT4G16720
57 AT3G49080  --  has similar expression pattern (mutual information value=0.97885) with  --  AT2G21580  --  interacts with  --  TGA1
58 AT3G49080  --  has similar expression pattern (mutual information value=0.97885) with  --  AT2G21580  --  has similar expression pattern (mutual information value=0.941798) with  --  AT3G12370
59 AT3G49080  --  has similar expression pattern (mutual information value=0.97885) with  --  AT2G21580  --  has similar expression pattern (mutual information value=1.18982) with  --  AT3G60770
60 AT3G49080  --  has similar expression pattern (mutual information value=0.97885) with  --  AT2G21580  --  has similar expression pattern (mutual information value=1.06234) with  --  AT5G02450
61 AT3G49080  --  has similar expression pattern (mutual information value=0.97885) with  --  AT2G21580  --  has similar expression pattern (mutual information value=1.1755) with  --  AT5G47930
62 AT3G49080  --  has similar expression pattern (mutual information value=0.97885) with  --  AT2G21580  --  has similar expression pattern (mutual information value=1.21285) with  --  AT5G56670
63 AT3G49080  --  has similar expression pattern (mutual information value=0.97885) with  --  AT2G21580  --  has similar expression pattern (mutual information value=1.19536) with  --  RPS28
64 AT3G49080  --  has similar expression pattern (mutual information value=1.08002) with  --  AT2G28600  --  has similar expression pattern (mutual information value=0.968747) with  --  AT2G18330
65 AT3G49080  --  has similar expression pattern (mutual information value=1.08002) with  --  AT2G28600  --  has similar expression pattern (mutual information value=0.850259) with  --  AT1G73180
66 AT3G49080  --  has similar expression pattern (mutual information value=1.08002) with  --  AT2G28600  --  has similar expression pattern (mutual information value=1.00899) with  --  AT1G77550
67 AT3G49080  --  has similar expression pattern (mutual information value=1.08002) with  --  AT2G28600  --  has similar expression pattern (mutual information value=0.811682) with  --  ATEIF3G2; EIF3G2
68 AT3G49080  --  has similar expression pattern (mutual information value=1.08002) with  --  AT2G28600  --  has similar expression pattern (mutual information value=0.899816) with  --  EIF(ISO)4E; EIF4E2; eIFiso4E; LSP; LSP1
69 AT3G49080  --  has similar expression pattern (mutual information value=1.08002) with  --  AT2G28600  --  has similar expression pattern (mutual information value=0.890629) with  --  AT5G65860
70 AT3G49080  --  has similar expression pattern (mutual information value=0.994723) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.06789) with  --  EMB2762
71 AT3G49080  --  has similar expression pattern (mutual information value=0.994723) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.10677) with  --  NOP56
72 AT3G49080  --  has similar expression pattern (mutual information value=0.994723) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.00743) with  --  RPSAb
73 AT3G49080  --  has similar expression pattern (mutual information value=0.994723) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.06871) with  --  RPS10
74 AT3G49080  --  has similar expression pattern (mutual information value=0.994723) with  --  AT1G80750  --  has similar expression pattern (mutual information value=0.92467) with  --  PYRB
75 AT3G49080  --  has similar expression pattern (mutual information value=0.994723) with  --  AT1G80750  --  has similar expression pattern (mutual information value=0.880674) with  --  AT.EIF4E1; CUM1; EIF4E; eIF4E1
76 AT3G49080  --  has similar expression pattern (mutual information value=0.994723) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.04173) with  --  AT5G10010
77 AT3G49080  --  has similar expression pattern (mutual information value=0.994723) with  --  AT1G80750  --  has similar expression pattern (mutual information value=1.13915) with  --  ATEBP1; ATG2; EBP1
78 AT3G49080  --  has similar expression pattern (mutual information value=1.08057) with  --  AT3G05560  --  interacts with  --  AHL27; ESC; ORE7
79 AT3G49080  --  has similar expression pattern (mutual information value=1.08057) with  --  AT3G05560  --  has similar expression pattern (mutual information value=1.09707) with  --  AT2G19730
80 AT3G49080  --  has similar expression pattern (mutual information value=1.08057) with  --  AT3G05560  --  has similar expression pattern (mutual information value=1.06076) with  --  AT1G27400
81 AT3G49080  --  has similar expression pattern (mutual information value=1.08057) with  --  AT3G05560  --  has similar expression pattern (mutual information value=0.942524) with  --  DECOY
82 AT3G49080  --  has similar expression pattern (mutual information value=1.08057) with  --  AT3G05560  --  has similar expression pattern (mutual information value=1.02774) with  --  AT1G74270
83 AT3G49080  --  has similar expression pattern (mutual information value=1.08057) with  --  AT3G05560  --  has similar expression pattern (mutual information value=1.15898) with  --  AT3G23390
