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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G06680
Type: Protein GRN ID: np28752 Name:
Annotation: Ribosomal L29e protein family
Gene Locus: AT3G06680
Gene Expression (Affy ATH1 probeset): 258521_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G06680  --  has similar expression pattern (mutual information value=1.06623) with  --  AT2G19750
3 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990
4 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460
5 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390
6 AT3G06680  --  has similar expression pattern (mutual information value=0.977558) with  --  AT2G40510
7 AT3G06680  --  has similar expression pattern (mutual information value=0.977558) with  --  AT2G40590
8 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400
9 AT3G06680  --  has similar expression pattern (mutual information value=1.31694) with  --  AT4G29410
10 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8
11 AT3G06680  --  has similar expression pattern (mutual information value=1.15366) with  --  AT5G56710
12 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440
13 AT3G06680  --  has similar expression pattern (mutual information value=1.06623) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.00699) with  --  ATRPL23A; RPL23A; RPL23AA
14 AT3G06680  --  has similar expression pattern (mutual information value=1.06623) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.05101) with  --  AT1G26880
15 AT3G06680  --  has similar expression pattern (mutual information value=1.06623) with  --  AT2G19750  --  has similar expression pattern (mutual information value=0.827975) with  --  AT2G11910
16 AT3G06680  --  has similar expression pattern (mutual information value=1.06623) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.01097) with  --  AT3G22230
17 AT3G06680  --  has similar expression pattern (mutual information value=1.06623) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.12501) with  --  ROC2
18 AT3G06680  --  has similar expression pattern (mutual information value=1.06623) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.38618) with  --  AT5G59850
19 AT3G06680  --  has similar expression pattern (mutual information value=1.06623) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.21005) with  --  RPS28
20 AT3G06680  --  has similar expression pattern (mutual information value=1.06623) with  --  AT2G19750  --  has similar expression pattern (mutual information value=1.09968) with  --  AT5G09510
21 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.970917) with  --  AT2G44860
22 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.856248) with  --  AT2G37400
23 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.830549) with  --  AT1G04590
24 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.953513) with  --  TPR3
25 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.20913) with  --  AT2G28600
26 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.912238) with  --  AT1G23280
27 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.03263) with  --  AT1G80750
28 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.11767) with  --  PPR596
29 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.00437) with  --  AT3G05560
30 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.936368) with  --  AT3G13940
31 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.920806) with  --  AT3G25940
32 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.06638) with  --  AT1G07070
33 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.851457) with  --  STRS1
34 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.02491) with  --  AT4G28450
35 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.04773) with  --  AT3G49080
36 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.24519) with  --  AT3G57490
37 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.03098) with  --  AT3G58700
38 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.00523) with  --  AT5G14050
39 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.868014) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
40 AT3G06680  --  has similar expression pattern (mutual information value=0.987924) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.14112) with  --  AT2G39795
41 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  interacts with  --  AHL29; SOB3
42 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.16077) with  --  RPL24A
43 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.08485) with  --  AT1G70600
44 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.08485) with  --  RPL27A; RPL27AB
45 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.04287) with  --  AT1G29250
46 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=0.961392) with  --  AT1G74270
47 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.06917) with  --  AT3G09680
48 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.06917) with  --  AT5G02960
49 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.06041) with  --  AT3G18740
50 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.12472) with  --  AT4G33865
51 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.12115) with  --  AT3G43980
52 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.12115) with  --  AT3G44010
53 AT3G06680  --  has similar expression pattern (mutual information value=0.926681) with  --  AT2G43460  --  has similar expression pattern (mutual information value=1.18888) with  --  AT5G47930
54 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  interacts with  --  IAA11
55 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  interacts with  --  ATCSP3; CSP3
56 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  has similar expression pattern (mutual information value=0.918845) with  --  AT2G39390
57 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.20161) with  --  AT2G19730
58 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.06143) with  --  TIM10
59 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  has similar expression pattern (mutual information value=0.957725) with  --  AT2G18400
60 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  has similar expression pattern (mutual information value=0.923815) with  --  RPL18
61 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  has similar expression pattern (mutual information value=0.914212) with  --  AT3G06700
62 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.1374) with  --  AT3G16080
63 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.08171) with  --  AT3G44590
64 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.27508) with  --  AT5G03850
65 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.11526) with  --  AT5G27770
66 AT3G06680  --  has similar expression pattern (mutual information value=1.23778) with  --  AT3G23390  --  has similar expression pattern (mutual information value=1.14829) with  --  AT1G57860
