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Location:  Home > Details for node AT5G11880
Type: Protein GRN ID: np37536 Name:
Annotation: Pyridoxal-dependent decarboxylase family protein [TCDB:3.D.1.1] [TCDB:3.D.1.2] [TCDB:3.D.1.3] [TCDB:3.D.1.5] [TCDB:3.D.1.6] [EC:4.1.1.20]
Gene Locus: AT5G11880
Gene Expression (Affy ATH1 probeset): 258365_s_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine
3 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA
4 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT
5 AT5G11880  --  has similar expression pattern (mutual information value=1.15203) with  --  ADSS
6 AT5G11880  --  has similar expression pattern (mutual information value=0.848999) with  --  AT3G58610
7 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  has product (in catalytic reaction)  --  L-Lysyl-tRNA
8 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  is product (in catalytic reaction) of  --  meso-2,6-Diaminoheptanedioate
9 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  is transported by  --  COX1
10 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  is transported by  --  NAD2; NAD2.2; NAD2B
11 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  is transported by  --  NAD3
12 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  is transported by  --  NAD4L
13 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  is transported by  --  NAD4
14 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  is transported by  --  NAD1; NAD1C
15 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  is transported by  --  NAD5; NAD5.1; NAD5A
16 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  is transported by  --  NAD7
17 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  is transported by  --  NAD2; NAD2.1; NAD2A
18 AT5G11880  --  has product (in catalytic reaction)  --  L-Lysine  --  is transported by  --  AT5G11230
19 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  interacts with  --  GYRB1
20 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=0.944252) with  --  AT2G37500
21 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=0.912315) with  --  EMB3108
22 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=0.887141) with  --  AtHsp90.5; CR88; EMB1956; Hsp88.1; HSP90.5
23 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=0.925655) with  --  EMB1047; EMB156; EMB36; FTSH12
24 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=0.808948) with  --  AT1G63660
25 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=1.16818) with  --  PYRB
26 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=0.837925) with  --  AtSHMT3; SHM3
27 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=0.969513) with  --  ATPURM; EMB2818; PUR5
28 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=0.891117) with  --  AT5G10920
29 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=0.897596) with  --  PYRD
30 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=0.804082) with  --  ATOEP80; EMB213; OEP80; TOC75-V
31 AT5G11880  --  has similar expression pattern (mutual information value=0.97036) with  --  GYRA  --  has similar expression pattern (mutual information value=0.862361) with  --  AT-RAB2; ATRAB-B1B; ATRAB2A; ATRABB1C; RAB-B1B; RAB2A; RABB1C
32 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  interacts with  --  ftsh3
33 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  interacts with  --  ATWNK8; EIP1; WNK8
34 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  interacts with  --  PIRL4
35 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  interacts with  --  AT5G48650
36 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  interacts with  --  AT5G43960
37 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  interacts with  --  SE
38 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.15482) with  --  RPL24A
39 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.846337) with  --  AT1G14810
40 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.20648) with  --  AT1G77940
41 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.16573) with  --  AT3G04840
42 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.06694) with  --  CARA; VEN6
43 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.808565) with  --  ATIMPALPHA3; IMPA-3; MOS6
44 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=0.851738) with  --  AT4G24830
45 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.20587) with  --  AT5G58420
46 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.09828) with  --  AT5G60670
47 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.21416) with  --  AT5G61170
48 AT5G11880  --  has similar expression pattern (mutual information value=0.997471) with  --  RACK1B; RACK1B_AT  --  has similar expression pattern (mutual information value=1.26789) with  --  AT5G16130
49 AT5G11880  --  has similar expression pattern (mutual information value=1.15203) with  --  ADSS  --  has similar expression pattern (mutual information value=0.883689) with  --  OMR1
50 AT5G11880  --  has similar expression pattern (mutual information value=1.15203) with  --  ADSS  --  has similar expression pattern (mutual information value=0.838733) with  --  PYRR; UPP
51 AT5G11880  --  has similar expression pattern (mutual information value=1.15203) with  --  ADSS  --  has product (in catalytic reaction)  --  N6-(1,2-Dicarboxyethyl)-AMP
52 AT5G11880  --  has similar expression pattern (mutual information value=1.15203) with  --  ADSS  --  has product (in catalytic reaction)  --  GDP
53 AT5G11880  --  has similar expression pattern (mutual information value=0.848999) with  --  AT3G58610  --  has similar expression pattern (mutual information value=0.827691) with  --  ILA
54 AT5G11880  --  has similar expression pattern (mutual information value=0.848999) with  --  AT3G58610  --  has similar expression pattern (mutual information value=0.83675) with  --  ERD14
55 AT5G11880  --  has similar expression pattern (mutual information value=0.848999) with  --  AT3G58610  --  has similar expression pattern (mutual information value=0.817238) with  --  ATTIC110; TIC110
56 AT5G11880  --  has similar expression pattern (mutual information value=0.848999) with  --  AT3G58610  --  has similar expression pattern (mutual information value=0.865625) with  --  emb2742
57 AT5G11880  --  has similar expression pattern (mutual information value=0.848999) with  --  AT3G58610  --  has similar expression pattern (mutual information value=0.956092) with  --  AT1G16870
58 AT5G11880  --  has similar expression pattern (mutual information value=0.848999) with  --  AT3G58610  --  has similar expression pattern (mutual information value=1.01851) with  --  CARB; VEN3
59 AT5G11880  --  has similar expression pattern (mutual information value=0.848999) with  --  AT3G58610  --  has product (in catalytic reaction)  --  (S)-2-Acetolactate
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