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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G25940
Type: Protein GRN ID: np25578 Name:
Annotation: TFIIB zinc-binding protein
Gene Locus: AT3G25940
Gene Expression (Affy ATH1 probeset): 258079_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990
3 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605
4 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8
5 AT3G25940  --  has similar expression pattern (mutual information value=0.86209) with  --  AT5G61220
6 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.970917) with  --  AT2G44860
7 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.02165) with  --  AT2G19750
8 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.856248) with  --  AT2G37400
9 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.830549) with  --  AT1G04590
10 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.953513) with  --  TPR3
11 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.20913) with  --  AT2G28600
12 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.912238) with  --  AT1G23280
13 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.03263) with  --  AT1G80750
14 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.11767) with  --  PPR596
15 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.00437) with  --  AT3G05560
16 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.987924) with  --  AT3G06680
17 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.06638) with  --  AT1G07070
18 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.851457) with  --  STRS1
19 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.02491) with  --  AT4G28450
20 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.04396) with  --  AT4G29410
21 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.04773) with  --  AT3G49080
22 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.982585) with  --  ROC2
23 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.24519) with  --  AT3G57490
24 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.03098) with  --  AT3G58700
25 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.00523) with  --  AT5G14050
26 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.868014) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
27 AT3G25940  --  has similar expression pattern (mutual information value=0.920806) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.14112) with  --  AT2G39795
28 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  interacts with  --  AT5G47590
29 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.908839) with  --  AT1G63250
30 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.908839) with  --  AT2G07750
31 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.933687) with  --  AT2G35605
32 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.06889) with  --  AT2G25355
33 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.922185) with  --  AT2G18330
34 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.04833) with  --  AT1G51380
35 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.98257) with  --  TIM13
36 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.980911) with  --  ATRRP4; RRP4
37 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.13695) with  --  AT1G70350
38 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.956999) with  --  AT1G15250
39 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.03252) with  --  MEE67
40 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.03252) with  --  AT1G18320
41 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.905741) with  --  AT1G18850
42 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.901536) with  --  AT1G17510
43 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.980201) with  --  AT1G52930
44 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.94045) with  --  AT1G36310
45 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.06093) with  --  AAC42; ATRPAC42
46 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.948669) with  --  AT3G03920
47 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.07538) with  --  AT3G07750
48 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.05452) with  --  AT3G05810
49 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.984501) with  --  AT3G09890
50 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.99979) with  --  AT3G02650
51 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G19440
52 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.07989) with  --  ATPHB4; PHB4
53 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.09254) with  --  AT4G04940
54 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.85155) with  --  AT4G11120
55 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.938589) with  --  AR192
56 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G46210
57 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.0659) with  --  AT3G57000
58 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.826391) with  --  AT5G01230
59 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.841523) with  --  AT5G39840
60 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.94797) with  --  AT5G27395
61 AT3G25940  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.01086) with  --  AT5G16060
62 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.9377) with  --  AT2G45710
63 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.800429) with  --  AT2G19740
64 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.929693) with  --  TIM10
65 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.822349) with  --  ATPHB6; PHB6
66 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.822349) with  --  ATPHB1; PHB1
67 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.875358) with  --  AT1G28395
68 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=1.10165) with  --  AT1G29250
69 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.9882) with  --  AT2G43460
70 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.997961) with  --  AT1G74270
71 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.994091) with  --  AT3G23390
72 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=1.0485) with  --  AT3G18760
73 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=1.02446) with  --  AT3G18740
74 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.937072) with  --  AT4G12600
75 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.951584) with  --  RUXF
76 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.97674) with  --  AT5G03850
77 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.92969) with  --  AT5G56670
78 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.955056) with  --  RPS28
79 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  has similar expression pattern (mutual information value=0.927045) with  --  AT5G09510
80 AT3G25940  --  has similar expression pattern (mutual information value=0.951327) with  --  TIM8  --  interacts with  --  AJH2; CSN5; CSN5B
81 AT3G25940  --  has similar expression pattern (mutual information value=0.86209) with  --  AT5G61220  --  has similar expression pattern (mutual information value=0.845457) with  --  AT3G09700
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