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Location:  Home > Details for node CDC48B
Type: Protein GRN ID: np20644 Name: CDC48B
Annotation: CDC48B | cell division cycle 48B [TCDB:9.A.34.1] [TCDB:9.A.34.2]
Gene Locus: AT2G03670
Gene Expression (Affy ATH1 probeset): 264027_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 CDC48B  --  interacts with  --  GUT15
3 CDC48B  --  interacts with  --  AT2G18860
4 CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2
5 CDC48B  --  interacts with  --  ATG8F
6 CDC48B  --  interacts with  --  EMB3137
7 CDC48B  --  has similar expression pattern (mutual information value=0.823823) with  --  AT2G01640
8 CDC48B  --  has similar expression pattern (mutual information value=0.869481) with  --  AT3G63090
9 CDC48B  --  has similar expression pattern (mutual information value=0.912596) with  --  AT5G12220
10 CDC48B  --  has similar expression pattern (mutual information value=0.891327) with  --  AT5G18770
11 CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2  --  interacts with  --  ATFIM1; FIM1
12 CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2  --  interacts with  --  CHY1
13 CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2  --  interacts with  --  ADF3
14 CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2  --  interacts with  --  ACT12
15 CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2  --  interacts with  --  AT3G18060
16 CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2  --  interacts with  --  AT4G37130
17 CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2  --  interacts with  --  SNRK2-10; SNRK2.10; SRK2B
18 CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2  --  interacts with  --  AAc1; ACT1
19 CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2  --  has similar expression pattern (mutual information value=0.915209) with  --  AT1G12080
20 CDC48B  --  interacts with  --  ACT2; DER1; ENL2; FIZ2; LSR2  --  has similar expression pattern (mutual information value=0.800354) with  --  AT3G51330
21 CDC48B  --  interacts with  --  ATG8F  --  interacts with  --  AT4G34660
22 CDC48B  --  interacts with  --  ATG8F  --  interacts with  --  AtNBR1; NBR1
23 CDC48B  --  interacts with  --  ATG8F  --  interacts with  --  AT5G40690
24 CDC48B  --  interacts with  --  ATG8F  --  interacts with  --  AT5G07730
25 CDC48B  --  interacts with  --  ATG8F  --  interacts with  --  AT4G00355
26 CDC48B  --  interacts with  --  ATG8F  --  interacts with  --  APG7; ATAPG7; ATATG7; ATG7
27 CDC48B  --  interacts with  --  ATG8F  --  interacts with  --  ATATG3; ATG3
28 CDC48B  --  interacts with  --  ATG8F  --  interacts with  --  AT2G35900
29 CDC48B  --  interacts with  --  ATG8F  --  interacts with  --  AT2G46550
30 CDC48B  --  interacts with  --  ATG8F  --  interacts with  --  AT4G15930
31 CDC48B  --  interacts with  --  ATG8F  --  has similar expression pattern (mutual information value=0.828325) with  --  ARP8; ARP8; ATARP8
32 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.49273) with  --  PSRP4
33 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.53001) with  --  emb2394
34 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.58649) with  --  LPA3
35 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.5303) with  --  RPS9; TWN3
36 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.5496) with  --  AT1G35680
37 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.5136) with  --  AT1G64510
38 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.374) with  --  emb2184
39 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.42308) with  --  EMB2784; RPL4
40 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.51118) with  --  AT1G29070
41 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.17032) with  --  AT3G08920
42 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.51385) with  --  RPL15
43 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.1707) with  --  AT3G25805
44 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.41722) with  --  RPL12; RPL12-A
45 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.41722) with  --  RPL12-C
46 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.58105) with  --  AT3G15190
47 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.52304) with  --  AT2G33450
48 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.51227) with  --  AT4G02530
49 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.37055) with  --  ATRBP31; ATRBP33; CP31; RBP31
50 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.08373) with  --  AT4G25370
51 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.62024) with  --  AT3G54210
52 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.4266) with  --  AT5G51110
53 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.69098) with  --  AT5G54600
54 CDC48B  --  interacts with  --  EMB3137  --  has similar expression pattern (mutual information value=1.37456) with  --  AT5G14910
55 CDC48B  --  has similar expression pattern (mutual information value=0.823823) with  --  AT2G01640  --  has similar expression pattern (mutual information value=0.883658) with  --  AT1G15420
56 CDC48B  --  has similar expression pattern (mutual information value=0.869481) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.840559) with  --  EMB2217
57 CDC48B  --  has similar expression pattern (mutual information value=0.869481) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.949818) with  --  AT1G13030
58 CDC48B  --  has similar expression pattern (mutual information value=0.869481) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.847962) with  --  AT1G71430
59 CDC48B  --  has similar expression pattern (mutual information value=0.869481) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.903961) with  --  AT4G20020
60 CDC48B  --  has similar expression pattern (mutual information value=0.869481) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.85795) with  --  AT4G38150
61 CDC48B  --  has similar expression pattern (mutual information value=0.869481) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.982528) with  --  BIR6
62 CDC48B  --  has similar expression pattern (mutual information value=0.869481) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.887963) with  --  RRP41
63 CDC48B  --  has similar expression pattern (mutual information value=0.869481) with  --  AT3G63090  --  has similar expression pattern (mutual information value=0.917937) with  --  AT5G15750
64 CDC48B  --  has similar expression pattern (mutual information value=0.912596) with  --  AT5G12220  --  has similar expression pattern (mutual information value=0.886138) with  --  AT3G13150
65 CDC48B  --  has similar expression pattern (mutual information value=0.912596) with  --  AT5G12220  --  has similar expression pattern (mutual information value=0.860853) with  --  AT3G61100
66 CDC48B  --  has similar expression pattern (mutual information value=0.912596) with  --  AT5G12220  --  has similar expression pattern (mutual information value=0.842822) with  --  AT5G13830
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