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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G04590
Type: Protein GRN ID: np17338 Name:
Annotation: BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Gene Locus: AT1G04590
Gene Expression (Affy ATH1 probeset): 264615_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G04590  --  has similar expression pattern (mutual information value=0.809497) with  --  AT2G35605
3 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990
4 AT1G04590  --  has similar expression pattern (mutual information value=0.826241) with  --  AT2G20060
5 AT1G04590  --  has similar expression pattern (mutual information value=0.826808) with  --  AT2G28600
6 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030
7 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810
8 AT1G04590  --  has similar expression pattern (mutual information value=0.825352) with  --  AT3G09700
9 AT1G04590  --  has similar expression pattern (mutual information value=0.820422) with  --  AT3G18760
10 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605
11 AT1G04590  --  has similar expression pattern (mutual information value=0.907788) with  --  AT2G39795
12 AT1G04590  --  has similar expression pattern (mutual information value=0.809497) with  --  AT2G35605  --  has similar expression pattern (mutual information value=0.811486) with  --  AT1G23100
13 AT1G04590  --  has similar expression pattern (mutual information value=0.809497) with  --  AT2G35605  --  has similar expression pattern (mutual information value=0.866865) with  --  ATPHB4; PHB4
14 AT1G04590  --  has similar expression pattern (mutual information value=0.809497) with  --  AT2G35605  --  has similar expression pattern (mutual information value=0.834992) with  --  NRPB12; NRPD12; NRPE12
15 AT1G04590  --  has similar expression pattern (mutual information value=0.809497) with  --  AT2G35605  --  has similar expression pattern (mutual information value=0.847443) with  --  AT5G64650
16 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.970917) with  --  AT2G44860
17 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.02165) with  --  AT2G19750
18 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.856248) with  --  AT2G37400
19 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.953513) with  --  TPR3
20 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.912238) with  --  AT1G23280
21 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.03263) with  --  AT1G80750
22 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.11767) with  --  PPR596
23 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.00437) with  --  AT3G05560
24 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.987924) with  --  AT3G06680
25 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.936368) with  --  AT3G13940
26 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.920806) with  --  AT3G25940
27 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.06638) with  --  AT1G07070
28 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.851457) with  --  STRS1
29 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.02491) with  --  AT4G28450
30 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.04396) with  --  AT4G29410
31 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.04773) with  --  AT3G49080
32 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.982585) with  --  ROC2
33 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.24519) with  --  AT3G57490
34 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.03098) with  --  AT3G58700
35 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.00523) with  --  AT5G14050
36 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=1.09825) with  --  TIM8
37 AT1G04590  --  has similar expression pattern (mutual information value=0.830549) with  --  AT2G37990  --  has similar expression pattern (mutual information value=0.868014) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
38 AT1G04590  --  has similar expression pattern (mutual information value=0.826241) with  --  AT2G20060  --  interacts with  --  AT3G50910
39 AT1G04590  --  has similar expression pattern (mutual information value=0.826241) with  --  AT2G20060  --  has similar expression pattern (mutual information value=0.828646) with  --  AT2G05140
40 AT1G04590  --  has similar expression pattern (mutual information value=0.826241) with  --  AT2G20060  --  has similar expression pattern (mutual information value=0.828646) with  --  AT2G37690
41 AT1G04590  --  has similar expression pattern (mutual information value=0.826241) with  --  AT2G20060  --  has similar expression pattern (mutual information value=0.977832) with  --  DECOY
42 AT1G04590  --  has similar expression pattern (mutual information value=0.826241) with  --  AT2G20060  --  has similar expression pattern (mutual information value=1.11772) with  --  AT4G35850
43 AT1G04590  --  has similar expression pattern (mutual information value=0.826241) with  --  AT2G20060  --  has similar expression pattern (mutual information value=0.829375) with  --  AT5G06550
44 AT1G04590  --  has similar expression pattern (mutual information value=0.826241) with  --  AT2G20060  --  has similar expression pattern (mutual information value=0.805126) with  --  AT5G27395
