Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT1G04945
Type: Protein GRN ID: np18364 Name:
Annotation: HIT-type Zinc finger family protein [TCDB:2.A.85.4]
Gene Locus: AT1G04945
Gene Expression (Affy ATH1 probeset): 261168_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT1G04945  --  has similar expression pattern (mutual information value=0.917725) with  --  AT2G20940
3 AT1G04945  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G22970
4 AT1G04945  --  has similar expression pattern (mutual information value=1.03142) with  --  AT1G14300
5 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42
6 AT1G04945  --  has similar expression pattern (mutual information value=0.83929) with  --  AT1G13810
7 AT1G04945  --  has similar expression pattern (mutual information value=0.806597) with  --  AT1G06380
8 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750
9 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940
10 AT1G04945  --  has similar expression pattern (mutual information value=0.857347) with  --  AT4G27380
11 AT1G04945  --  has similar expression pattern (mutual information value=0.820719) with  --  AT4G28450
12 AT1G04945  --  has similar expression pattern (mutual information value=0.838065) with  --  AT5G14105
13 AT1G04945  --  has similar expression pattern (mutual information value=0.834642) with  --  NRPB12; NRPD12; NRPE12
14 AT1G04945  --  has similar expression pattern (mutual information value=0.938188) with  --  AT5G64680
15 AT1G04945  --  has similar expression pattern (mutual information value=0.917725) with  --  AT2G20940  --  has similar expression pattern (mutual information value=0.824564) with  --  AT1G70350
16 AT1G04945  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G22970  --  interacts with  --  NDL1
17 AT1G04945  --  has similar expression pattern (mutual information value=0.864441) with  --  AT1G22970  --  has similar expression pattern (mutual information value=0.817817) with  --  AT3G56510
18 AT1G04945  --  has similar expression pattern (mutual information value=1.03142) with  --  AT1G14300  --  has similar expression pattern (mutual information value=0.857537) with  --  ROL5
19 AT1G04945  --  has similar expression pattern (mutual information value=1.03142) with  --  AT1G14300  --  has similar expression pattern (mutual information value=0.940031) with  --  AT3G05810
20 AT1G04945  --  has similar expression pattern (mutual information value=1.03142) with  --  AT1G14300  --  has similar expression pattern (mutual information value=0.903571) with  --  RPL3P
21 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  interacts with  --  CERK1; LYSM RLK1
22 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.15489) with  --  AT2G19385
23 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.11735) with  --  AT2G34260
24 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.896088) with  --  AT1G63250
25 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.896088) with  --  AT2G07750
26 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.927653) with  --  OWL1
27 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.833735) with  --  ATHB54; HB54
28 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.06745) with  --  ATRRP4; RRP4
29 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.97378) with  --  AT1G23280
30 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.986862) with  --  AT1G14060
31 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.14876) with  --  MEE67
32 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.14876) with  --  AT1G18320
33 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.917212) with  --  AT1G06720
34 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.91287) with  --  AT3G01160
35 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.883673) with  --  AT3G01800
36 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.06518) with  --  AT3G10530
37 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.854645) with  --  TPR10
38 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.02089) with  --  AT3G15080
39 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.04903) with  --  ATPRMT3; PRMT3
40 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.867627) with  --  AT1G16740
41 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.04556) with  --  AT4G01990
42 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.1224) with  --  AT4G04940
43 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.866615) with  --  AT4G31790
44 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.06093) with  --  AT3G55605
45 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.35997) with  --  AT3G57000
46 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.932182) with  --  NRPA1
47 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.02232) with  --  AT5G09840
48 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.23679) with  --  AT5G38720
49 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.831492) with  --  AT5G39840
50 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.804921) with  --  AT5G48240
51 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=1.03154) with  --  RID2
52 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.873578) with  --  AT5G66540
53 AT1G04945  --  has similar expression pattern (mutual information value=0.889835) with  --  AAC42; ATRPAC42  --  has similar expression pattern (mutual information value=0.826464) with  --  CYCH;1
54 AT1G04945  --  has similar expression pattern (mutual information value=0.83929) with  --  AT1G13810  --  has similar expression pattern (mutual information value=0.913499) with  --  AT1G20300
55 AT1G04945  --  has similar expression pattern (mutual information value=0.806597) with  --  AT1G06380  --  has similar expression pattern (mutual information value=0.860113) with  --  AT1G36310
56 AT1G04945  --  has similar expression pattern (mutual information value=0.806597) with  --  AT1G06380  --  has similar expression pattern (mutual information value=0.901513) with  --  AT4G02820
57 AT1G04945  --  has similar expression pattern (mutual information value=0.806597) with  --  AT1G06380  --  has similar expression pattern (mutual information value=0.905517) with  --  ARP7; ARP7; ATARP7
58 AT1G04945  --  has similar expression pattern (mutual information value=0.806597) with  --  AT1G06380  --  has similar expression pattern (mutual information value=0.875017) with  --  AT5G16060
59 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  interacts with  --  RRP41
60 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.837313) with  --  OSB4
61 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.816742) with  --  EMB2217
62 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.907602) with  --  AT1G06560
63 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.937251) with  --  AT1G15480
64 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.998071) with  --  AtELP2; ELP2
65 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.904594) with  --  AT1G18850
66 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.09509) with  --  NRPA2
67 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.965848) with  --  AtTRM11; TRM11
68 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=1.11489) with  --  AT3G46210
69 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT3G53342
70 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT3G53630
71 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT4G18692
72 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808808) with  --  AT1G55710
73 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.903231) with  --  RBL
74 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.930196) with  --  AT5G22840
75 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.813994) with  --  GFA2
76 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.89114) with  --  AT5G62290
77 AT1G04945  --  has similar expression pattern (mutual information value=0.893545) with  --  AT3G07750  --  has similar expression pattern (mutual information value=0.808125) with  --  AtmtOM64; ATTOC64-V; MTOM64; OM64; TOC64-V
78 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  interacts with  --  AT3G21490
79 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  interacts with  --  AT3G15420
80 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  interacts with  --  AT1G79070
81 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.865246) with  --  AT2G37400
82 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.912198) with  --  AT2G31240
83 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.88671) with  --  AT1G13030
84 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=1.02454) with  --  EMB1860; TIM50
85 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.893942) with  --  PPR596
86 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.952132) with  --  AT4G20020
87 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.963131) with  --  AR192
88 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.906928) with  --  ATPRMT11; ATPRMT1B; PRMT11; PRMT1B
89 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.910842) with  --  BIR6
90 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.84891) with  --  ATRH25; STRS2
91 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.917642) with  --  ATFBR1; ATFIB1; FBR1; FIB1; SKIP7
92 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.803702) with  --  AT5G61220
93 AT1G04945  --  has similar expression pattern (mutual information value=0.829907) with  --  AT3G13940  --  has similar expression pattern (mutual information value=0.839937) with  --  AT1G30240
94 AT1G04945  --  has similar expression pattern (mutual information value=0.857347) with  --  AT4G27380  --  has similar expression pattern (mutual information value=0.926161) with  --  AT1G02870
95 AT1G04945  --  has similar expression pattern (mutual information value=0.857347) with  --  AT4G27380  --  has similar expression pattern (mutual information value=0.808519) with  --  AT1G07830
96 AT1G04945  --  has similar expression pattern (mutual information value=0.857347) with  --  AT4G27380  --  has similar expression pattern (mutual information value=0.836484) with  --  AT1G22270
97 AT1G04945  --  has similar expression pattern (mutual information value=0.857347) with  --  AT4G27380  --  has similar expression pattern (mutual information value=0.957218) with  --  AT3G51010
98 AT1G04945  --  has similar expression pattern (mutual information value=0.820719) with  --  AT4G28450  --  interacts with  --  DDB1A
99 AT1G04945  --  has similar expression pattern (mutual information value=0.820719) with  --  AT4G28450  --  has similar expression pattern (mutual information value=1.08093) with  --  AT2G05140
100 AT1G04945  --  has similar expression pattern (mutual information value=0.820719) with  --  AT4G28450  --  has similar expression pattern (mutual information value=1.08093) with  --  AT2G37690
101 AT1G04945  --  has similar expression pattern (mutual information value=0.820719) with  --  AT4G28450  --  has similar expression pattern (mutual information value=0.844642) with  --  AT2G20060
102 AT1G04945  --  has similar expression pattern (mutual information value=0.820719) with  --  AT4G28450  --  has similar expression pattern (mutual information value=0.91806) with  --  AT1G80720
103 AT1G04945  --  has similar expression pattern (mutual information value=0.820719) with  --  AT4G28450  --  has similar expression pattern (mutual information value=0.889959) with  --  ROC2
104 AT1G04945  --  has similar expression pattern (mutual information value=0.820719) with  --  AT4G28450  --  has similar expression pattern (mutual information value=1.12762) with  --  AT5G02050
105 AT1G04945  --  has similar expression pattern (mutual information value=0.820719) with  --  AT4G28450  --  has similar expression pattern (mutual information value=1.06035) with  --  AT5G06550
106 AT1G04945  --  has similar expression pattern (mutual information value=0.834642) with  --  NRPB12; NRPD12; NRPE12  --  has similar expression pattern (mutual information value=0.834992) with  --  AT2G35605
107 AT1G04945  --  has similar expression pattern (mutual information value=0.834642) with  --  NRPB12; NRPD12; NRPE12  --  has similar expression pattern (mutual information value=1.06402) with  --  AT3G09700
108 AT1G04945  --  has similar expression pattern (mutual information value=0.834642) with  --  NRPB12; NRPD12; NRPE12  --  has similar expression pattern (mutual information value=0.805787) with  --  AT5G42150
109 AT1G04945  --  has similar expression pattern (mutual information value=0.938188) with  --  AT5G64680  --  has similar expression pattern (mutual information value=0.827587) with  --  AT1G75670
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact