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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G28530
Type: Protein GRN ID: np17217 Name:
Annotation: unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; Has 20 Blast hits to 20 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT1G28530
Gene Expression (Affy ATH1 probeset): 262738_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G28530  --  has similar expression pattern (mutual information value=0.805871) with  --  ATDEF1; PDF1A
3 AT1G28530  --  has similar expression pattern (mutual information value=0.84413) with  --  AT1G48570
4 AT1G28530  --  has similar expression pattern (mutual information value=0.805126) with  --  AT1G71460
5 AT1G28530  --  has similar expression pattern (mutual information value=0.803856) with  --  AT4G31210
6 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580
7 AT1G28530  --  has similar expression pattern (mutual information value=0.805871) with  --  ATDEF1; PDF1A  --  has similar expression pattern (mutual information value=0.810054) with  --  AT5G41970
8 AT1G28530  --  has similar expression pattern (mutual information value=0.805871) with  --  ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Methionyl peptide
9 AT1G28530  --  has similar expression pattern (mutual information value=0.805871) with  --  ATDEF1; PDF1A  --  has product (in catalytic reaction)  --  Formate
10 AT1G28530  --  has similar expression pattern (mutual information value=0.84413) with  --  AT1G48570  --  has similar expression pattern (mutual information value=0.899367) with  --  EMB2001
11 AT1G28530  --  has similar expression pattern (mutual information value=0.84413) with  --  AT1G48570  --  has similar expression pattern (mutual information value=0.991737) with  --  EMB3108
12 AT1G28530  --  has similar expression pattern (mutual information value=0.84413) with  --  AT1G48570  --  has similar expression pattern (mutual information value=0.976074) with  --  PDE340
13 AT1G28530  --  has similar expression pattern (mutual information value=0.84413) with  --  AT1G48570  --  has similar expression pattern (mutual information value=0.814121) with  --  DegP10
14 AT1G28530  --  has similar expression pattern (mutual information value=0.805126) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.860066) with  --  AT1G09740
15 AT1G28530  --  has similar expression pattern (mutual information value=0.805126) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.860939) with  --  CPZ; TRZ2
16 AT1G28530  --  has similar expression pattern (mutual information value=0.805126) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.817194) with  --  MRL7-L
17 AT1G28530  --  has similar expression pattern (mutual information value=0.805126) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.823813) with  --  AT1G48460
18 AT1G28530  --  has similar expression pattern (mutual information value=0.805126) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.802223) with  --  AT4G27340
19 AT1G28530  --  has similar expression pattern (mutual information value=0.805126) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.955811) with  --  AT5G39980
20 AT1G28530  --  has similar expression pattern (mutual information value=0.805126) with  --  AT1G71460  --  has similar expression pattern (mutual information value=1.15552) with  --  AT5G08400
21 AT1G28530  --  has similar expression pattern (mutual information value=0.803856) with  --  AT4G31210  --  has similar expression pattern (mutual information value=0.896195) with  --  AT3G21300
22 AT1G28530  --  has similar expression pattern (mutual information value=0.803856) with  --  AT4G31210  --  has similar expression pattern (mutual information value=0.963416) with  --  AT1G72040
23 AT1G28530  --  has similar expression pattern (mutual information value=0.803856) with  --  AT4G31210  --  has similar expression pattern (mutual information value=0.82156) with  --  AT5G05990
24 AT1G28530  --  has similar expression pattern (mutual information value=0.803856) with  --  AT4G31210  --  transport  --  Nickel(2+)
25 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.952409) with  --  AT3G20240
26 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.926316) with  --  AR192
27 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.996129) with  --  BIR6
28 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580  --  interacts with  --  AT5G53060
29 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580  --  interacts with  --  At-RSZ22a; RSZ22a
30 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580  --  interacts with  --  AJH2; CSN5; CSN5B
31 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580  --  interacts with  --  AT5G46190
32 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580  --  interacts with  --  AT3G21215
33 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580  --  interacts with  --  AT2G33550
34 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580  --  interacts with  --  AT1G09660
35 AT1G28530  --  has similar expression pattern (mutual information value=0.832071) with  --  AT5G54580  --  interacts with  --  LSU1
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