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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node PDE340
Type: Protein GRN ID: np41460 Name: PDE340
Annotation: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Gene Locus: AT5G08610
Gene Expression (Affy ATH1 probeset): 250529_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 PDE340  --  has similar expression pattern (mutual information value=0.993205) with  --  EMB2001
3 PDE340  --  has similar expression pattern (mutual information value=0.853511) with  --  PDE319; SCA3
4 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2
5 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108
6 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522
7 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12
8 PDE340  --  has similar expression pattern (mutual information value=0.976074) with  --  AT1G48570
9 PDE340  --  has similar expression pattern (mutual information value=1.08498) with  --  AT1G48460
10 PDE340  --  has similar expression pattern (mutual information value=0.836319) with  --  GYRB1
11 PDE340  --  has similar expression pattern (mutual information value=0.836319) with  --  GYRB2
12 PDE340  --  has similar expression pattern (mutual information value=0.984868) with  --  AT3G21300
13 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB
14 PDE340  --  has similar expression pattern (mutual information value=0.910795) with  --  AT1G72040
15 PDE340  --  has similar expression pattern (mutual information value=0.97784) with  --  AT4G27340
16 PDE340  --  has similar expression pattern (mutual information value=1.09222) with  --  AT4G31210
17 PDE340  --  has similar expression pattern (mutual information value=0.84096) with  --  AT5G23070
18 PDE340  --  has similar expression pattern (mutual information value=0.993205) with  --  EMB2001  --  has similar expression pattern (mutual information value=0.897155) with  --  AT5G64816
19 PDE340  --  has similar expression pattern (mutual information value=0.853511) with  --  PDE319; SCA3  --  has product (in catalytic reaction)  --  RNA
20 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=0.859429) with  --  AT2G37500
21 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=1.04819) with  --  MRL7-L
22 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=1.0623) with  --  AT1G56050
23 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=0.80916) with  --  FLN2
24 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=0.860939) with  --  AT1G71460
25 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=0.812746) with  --  AT3G04650
26 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=1.0121) with  --  RFC3
27 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=1.03085) with  --  PDE312; PTAC10
28 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=0.871512) with  --  AT3G63510
29 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=0.919528) with  --  AT5G10910
30 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=0.88393) with  --  AT5G48470
31 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=0.954795) with  --  ATFTSZ1-1; CPFTSZ; FTSZ1-1
32 PDE340  --  has similar expression pattern (mutual information value=1.08727) with  --  CPZ; TRZ2  --  has similar expression pattern (mutual information value=0.943532) with  --  ATIPT9
33 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108  --  interacts with  --  RPL24; RPL24B; STV1
34 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.08862) with  --  OTP81
35 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.806973) with  --  ATCAF1; CAF1
36 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108  --  has similar expression pattern (mutual information value=1.00052) with  --  AtHsp90.5; CR88; EMB1956; Hsp88.1; HSP90.5
37 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.912315) with  --  GYRA
38 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.935625) with  --  AT3G15460
39 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.969647) with  --  AT3G20240
40 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.929483) with  --  AtSHMT3; SHM3
41 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108  --  has similar expression pattern (mutual information value=0.802456) with  --  AT4G34290
42 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108  --  transport  --  meso-Tartaric acid
43 PDE340  --  has similar expression pattern (mutual information value=1.23941) with  --  EMB3108  --  transport  --  Citrate
44 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  interacts with  --  CRB; CSP41B; HIP1.3
45 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.979059) with  --  ATRAP; RAP
46 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.1025) with  --  AT1G11430
47 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.92106) with  --  AT3G10350
48 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.15808) with  --  TRX P; TRX z
49 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.14962) with  --  AT3G18420
50 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.998797) with  --  OSB2; PTAC9
51 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.04123) with  --  AT4G26370
52 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.27075) with  --  EMB1923