45 AT1G04590  --  has similar expression pattern (mutual information value=0.826808) with  --  AT2G28600  --  has similar expression pattern (mutual information value=0.968747) with  --  AT2G18330
46 AT1G04590  --  has similar expression pattern (mutual information value=0.826808) with  --  AT2G28600  --  has similar expression pattern (mutual information value=0.850259) with  --  AT1G73180
47 AT1G04590  --  has similar expression pattern (mutual information value=0.826808) with  --  AT2G28600  --  has similar expression pattern (mutual information value=1.00899) with  --  AT1G77550
48 AT1G04590  --  has similar expression pattern (mutual information value=0.826808) with  --  AT2G28600  --  has similar expression pattern (mutual information value=0.869281) with  --  YAO
49 AT1G04590  --  has similar expression pattern (mutual information value=0.826808) with  --  AT2G28600  --  has similar expression pattern (mutual information value=0.811682) with  --  ATEIF3G2; EIF3G2
50 AT1G04590  --  has similar expression pattern (mutual information value=0.826808) with  --  AT2G28600  --  has similar expression pattern (mutual information value=0.899816) with  --  EIF(ISO)4E; EIF4E2; eIFiso4E; LSP; LSP1
51 AT1G04590  --  has similar expression pattern (mutual information value=0.826808) with  --  AT2G28600  --  has similar expression pattern (mutual information value=0.890629) with  --  AT5G65860
52 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  interacts with  --  ATG8B
53 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  interacts with  --  OPR3
54 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  interacts with  --  ARR5
55 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.898218) with  --  AT2G37020
56 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.821737) with  --  EMB2217
57 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  has similar expression pattern (mutual information value=1.09242) with  --  AT1G71840
58 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.938743) with  --  EMB1860; TIM50
59 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.882988) with  --  BIR6
60 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.995702) with  --  RRP41
61 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.949818) with  --  AT3G63090
62 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.833618) with  --  AT5G05990
63 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  has similar expression pattern (mutual information value=0.87292) with  --  AT5G64680
64 AT1G04590  --  has similar expression pattern (mutual information value=0.827417) with  --  AT1G13030  --  has similar expression pattern (mutual information value=1.14217) with  --  AT5G15750
65 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810  --  has similar expression pattern (mutual information value=0.830216) with  --  ROL5
66 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810  --  has similar expression pattern (mutual information value=0.832937) with  --  AT2G47790
67 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810  --  has similar expression pattern (mutual information value=0.989317) with  --  ATRRP4; RRP4
68 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810  --  has similar expression pattern (mutual information value=0.940031) with  --  AT1G14300
69 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810  --  has similar expression pattern (mutual information value=0.861602) with  --  AT3G07590
70 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810  --  has similar expression pattern (mutual information value=0.848378) with  --  AT1G07210
71 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810  --  has similar expression pattern (mutual information value=0.977681) with  --  AT3G57000
72 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810  --  has similar expression pattern (mutual information value=0.833199) with  --  AT5G44710
73 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810  --  has similar expression pattern (mutual information value=0.934709) with  --  AT5G59460
74 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810  --  has similar expression pattern (mutual information value=0.853282) with  --  AT5G61880
75 AT1G04590  --  has similar expression pattern (mutual information value=0.809211) with  --  AT3G05810  --  has similar expression pattern (mutual information value=1.05467) with  --  AT5G16060
76 AT1G04590  --  has similar expression pattern (mutual information value=0.825352) with  --  AT3G09700  --  interacts with  --  AtMYB51; BW51A; BW51B; HIG1; MYB51
77 AT1G04590  --  has similar expression pattern (mutual information value=0.825352) with  --  AT3G09700  --  has similar expression pattern (mutual information value=0.810076) with  --  AT1G63250
78 AT1G04590  --  has similar expression pattern (mutual information value=0.825352) with  --  AT3G09700  --  has similar expression pattern (mutual information value=0.810076) with  --  AT2G07750
79 AT1G04590  --  has similar expression pattern (mutual information value=0.825352) with  --  AT3G09700  --  has similar expression pattern (mutual information value=1.01865) with  --  AT1G70350
80 AT1G04590  --  has similar expression pattern (mutual information value=0.825352) with  --  AT3G09700  --  has similar expression pattern (mutual information value=0.962035) with  --  AT5G18790
