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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G19440
Type: Protein GRN ID: np26484 Name:
Annotation: Pseudouridine synthase family protein
Gene Locus: AT3G19440
Gene Expression (Affy ATH1 probeset): 258009_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355
3 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940
4 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6
5 AT3G19440  --  has similar expression pattern (mutual information value=0.905489) with  --  RBL
6 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605
7 AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355  --  has similar expression pattern (mutual information value=0.928208) with  --  AT2G19385
8 AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355  --  has similar expression pattern (mutual information value=1.03398) with  --  AT2G34260
9 AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355  --  has similar expression pattern (mutual information value=0.900443) with  --  AT1G63250
10 AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355  --  has similar expression pattern (mutual information value=0.900443) with  --  AT2G07750
11 AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355  --  has similar expression pattern (mutual information value=0.809184) with  --  AT2G31240
12 AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355  --  has similar expression pattern (mutual information value=1.01933) with  --  AT1G75670
13 AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355  --  has similar expression pattern (mutual information value=0.846391) with  --  AT3G15080
14 AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355  --  has similar expression pattern (mutual information value=0.875213) with  --  ATRH25; STRS2
15 AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355  --  has similar expression pattern (mutual information value=0.822149) with  --  AT5G09840
16 AT3G19440  --  has similar expression pattern (mutual information value=0.846593) with  --  AT2G25355  --  has similar expression pattern (mutual information value=0.869483) with  --  AT5G14600
17 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.994198) with  --  AT2G18330
18 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.10522) with  --  AT1G51380
19 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.986365) with  --  ATRRP4; RRP4
20 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.87672) with  --  AT1G23280
21 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.07877) with  --  MEE67
22 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.07877) with  --  AT1G18320
23 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.982265) with  --  AT1G53645
24 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.14643) with  --  PPR596
25 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.1224) with  --  AAC42; ATRPAC42
26 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.04659) with  --  AT3G03920
27 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.1147) with  --  AtHsp90-6; AtHsp90.6; Hsp89.1
28 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.987182) with  --  AT3G07750
29 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.02883) with  --  AT3G09720
30 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.996365) with  --  APUM24; PUM24
31 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.12) with  --  HSP60-3A
32 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.11128) with  --  ATPHB4; PHB4
33 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.35321) with  --  ATPRMT3; PRMT3
34 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.88678) with  --  AR192
35 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.920035) with  --  EMB2788
36 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.12093) with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
37 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.04337) with  --  ATHD2A; HD2A; HDA3; HDT1
38 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.96808) with  --  NRPA1
39 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.0527) with  --  AT5G02050
40 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.15196) with  --  AT5G11240
41 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=0.810456) with  --  AT5G39840
42 AT3G19440  --  has similar expression pattern (mutual information value=0.834291) with  --  AT4G04940  --  has similar expression pattern (mutual information value=1.00565) with  --  AT5G16930
43 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.906346) with  --  LOJ
44 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.841685) with  --  AT2G27775
45 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.87952) with  --  AT1G61990
46 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.88522) with  --  AT2G37020
47 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.818448) with  --  EMB2217
48 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.882988) with  --  AT1G13030
49 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.830465) with  --  AT1G71840
50 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.910842) with  --  AT3G13940
51 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.848879) with  --  AT3G13150
52 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=1.00937) with  --  AT3G20240
53 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=1.00825) with  --  AT4G20020
54 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.804281) with  --  AT4G38150
55 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.982528) with  --  AT3G63090
56 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.948676) with  --  AT5G05990
57 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.962566) with  --  AT5G42150
58 AT3G19440  --  has similar expression pattern (mutual information value=0.821412) with  --  BIR6  --  has similar expression pattern (mutual information value=0.996129) with  --  AT5G54580
59 AT3G19440  --  has similar expression pattern (mutual information value=0.905489) with  --  RBL  --  has similar expression pattern (mutual information value=0.852477) with  --  EMB2785
60 AT3G19440  --  has similar expression pattern (mutual information value=0.905489) with  --  RBL  --  has similar expression pattern (mutual information value=0.860117) with  --  NRPA2
61 AT3G19440  --  has similar expression pattern (mutual information value=0.905489) with  --  RBL  --  has similar expression pattern (mutual information value=0.856792) with  --  AT3G01800
62 AT3G19440  --  has similar expression pattern (mutual information value=0.905489) with  --  RBL  --  has similar expression pattern (mutual information value=0.804205) with  --  MTSSB
63 AT3G19440  --  has similar expression pattern (mutual information value=0.905489) with  --  RBL  --  has similar expression pattern (mutual information value=0.803565) with  --  GFA2
64 AT3G19440  --  has similar expression pattern (mutual information value=0.905489) with  --  RBL  --  has similar expression pattern (mutual information value=0.932782) with  --  RID2
65 AT3G19440  --  has similar expression pattern (mutual information value=0.905489) with  --  RBL  --  has similar expression pattern (mutual information value=0.942751) with  --  AT4G36580
66 AT3G19440  --  has similar expression pattern (mutual information value=0.905489) with  --  RBL  --  has similar expression pattern (mutual information value=0.817318) with  --  AtmtOM64; ATTOC64-V; MTOM64; OM64; TOC64-V
67 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  interacts with  --  AT5G47590
68 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.933687) with  --  AT2G35605
69 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.98257) with  --  TIM13
70 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.86426) with  --  AT1G04590
71 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.13695) with  --  AT1G70350
72 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.956999) with  --  AT1G15250
73 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.905741) with  --  AT1G18850
74 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.901536) with  --  AT1G17510
75 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.980201) with  --  AT1G52930
76 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.94045) with  --  AT1G36310
77 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.05452) with  --  AT3G05810
78 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.984501) with  --  AT3G09890
79 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.99979) with  --  AT3G02650
80 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.876356) with  --  AT3G25940
81 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.85155) with  --  AT4G11120
82 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.826391) with  --  AT5G01230
83 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.880692) with  --  TIM8
84 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.977842) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
85 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.94797) with  --  AT5G27395
86 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.01086) with  --  AT5G16060
87 AT3G19440  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.958907) with  --  AT2G39795
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