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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G53060
Type: Protein GRN ID: np41930 Name:
Annotation: RNA-binding KH domain-containing protein
Gene Locus: AT5G53060
Gene Expression (Affy ATH1 probeset): 248294_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2
3 AT5G53060  --  interacts with  --  AT5G54580
4 AT5G53060  --  interacts with  --  AT1G29120
5 AT5G53060  --  interacts with  --  AT5G05190
6 AT5G53060  --  interacts with  --  AT5G11090
7 AT5G53060  --  interacts with  --  AT2G43370
8 AT5G53060  --  interacts with  --  AtRZ-1c; RZ-1c
9 AT5G53060  --  interacts with  --  MOS1
10 AT5G53060  --  interacts with  --  AT2G39100
11 AT5G53060  --  interacts with  --  AT5G06770
12 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  DRB1
13 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  SE
14 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  ANAC019; NAC019
15 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  ATMYB3; MYB3
16 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  XBAT31
17 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  AT3G54290
18 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  AT4G28760
19 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  AT1G20110
20 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  AT3G26730
21 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  DMS3; IDN1
22 AT5G53060  --  interacts with  --  ATCPL1; CPL1; FRY2  --  interacts with  --  ATCDPK2/CPK11
23 AT5G53060  --  interacts with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.832071) with  --  AT1G28530
24 AT5G53060  --  interacts with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.952409) with  --  AT3G20240
25 AT5G53060  --  interacts with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.926316) with  --  AR192
26 AT5G53060  --  interacts with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.996129) with  --  BIR6
27 AT5G53060  --  interacts with  --  AT5G54580  --  interacts with  --  At-RSZ22a; RSZ22a
28 AT5G53060  --  interacts with  --  AT5G54580  --  interacts with  --  AJH2; CSN5; CSN5B
29 AT5G53060  --  interacts with  --  AT5G54580  --  interacts with  --  AT5G46190
30 AT5G53060  --  interacts with  --  AT5G54580  --  interacts with  --  AT3G21215
31 AT5G53060  --  interacts with  --  AT5G54580  --  interacts with  --  AT2G33550
32 AT5G53060  --  interacts with  --  AT5G54580  --  interacts with  --  AT1G09660
33 AT5G53060  --  interacts with  --  AT5G54580  --  interacts with  --  LSU1
34 AT5G53060  --  interacts with  --  AT1G29120  --  interacts with  --  AT3G01670
35 AT5G53060  --  interacts with  --  AT1G29120  --  interacts with  --  LSU2
36 AT5G53060  --  interacts with  --  AT1G29120  --  interacts with  --  ATEXO70E2; EXO70E2
37 AT5G53060  --  interacts with  --  AT1G29120  --  interacts with  --  AT2G16900
38 AT5G53060  --  interacts with  --  AT1G29120  --  interacts with  --  MEE18
39 AT5G53060  --  interacts with  --  AT5G05190  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1
40 AT5G53060  --  interacts with  --  AT5G05190  --  interacts with  --  AT5G19960
41 AT5G53060  --  interacts with  --  AT5G05190  --  interacts with  --  AT5G06780
42 AT5G53060  --  interacts with  --  AT5G05190  --  interacts with  --  PTF1; TCP13; TFPD
43 AT5G53060  --  interacts with  --  AT5G05190  --  interacts with  --  AT4G15730
44 AT5G53060  --  interacts with  --  AT5G05190  --  interacts with  --  ATMAP70-5; MAP70-5
45 AT5G53060  --  interacts with  --  AT5G05190  --  interacts with  --  ATHSP23.6-MITO; HSP23.6-MITO
46 AT5G53060  --  interacts with  --  AT5G05190  --  interacts with  --  NTRC
47 AT5G53060  --  interacts with  --  AT5G05190  --  interacts with  --  AT2G37150
48 AT5G53060  --  interacts with  --  AT5G05190  --  interacts with  --  AT4G01090
49 AT5G53060  --  interacts with  --  AT5G11090  --  interacts with  --  AT3G27960
50 AT5G53060  --  interacts with  --  AT5G11090  --  interacts with  --  AT4G39050
51 AT5G53060  --  interacts with  --  AT5G11090  --  interacts with  --  OBE1
52 AT5G53060  --  interacts with  --  AT5G11090  --  interacts with  --  AT4G24840
53 AT5G53060  --  interacts with  --  AT5G11090  --  interacts with  --  ATB BETA
54 AT5G53060  --  interacts with  --  AT5G11090  --  interacts with  --  ARR10
55 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  AT5G58720
56 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  BOI; RING
57 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  AT3G50910
58 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  SUA
59 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  AT5G25490
60 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  AT3G11590
61 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  AT5G38600
62 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  AT5G53800
63 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  At-RS40; AT-SRP40; ATRSP35; ATRSP40; RS40; RSP35
64 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30
65 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  At-SC35; ATSC35; SC35
66 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  AT-RS2Z33; ATRSZ33; RS2Z33; RSZ33
67 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  At-RSZ21; RSZ21; RSZP21; SRZ-21; SRZ21
68 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  At-RS31; ATRSP31; RS31; RSP31
69 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  At-SR34; ATSRP34; SR1; SR34; SRP34
70 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  At-SCL30A; SCL30A
71 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  At-SCL30; SCL30
72 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  At-SCL28; SCL28
73 AT5G53060  --  interacts with  --  AT2G43370  --  interacts with  --  AT1G30860
74 AT5G53060  --  interacts with  --  AtRZ-1c; RZ-1c  --  interacts with  --  AtRZ-1b; RZ-1b
75 AT5G53060  --  interacts with  --  AtRZ-1c; RZ-1c  --  interacts with  --  AT2G44710
76 AT5G53060  --  interacts with  --  MOS1  --  interacts with  --  SUF4
77 AT5G53060  --  interacts with  --  MOS1  --  interacts with  --  AT4G28300
78 AT5G53060  --  interacts with  --  MOS1  --  interacts with  --  AtTCP15; TCP15
79 AT5G53060  --  interacts with  --  AT2G39100  --  interacts with  --  AT4G11890
80 AT5G53060  --  interacts with  --  AT2G39100  --  interacts with  --  WOX12
81 AT5G53060  --  interacts with  --  AT2G39100  --  interacts with  --  BP; BP1; KNAT1
82 AT5G53060  --  interacts with  --  AT5G06770  --  interacts with  --  ATPABN1; PABN1
83 AT5G53060  --  interacts with  --  AT5G06770  --  interacts with  --  DCP5
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