81 AT1G04590  --  has similar expression pattern (mutual information value=0.825352) with  --  AT3G09700  --  has similar expression pattern (mutual information value=0.962035) with  --  AT3G06320
82 AT1G04590  --  has similar expression pattern (mutual information value=0.825352) with  --  AT3G09700  --  has similar expression pattern (mutual information value=0.8727) with  --  AT5G42150
83 AT1G04590  --  has similar expression pattern (mutual information value=0.825352) with  --  AT3G09700  --  has similar expression pattern (mutual information value=0.845457) with  --  AT5G61220
84 AT1G04590  --  has similar expression pattern (mutual information value=0.825352) with  --  AT3G09700  --  transport  --  Polypeptide
85 AT1G04590  --  has similar expression pattern (mutual information value=0.825352) with  --  AT3G09700  --  transport  --  Heme
86 AT1G04590  --  has similar expression pattern (mutual information value=0.820422) with  --  AT3G18760  --  has similar expression pattern (mutual information value=1.01154) with  --  AT2G27775
87 AT1G04590  --  has similar expression pattern (mutual information value=0.820422) with  --  AT3G18760  --  has similar expression pattern (mutual information value=0.869843) with  --  TIM10
88 AT1G04590  --  has similar expression pattern (mutual information value=0.820422) with  --  AT3G18760  --  has similar expression pattern (mutual information value=1.05508) with  --  NFD6
89 AT1G04590  --  has similar expression pattern (mutual information value=0.820422) with  --  AT3G18760  --  has similar expression pattern (mutual information value=1.04303) with  --  TOM6
90 AT1G04590  --  has similar expression pattern (mutual information value=0.820422) with  --  AT3G18760  --  has similar expression pattern (mutual information value=0.880629) with  --  AT1G80720
91 AT1G04590  --  has similar expression pattern (mutual information value=0.820422) with  --  AT3G18760  --  has similar expression pattern (mutual information value=1.06225) with  --  AT1G26740
92 AT1G04590  --  has similar expression pattern (mutual information value=0.820422) with  --  AT3G18760  --  has similar expression pattern (mutual information value=0.877382) with  --  AT1G26750
93 AT1G04590  --  has similar expression pattern (mutual information value=0.820422) with  --  AT3G18760  --  has similar expression pattern (mutual information value=0.956185) with  --  AT1G29250
94 AT1G04590  --  has similar expression pattern (mutual information value=0.820422) with  --  AT3G18760  --  has similar expression pattern (mutual information value=0.913445) with  --  AT4G29390
95 AT1G04590  --  has similar expression pattern (mutual information value=0.820422) with  --  AT3G18760  --  has similar expression pattern (mutual information value=0.839267) with  --  AT5G11340
96 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  interacts with  --  AT5G47590
97 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.06889) with  --  AT2G25355
98 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.04833) with  --  AT1G51380
99 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.98257) with  --  TIM13
100 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.956999) with  --  AT1G15250
101 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.03252) with  --  MEE67
102 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.03252) with  --  AT1G18320
103 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.905741) with  --  AT1G18850
104 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.901536) with  --  AT1G17510
105 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.980201) with  --  AT1G52930
106 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.94045) with  --  AT1G36310
107 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.06093) with  --  AAC42; ATRPAC42
108 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.948669) with  --  AT3G03920
109 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.07538) with  --  AT3G07750
110 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.984501) with  --  AT3G09890
111 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.99979) with  --  AT3G02650
112 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.800866) with  --  AT3G19440
113 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=1.09254) with  --  AT4G04940
114 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.85155) with  --  AT4G11120
115 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.972321) with  --  AT3G46210
116 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.826391) with  --  AT5G01230
117 AT1G04590  --  has similar expression pattern (mutual information value=0.86426) with  --  AT3G55605  --  has similar expression pattern (mutual information value=0.841523) with  --  AT5G39840
118 AT1G04590  --  has similar expression pattern (mutual information value=0.907788) with  --  AT2G39795  --  has similar expression pattern (mutual information value=1.02439) with  --  ATRBP45A; RBP45A
119 AT1G04590  --  has similar expression pattern (mutual information value=0.907788) with  --  AT2G39795  --  has similar expression pattern (mutual information value=0.907906) with  --  ATEBP1; ATG2; EBP1
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