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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G46190
Type: Protein GRN ID: np38447 Name:
Annotation: RNA-binding KH domain-containing protein
Gene Locus: AT5G46190
Gene Expression (Affy ATH1 probeset): 248883_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G46190  --  interacts with  --  AT5G54580
3 AT5G46190  --  interacts with  --  AT3G21215
4 AT5G46190  --  interacts with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.832071) with  --  AT1G28530
5 AT5G46190  --  interacts with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.952409) with  --  AT3G20240
6 AT5G46190  --  interacts with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.926316) with  --  AR192
7 AT5G46190  --  interacts with  --  AT5G54580  --  has similar expression pattern (mutual information value=0.996129) with  --  BIR6
8 AT5G46190  --  interacts with  --  AT5G54580  --  interacts with  --  AT5G53060
9 AT5G46190  --  interacts with  --  AT5G54580  --  interacts with  --  At-RSZ22a; RSZ22a
10 AT5G46190  --  interacts with  --  AT5G54580  --  interacts with  --  AJH2; CSN5; CSN5B
11 AT5G46190  --  interacts with  --  AT5G54580  --  interacts with  --  AT2G33550
12 AT5G46190  --  interacts with  --  AT5G54580  --  interacts with  --  AT1G09660
13 AT5G46190  --  interacts with  --  AT5G54580  --  interacts with  --  LSU1
14 AT5G46190  --  interacts with  --  AT3G21215  --  interacts with  --  ATGRP2; GR-RBP2; GRP2
15 AT5G46190  --  interacts with  --  AT3G21215  --  interacts with  --  AT4G03120
16 AT5G46190  --  interacts with  --  AT3G21215  --  interacts with  --  AT4G01090
17 AT5G46190  --  interacts with  --  AT3G21215  --  interacts with  --  AT3G22440
18 AT5G46190  --  interacts with  --  AT3G21215  --  interacts with  --  AtDRM3; DRM3
19 AT5G46190  --  interacts with  --  AT3G21215  --  interacts with  --  AT1G03457
20 AT5G46190  --  interacts with  --  AT3G21215  --  interacts with  --  AT2G33410
21 AT5G46190  --  interacts with  --  AT3G21215  --  interacts with  --  AT2G38610
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