67 AT3G06680  --  has similar expression pattern (mutual information value=0.977558) with  --  AT2G40510  --  has similar expression pattern (mutual information value=0.82453) with  --  AT1G01100
68 AT3G06680  --  has similar expression pattern (mutual information value=0.977558) with  --  AT2G40510  --  has similar expression pattern (mutual information value=1.02431) with  --  AT5G47700
69 AT3G06680  --  has similar expression pattern (mutual information value=0.977558) with  --  AT2G40590  --  interacts with  --  AT5G58720
70 AT3G06680  --  has similar expression pattern (mutual information value=0.977558) with  --  AT2G40590  --  interacts with  --  AT3G21490
71 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  interacts with  --  AT5G13810
72 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  interacts with  --  BOI; RING
73 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  interacts with  --  AT1G27020
74 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  interacts with  --  ATPUB14; PUB14
75 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  interacts with  --  DECOY
76 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=0.844802) with  --  AT1G09660
77 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=0.907704) with  --  AT2G40430
78 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=1.03305) with  --  AT2G31725
79 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=1.12407) with  --  AT1G73940
80 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=0.945294) with  --  AT3G02650
81 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=0.968146) with  --  AT3G52170
82 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=0.97362) with  --  AT3G57000
83 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=1.24633) with  --  AT3G59650
84 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=1.43315) with  --  AT3G60245
85 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=0.855878) with  --  ATUBA2; UBA 2
86 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=0.866756) with  --  AT5G44710
87 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=0.869359) with  --  ATPABN1; PABN1
88 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=1.19314) with  --  PNM1
89 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=0.916401) with  --  AT5G15610
90 AT3G06680  --  has similar expression pattern (mutual information value=0.831597) with  --  AT4G05400  --  has similar expression pattern (mutual information value=0.962752) with  --  AT2G41650
91 AT3G06680  --  has similar expression pattern (mutual information value=1.31694) with  --  AT4G29410  --  has similar expression pattern (mutual information value=1.1538) with  --  AT1G27400
92 AT3G06680  --  has similar expression pattern (mutual information value=1.31694) with  --  AT4G29410  --  has similar expression pattern (mutual information value=0.870655) with  --  EIF(ISO)4E; EIF4E2; eIFiso4E; LSP; LSP1
93 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8  --  has similar expression pattern (mutual information value=0.9377) with  --  AT2G45710
94 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8  --  has similar expression pattern (mutual information value=0.800429) with  --  AT2G19740
95 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8  --  has similar expression pattern (mutual information value=0.822349) with  --  ATPHB6; PHB6
96 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8  --  has similar expression pattern (mutual information value=0.822349) with  --  ATPHB1; PHB1
97 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8  --  has similar expression pattern (mutual information value=0.875358) with  --  AT1G28395
98 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8  --  has similar expression pattern (mutual information value=1.0485) with  --  AT3G18760
99 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8  --  has similar expression pattern (mutual information value=0.937072) with  --  AT4G12600
100 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8  --  has similar expression pattern (mutual information value=0.951584) with  --  RUXF
101 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8  --  has similar expression pattern (mutual information value=0.880692) with  --  AT3G55605
102 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8  --  has similar expression pattern (mutual information value=0.832345) with  --  AT5G61220
103 AT3G06680  --  has similar expression pattern (mutual information value=0.926911) with  --  TIM8  --  interacts with  --  AJH2; CSN5; CSN5B
104 AT3G06680  --  has similar expression pattern (mutual information value=1.15366) with  --  AT5G56710  --  has similar expression pattern (mutual information value=0.82155) with  --  SNRNP-G
105 AT3G06680  --  has similar expression pattern (mutual information value=1.15366) with  --  AT5G56710  --  has similar expression pattern (mutual information value=0.931986) with  --  AT1G09590
106 AT3G06680  --  has similar expression pattern (mutual information value=1.15366) with  --  AT5G56710  --  has similar expression pattern (mutual information value=0.931986) with  --  AT1G09690
107 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.848281) with  --  AT1G79470
108 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.857591) with  --  HSP60; HSP60-3B
109 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.971884) with  --  TOM40
110 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.973889) with  --  AT5G06550
111 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.845288) with  --  AT5G23250
112 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.907448) with  --  RID2
113 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.08756) with  --  AT1G23100
114 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.14956) with  --  AT1G04480
115 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.05455) with  --  AT2G25210
116 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.814196) with  --  AT1G01940
117 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.839603) with  --  AT1G06720
118 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.816413) with  --  AT1G73180
119 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.173) with  --  AT3G10090
120 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.08373) with  --  NFD1
121 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=0.850719) with  --  AT4G31985
122 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.15764) with  --  emb2474; TIM9
123 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  has similar expression pattern (mutual information value=1.04009) with  --  ATEBP1; ATG2; EBP1
124 AT3G06680  --  has similar expression pattern (mutual information value=0.813809) with  --  AT5G62440  --  interacts with  --  ARR5
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