Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G25120
Type: Protein GRN ID: np28993 Name:
Annotation: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [TCDB:3.A.18.1]
Gene Locus: AT3G25120
Gene Expression (Affy ATH1 probeset): 257818_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G25120  --  has similar expression pattern (mutual information value=0.847928) with  --  AT2G23940
3 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395
4 AT3G25120  --  has similar expression pattern (mutual information value=0.912334) with  --  AT5G20160
5 AT3G25120  --  has similar expression pattern (mutual information value=0.847928) with  --  AT2G23940  --  has similar expression pattern (mutual information value=1.12112) with  --  AT1G72170
6 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.44561) with  --  AT2G45710
7 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.26766) with  --  AT2G27775
8 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.10056) with  --  AT2G15000
9 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.37713) with  --  AT2G35790
10 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.32591) with  --  NFD6
11 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.28398) with  --  TOM6
12 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.931244) with  --  ATWHY2; WHY2
13 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.14326) with  --  RPS10
14 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.9865) with  --  AT3G15460
15 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.04207) with  --  AT3G23620
16 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.00982) with  --  AT3G13230
17 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.995613) with  --  AT3G20240
18 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.927576) with  --  AT3G12370
19 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.39896) with  --  AT4G12600
20 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.12679) with  --  AT4G32605
21 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.07965) with  --  AT4G37660
22 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.873356) with  --  AT3G59840
23 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.03972) with  --  AT5G47455
24 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.875358) with  --  TIM8
25 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.10987) with  --  AT5G56670
26 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=1.0998) with  --  RPS28
27 AT3G25120  --  has similar expression pattern (mutual information value=0.988054) with  --  AT1G28395  --  has similar expression pattern (mutual information value=0.90701) with  --  U1A
28 AT3G25120  --  has similar expression pattern (mutual information value=0.912334) with  --  AT5G20160  --  interacts with  --  AHL29; SOB3
29 AT3G25120  --  has similar expression pattern (mutual information value=0.912334) with  --  AT5G20160  --  has similar expression pattern (mutual information value=0.852665) with  --  AT1G60080
30 AT3G25120  --  has similar expression pattern (mutual information value=0.912334) with  --  AT5G20160  --  has similar expression pattern (mutual information value=1.03779) with  --  EMB2762
31 AT3G25120  --  has similar expression pattern (mutual information value=0.912334) with  --  AT5G20160  --  has similar expression pattern (mutual information value=0.969745) with  --  AT1G02870
32 AT3G25120  --  has similar expression pattern (mutual information value=0.912334) with  --  AT5G20160  --  has similar expression pattern (mutual information value=0.976472) with  --  AT1G67620
33 AT3G25120  --  has similar expression pattern (mutual information value=0.912334) with  --  AT5G20160  --  has similar expression pattern (mutual information value=0.853987) with  --  AT3G02190
34 AT3G25120  --  has similar expression pattern (mutual information value=0.912334) with  --  AT5G20160  --  has similar expression pattern (mutual information value=1.23125) with  --  AT5G60990
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact