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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G02060
Type: Protein GRN ID: np28853 Name:
Annotation: DEAD/DEAH box helicase, putative
Gene Locus: AT3G02060
Gene Expression (Affy ATH1 probeset): 258861_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP
3 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670
4 AT3G02060  --  has similar expression pattern (mutual information value=0.966667) with  --  AT3G02450
5 AT3G02060  --  has similar expression pattern (mutual information value=0.999347) with  --  AT3G18680
6 AT3G02060  --  has similar expression pattern (mutual information value=0.832886) with  --  emb2738
7 AT3G02060  --  has similar expression pattern (mutual information value=0.981601) with  --  FLN1
8 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580
9 AT3G02060  --  has similar expression pattern (mutual information value=0.880288) with  --  EMB2247
10 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=1.17412) with  --  AT2G32650
11 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=1.17412) with  --  PTAC18
12 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=1.12058) with  --  HMR; PTAC12
13 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=0.979059) with  --  AT1G10522
14 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=0.919698) with  --  AT3G10350
15 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=1.04236) with  --  PDE324; PTAC3
16 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=0.970164) with  --  TRX P; TRX z
17 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=0.932168) with  --  TRZ4
18 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=1.05355) with  --  EMB2083
19 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=1.01474) with  --  AT3G13180
20 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=1.0397) with  --  EMB2369
21 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=0.949201) with  --  AT4G23940
22 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=0.963381) with  --  AT4G38020
23 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=0.937963) with  --  ATPPR5; EMB2453
24 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=0.938545) with  --  ATNOA1; ATNOS1; NOA1; NOS1; RIF1
25 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=0.907915) with  --  PDE312; PTAC10
26 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=1.19858) with  --  ATOBGC; ATOBGL; CPSAR1; EMB269; EMB3138
27 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=1.05972) with  --  FSD3
28 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=0.891397) with  --  AtPLR1; PLR1
29 AT3G02060  --  has similar expression pattern (mutual information value=0.84958) with  --  ATRAP; RAP  --  has similar expression pattern (mutual information value=0.95716) with  --  EMB3144
30 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  interacts with  --  PRA1.F3; PRA8
31 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  interacts with  --  AT1G14340
32 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.07406) with  --  AT1G60230
33 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.9282) with  --  ABCD2
34 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.18114) with  --  PTAC6
35 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.05307) with  --  AT1G49380
36 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.845001) with  --  AT1G53120
37 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.934597) with  --  ATDFC; DFC; FPGS2
38 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.00737) with  --  ATAB2
39 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.941022) with  --  AT3G28460
40 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.90796) with  --  ATKRS-2; OVA5
41 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.09495) with  --  AT3G20930
42 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.877614) with  --  AT3G22150
43 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.856504) with  --  ATSS4; SS4; SSIV
44 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.871136) with  --  PTAC14
45 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.845926) with  --  AT4G24090
46 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.17426) with  --  AT4G26370
47 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.02996) with  --  NARA5
48 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.969207) with  --  AT3G43540
49 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.30015) with  --  AT5G02710
50 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.832345) with  --  AT5G03900
51 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.886275) with  --  SVR3
52 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.942546) with  --  AT5G14460
53 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.917944) with  --  EMB139; EMB506
54 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.916618) with  --  scpl42
55 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.02599) with  --  EMB1006
56 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=1.13194) with  --  LPA2
57 AT3G02060  --  has similar expression pattern (mutual information value=0.916358) with  --  AT3G07670  --  has similar expression pattern (mutual information value=0.913764) with  --  CRR21
58 AT3G02060  --  has similar expression pattern (mutual information value=0.966667) with  --  AT3G02450  --  has similar expression pattern (mutual information value=1.13064) with  --  AT1G01970
59 AT3G02060  --  has similar expression pattern (mutual information value=0.966667) with  --  AT3G02450  --  has similar expression pattern (mutual information value=0.97206) with  --  AT3G29185
60 AT3G02060  --  has similar expression pattern (mutual information value=0.966667) with  --  AT3G02450  --  has similar expression pattern (mutual information value=0.81092) with  --  AT3G13740
61 AT3G02060  --  has similar expression pattern (mutual information value=0.966667) with  --  AT3G02450  --  has similar expression pattern (mutual information value=1.07691) with  --  PAM68
62 AT3G02060  --  has similar expression pattern (mutual information value=0.966667) with  --  AT3G02450  --  has similar expression pattern (mutual information value=1.06274) with  --  PGR3
63 AT3G02060  --  has similar expression pattern (mutual information value=0.966667) with  --  AT3G02450  --  has similar expression pattern (mutual information value=0.931643) with  --  AT3G60370
64 AT3G02060  --  has similar expression pattern (mutual information value=0.966667) with  --  AT3G02450  --  has similar expression pattern (mutual information value=0.977928) with  --  SVR7
65 AT3G02060  --  has similar expression pattern (mutual information value=0.966667) with  --  AT3G02450  --  is the target gene of  --  ath-miR2937
66 AT3G02060  --  has similar expression pattern (mutual information value=0.999347) with  --  AT3G18680  --  interacts with  --  CIPK22; SnRK3.19
67 AT3G02060  --  has similar expression pattern (mutual information value=0.999347) with  --  AT3G18680  --  has similar expression pattern (mutual information value=0.879742) with  --  scpl26
68 AT3G02060  --  has similar expression pattern (mutual information value=0.999347) with  --  AT3G18680  --  has similar expression pattern (mutual information value=0.810636) with  --  AT3G14330
69 AT3G02060  --  has similar expression pattern (mutual information value=0.999347) with  --  AT3G18680  --  has similar expression pattern (mutual information value=1.40169) with  --  AT3G19810
70 AT3G02060  --  has similar expression pattern (mutual information value=0.999347) with  --  AT3G18680  --  has similar expression pattern (mutual information value=1.10015) with  --  AT3G20230
71 AT3G02060  --  has similar expression pattern (mutual information value=0.999347) with  --  AT3G18680  --  has similar expression pattern (mutual information value=0.851463) with  --  AT4G26670
72 AT3G02060  --  has similar expression pattern (mutual information value=0.999347) with  --  AT3G18680  --  has similar expression pattern (mutual information value=0.84553) with  --  ATRAB1A; ATRABD2B; RAB1A
73 AT3G02060  --  has similar expression pattern (mutual information value=0.999347) with  --  AT3G18680  --  has similar expression pattern (mutual information value=0.946708) with  --  emb2737; EMB64
74 AT3G02060  --  has similar expression pattern (mutual information value=0.832886) with  --  emb2738  --  has similar expression pattern (mutual information value=0.958627) with  --  EMB2279; EMB88
75 AT3G02060  --  has similar expression pattern (mutual information value=0.981601) with  --  FLN1  --  interacts with  --  FLN2
76 AT3G02060  --  has similar expression pattern (mutual information value=0.981601) with  --  FLN1  --  has similar expression pattern (mutual information value=0.818416) with  --  ATCAF1; CAF1
77 AT3G02060  --  has similar expression pattern (mutual information value=0.981601) with  --  FLN1  --  has similar expression pattern (mutual information value=0.943497) with  --  AT1G48460
78 AT3G02060  --  has similar expression pattern (mutual information value=0.981601) with  --  FLN1  --  has similar expression pattern (mutual information value=0.980285) with  --  MAP1B; MAP1C
79 AT3G02060  --  has similar expression pattern (mutual information value=0.981601) with  --  FLN1  --  has similar expression pattern (mutual information value=0.903732) with  --  BPG2
80 AT3G02060  --  has similar expression pattern (mutual information value=0.981601) with  --  FLN1  --  has similar expression pattern (mutual information value=0.81235) with  --  AT3G51870
81 AT3G02060  --  has similar expression pattern (mutual information value=0.981601) with  --  FLN1  --  has similar expression pattern (mutual information value=0.871) with  --  AT5G08400
82 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580  --  has similar expression pattern (mutual information value=0.834593) with  --  AT2G04360
83 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580  --  has similar expression pattern (mutual information value=1.02415) with  --  MRL7-L
84 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580  --  has similar expression pattern (mutual information value=1.17081) with  --  AT1G14030
85 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580  --  has similar expression pattern (mutual information value=0.812526) with  --  AT1G17100
86 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580  --  has similar expression pattern (mutual information value=0.800455) with  --  CDPK1A/CPK30
87 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580  --  has similar expression pattern (mutual information value=0.897107) with  --  ABCI14; TGD1
88 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580  --  has similar expression pattern (mutual information value=0.900498) with  --  emb2768
89 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580  --  has similar expression pattern (mutual information value=1.1353) with  --  BSM
90 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580  --  has similar expression pattern (mutual information value=1.06128) with  --  AT3G51140
91 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580  --  has similar expression pattern (mutual information value=0.964464) with  --  OVA2
92 AT3G02060  --  has similar expression pattern (mutual information value=0.944513) with  --  AT5G46580  --  has similar expression pattern (mutual information value=0.889463) with  --  PTAC15
93 AT3G02060  --  has similar expression pattern (mutual information value=0.880288) with  --  EMB2247  --  has similar expression pattern (mutual information value=0.994286) with  --  CPN60B; LEN1
94 AT3G02060  --  has similar expression pattern (mutual information value=0.880288) with  --  EMB2247  --  has similar expression pattern (mutual information value=0.875915) with  --  PDE318
95 AT3G02060  --  has similar expression pattern (mutual information value=0.880288) with  --  EMB2247  --  has similar expression pattern (mutual information value=0.821321) with  --  FAD6; FADC; SFD4
96 AT3G02060  --  has similar expression pattern (mutual information value=0.880288) with  --  EMB2247  --  has similar expression pattern (mutual information value=0.955899) with  --  APG3
97 AT3G02060  --  has similar expression pattern (mutual information value=0.880288) with  --  EMB2247  --  has product (in catalytic reaction)  --  L-Valyl-tRNA(Val)
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