84 AT3G49080  --  has similar expression pattern (mutual information value=1.08057) with  --  AT3G05560  --  has similar expression pattern (mutual information value=0.8219) with  --  AT2G34050
85 AT3G49080  --  has similar expression pattern (mutual information value=1.08057) with  --  AT3G05560  --  has similar expression pattern (mutual information value=1.23134) with  --  AT4G25740
86 AT3G49080  --  has similar expression pattern (mutual information value=1.08057) with  --  AT3G05560  --  has similar expression pattern (mutual information value=1.19988) with  --  AT5G52650
87 AT3G49080  --  has similar expression pattern (mutual information value=1.08057) with  --  AT3G05560  --  has similar expression pattern (mutual information value=1.15124) with  --  AT5G09510
88 AT3G49080  --  has similar expression pattern (mutual information value=0.860014) with  --  YAO  --  has similar expression pattern (mutual information value=1.02733) with  --  AT2G18900
89 AT3G49080  --  has similar expression pattern (mutual information value=0.860014) with  --  YAO  --  has similar expression pattern (mutual information value=0.938051) with  --  AT1G18850
90 AT3G49080  --  has similar expression pattern (mutual information value=0.860014) with  --  YAO  --  has similar expression pattern (mutual information value=1.03643) with  --  EMB1860; TIM50
91 AT3G49080  --  has similar expression pattern (mutual information value=0.860014) with  --  YAO  --  has similar expression pattern (mutual information value=0.86386) with  --  MEE49
92 AT3G49080  --  has similar expression pattern (mutual information value=0.860014) with  --  YAO  --  has similar expression pattern (mutual information value=0.843136) with  --  ATMSI1; MEE70; MSI1
93 AT3G49080  --  has similar expression pattern (mutual information value=0.860014) with  --  YAO  --  has similar expression pattern (mutual information value=1.06216) with  --  AT5G60990
94 AT3G49080  --  has similar expression pattern (mutual information value=0.860014) with  --  YAO  --  has similar expression pattern (mutual information value=1.00241) with  --  AT1G30240
95 AT3G49080  --  has similar expression pattern (mutual information value=0.860014) with  --  YAO  --  is the target gene of  --  ath-miR414
96 AT3G49080  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G44590  --  interacts with  --  emb2004
97 AT3G49080  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G44590  --  interacts with  --  AT1G55880
98 AT3G49080  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G44590  --  interacts with  --  AT1G01100
99 AT3G49080  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G44590  --  interacts with  --  GASA5
100 AT3G49080  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G44590  --  has similar expression pattern (mutual information value=0.938729) with  --  AT2G41840
101 AT3G49080  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.0477) with  --  AT3G04920
102 AT3G49080  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.22642) with  --  AtGRP4; GR-RBP4; GRP4
103 AT3G49080  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.06528) with  --  TOM40
104 AT3G49080  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.19701) with  --  AT2G33370
105 AT3G49080  --  has similar expression pattern (mutual information value=1.1136) with  --  AT3G44590  --  has similar expression pattern (mutual information value=1.41628) with  --  AT5G59850
106 AT3G49080  --  has similar expression pattern (mutual information value=1.02208) with  --  AT3G57490  --  has similar expression pattern (mutual information value=0.93846) with  --  AT3G16080
107 AT3G49080  --  has similar expression pattern (mutual information value=1.02208) with  --  AT3G57490  --  has similar expression pattern (mutual information value=0.871916) with  --  AT5G56710
108 AT3G49080  --  has similar expression pattern (mutual information value=1.06204) with  --  AT3G58700  --  has similar expression pattern (mutual information value=0.992329) with  --  AT1G52930
109 AT3G49080  --  has similar expression pattern (mutual information value=1.06204) with  --  AT3G58700  --  has similar expression pattern (mutual information value=0.955516) with  --  AT3G03920
110 AT3G49080  --  has similar expression pattern (mutual information value=0.951869) with  --  AT2G39795  --  interacts with  --  AtMYB51; BW51A; BW51B; HIG1; MYB51
111 AT3G49080  --  has similar expression pattern (mutual information value=0.951869) with  --  AT2G39795  --  has similar expression pattern (mutual information value=0.95607) with  --  AT2G20060
112 AT3G49080  --  has similar expression pattern (mutual information value=0.951869) with  --  AT2G39795  --  has similar expression pattern (mutual information value=0.980971) with  --  AT3G18760
113 AT3G49080  --  has similar expression pattern (mutual information value=0.951869) with  --  AT2G39795  --  has similar expression pattern (mutual information value=0.958907) with  --  AT3G55605
114 AT3G49080  --  has similar expression pattern (mutual information value=0.951869) with  --  AT2G39795  --  has similar expression pattern (mutual information value=1.02439) with  --  ATRBP45A; RBP45A
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