53 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.897886) with  --  AT4G38020
54 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.05762) with  --  FLN1
55 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.913452) with  --  AT3G59980
56 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=0.997024) with  --  FSD3
57 PDE340  --  has similar expression pattern (mutual information value=0.888238) with  --  AT1G10522  --  has similar expression pattern (mutual information value=1.05034) with  --  SVR7
58 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.962935) with  --  AT2G39670
59 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.872731) with  --  AT2G44640
60 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=1.01333) with  --  ATSRS; OVA7; SRS
61 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=1.04547) with  --  CH-CPN60A; CPN60A; SLP
62 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=1.03425) with  --  ATTIC110; TIC110
63 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.857909) with  --  cpHsc70-1
64 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.960332) with  --  PYRR; UPP
65 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.831237) with  --  ARC6
66 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.898494) with  --  OVA6; PRORS1
67 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.890406) with  --  EMB3144
68 PDE340  --  has similar expression pattern (mutual information value=0.904973) with  --  EMB1047; EMB156; EMB36; FTSH12  --  has similar expression pattern (mutual information value=0.815963) with  --  ATOEP80; EMB213; OEP80; TOC75-V
69 PDE340  --  has similar expression pattern (mutual information value=0.976074) with  --  AT1G48570  --  has similar expression pattern (mutual information value=0.84413) with  --  AT1G28530
70 PDE340  --  has similar expression pattern (mutual information value=0.976074) with  --  AT1G48570  --  has similar expression pattern (mutual information value=0.814121) with  --  DegP10
71 PDE340  --  has similar expression pattern (mutual information value=1.08498) with  --  AT1G48460  --  has similar expression pattern (mutual information value=0.856976) with  --  AT1G09900
72 PDE340  --  has similar expression pattern (mutual information value=1.08498) with  --  AT1G48460  --  has similar expression pattern (mutual information value=0.815475) with  --  BPG2
73 PDE340  --  has similar expression pattern (mutual information value=1.08498) with  --  AT1G48460  --  has similar expression pattern (mutual information value=0.805949) with  --  AT5G08400
74 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB  --  has similar expression pattern (mutual information value=0.825007) with  --  AT2G35040
75 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB  --  has similar expression pattern (mutual information value=0.92467) with  --  AT1G80750
76 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB  --  has similar expression pattern (mutual information value=0.863465) with  --  ERD14
77 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB  --  has similar expression pattern (mutual information value=0.892713) with  --  OTC
78 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB  --  has similar expression pattern (mutual information value=1.00962) with  --  RPS10
79 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB  --  has similar expression pattern (mutual information value=1.09995) with  --  CARA; VEN6
80 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB  --  has similar expression pattern (mutual information value=0.823075) with  --  AT1G16870
81 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB  --  has similar expression pattern (mutual information value=0.841877) with  --  AT3G58610
82 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB  --  has similar expression pattern (mutual information value=0.85383) with  --  AT5G10010
83 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB  --  has product (in catalytic reaction)  --  N-Carbamoyl-L-aspartate
84 PDE340  --  has similar expression pattern (mutual information value=0.980447) with  --  PYRB  --  is the target gene of  --  ath-miR5640
85 PDE340  --  has similar expression pattern (mutual information value=0.910795) with  --  AT1G72040  --  transport  --  Lithium
86 PDE340  --  has similar expression pattern (mutual information value=0.97784) with  --  AT4G27340  --  has similar expression pattern (mutual information value=0.818874) with  --  ACT8; FIZ1
87 PDE340  --  has similar expression pattern (mutual information value=0.97784) with  --  AT4G27340  --  is the target gene of  --  ath-miR835-3p
88 PDE340  --  has similar expression pattern (mutual information value=1.09222) with  --  AT4G31210  --  has similar expression pattern (mutual information value=0.82156) with  --  AT5G05990
89 PDE340  --  has similar expression pattern (mutual information value=1.09222) with  --  AT4G31210  --  transport  --  Nickel(2+)
90 PDE340  --  has similar expression pattern (mutual information value=0.84096) with  --  AT5G23070  --  has product (in catalytic reaction)  --  dTMP
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