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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G41960
Type: Protein GRN ID: np39233 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus: AT5G41960
Gene Expression (Affy ATH1 probeset): 249285_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080
3 AT5G41960  --  has similar expression pattern (mutual information value=0.88675) with  --  RNR2; RNR2A
4 AT5G41960  --  has similar expression pattern (mutual information value=0.859281) with  --  AT4G18975
5 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4
6 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH3
7 AT5G41960  --  has similar expression pattern (mutual information value=1.10368) with  --  FPS1
8 AT5G41960  --  has similar expression pattern (mutual information value=0.9444) with  --  ACLB-2
9 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B
10 AT5G41960  --  has similar expression pattern (mutual information value=0.866706) with  --  AT5G19340
11 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400
12 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=1.22452) with  --  AT2G38090
13 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.827878) with  --  AT2G41040
14 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.979777) with  --  GATA2
15 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.851764) with  --  AT1G23060
16 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.92229) with  --  AtHB23; HB23
17 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.879937) with  --  ATFUT6; FUT6
18 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.941504) with  --  AT1G74840
19 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.924811) with  --  AtENODL8; ENODL8
20 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.810415) with  --  AT1G19650
21 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=1.1034) with  --  BGAL5
22 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.917215) with  --  AT1G29160
23 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.864815) with  --  ACT8; FIZ1
24 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.815857) with  --  AT1G18910
25 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.857138) with  --  RCI2B
26 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.919435) with  --  AT3G04320
27 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.919435) with  --  AT3G04330
28 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.915209) with  --  ACT2; DER1; ENL2; FIZ2; LSR2
29 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.819618) with  --  AT3G12710
30 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.880365) with  --  TET6
31 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.902634) with  --  AT3G59370
32 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.894738) with  --  AT5G05790
33 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.912992) with  --  AtLOG7
34 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.801184) with  --  GASA4
35 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.981677) with  --  AT5G24580
36 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.805355) with  --  AT5G53920
37 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=1.12915) with  --  LNG1
38 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=0.854594) with  --  AT5G16990
39 AT5G41960  --  has similar expression pattern (mutual information value=0.952009) with  --  AT1G12080  --  has similar expression pattern (mutual information value=1.02665) with  --  AT1G77330
40 AT5G41960  --  has similar expression pattern (mutual information value=0.88675) with  --  RNR2; RNR2A  --  interacts with  --  ATCSN7; COP15; CSN7; FUS5
41 AT5G41960  --  has similar expression pattern (mutual information value=0.88675) with  --  RNR2; RNR2A  --  has similar expression pattern (mutual information value=0.959413) with  --  AtMC4; AtMCP2d; MC4; MCP2d
42 AT5G41960  --  has similar expression pattern (mutual information value=0.88675) with  --  RNR2; RNR2A  --  has similar expression pattern (mutual information value=0.850582) with  --  AT3G05920
43 AT5G41960  --  has similar expression pattern (mutual information value=0.88675) with  --  RNR2; RNR2A  --  has product (in catalytic reaction)  --  Thioredoxin
44 AT5G41960  --  has similar expression pattern (mutual information value=0.88675) with  --  RNR2; RNR2A  --  has product (in catalytic reaction)  --  Ribonucleoside diphosphate
45 AT5G41960  --  has similar expression pattern (mutual information value=0.859281) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.88864) with  --  AT3G03890
46 AT5G41960  --  has similar expression pattern (mutual information value=0.859281) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.876921) with  --  GPK1
47 AT5G41960  --  has similar expression pattern (mutual information value=0.859281) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.803776) with  --  AT4G13150
48 AT5G41960  --  has similar expression pattern (mutual information value=0.859281) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.991593) with  --  AT4G38020
49 AT5G41960  --  has similar expression pattern (mutual information value=0.859281) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.852962) with  --  GAD; GAD1
50 AT5G41960  --  has similar expression pattern (mutual information value=0.859281) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.913525) with  --  AT5G53940
51 AT5G41960  --  has similar expression pattern (mutual information value=0.859281) with  --  AT4G18975  --  has similar expression pattern (mutual information value=0.878709) with  --  AT5G27730
52 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.9719) with  --  ACLA-2
53 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.825984) with  --  ATPAP7; PAP7
54 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.839261) with  --  ATOCT6; OCT6
55 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.829324) with  --  BGLU35; TGG5
56 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.829324) with  --  BGLU34; TGG4
57 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.841103) with  --  AT1G06090
58 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.841103) with  --  AT1G06120
59 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.819272) with  --  ATHB20; HB20
60 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.87338) with  --  AT3G13650
61 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.984659) with  --  ATMSRB8; MSRB8
62 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.984659) with  --  ATMSRB7; MSRB7
63 AT5G41960  --  has similar expression pattern (mutual information value=0.962198) with  --  NSH4  --  has similar expression pattern (mutual information value=0.83996) with  --  AT4G35380
64 AT5G41960  --  has similar expression pattern (mutual information value=1.10368) with  --  FPS1  --  has similar expression pattern (mutual information value=0.836994) with  --  AT3G23090
65 AT5G41960  --  has similar expression pattern (mutual information value=1.10368) with  --  FPS1  --  has similar expression pattern (mutual information value=0.826589) with  --  ATGDI2; GDI2
66 AT5G41960  --  has similar expression pattern (mutual information value=1.10368) with  --  FPS1  --  has similar expression pattern (mutual information value=0.879374) with  --  AT5G17910
67 AT5G41960  --  has similar expression pattern (mutual information value=1.10368) with  --  FPS1  --  has similar expression pattern (mutual information value=0.800592) with  --  AT5G37790
68 AT5G41960  --  has similar expression pattern (mutual information value=1.10368) with  --  FPS1  --  has similar expression pattern (mutual information value=0.872624) with  --  ACAT2; EMB1276
69 AT5G41960  --  has similar expression pattern (mutual information value=1.10368) with  --  FPS1  --  has product (in catalytic reaction)  --  Geranyl diphosphate
70 AT5G41960  --  has similar expression pattern (mutual information value=0.9444) with  --  ACLB-2  --  has product (in catalytic reaction)  --  Citrate
71 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.861105) with  --  AT2G34910
72 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.921964) with  --  ZIP3
73 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.870253) with  --  AT1G52070
74 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.812231) with  --  AT1G64190
75 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.950691) with  --  AT1G80240
76 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.831732) with  --  AT1G33800
77 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.94891) with  --  BGLU21
78 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.94891) with  --  BGLU22
79 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.896094) with  --  ATPPC3; PPC3
80 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.815408) with  --  ADF8
81 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.930843) with  --  AT4G30170
82 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.929859) with  --  AT3G57190
83 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.859641) with  --  AT5G14150
84 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.843422) with  --  AT5G38930
85 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.843422) with  --  AT5G38940
86 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.881069) with  --  AT5G54370
87 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  has similar expression pattern (mutual information value=0.960208) with  --  GMD1
88 AT5G41960  --  has similar expression pattern (mutual information value=0.829029) with  --  BCCP2; CAC1-B  --  is regulated by  --  ASML1; ATWRI1; WRI; WRI1
89 AT5G41960  --  has similar expression pattern (mutual information value=0.866706) with  --  AT5G19340  --  has similar expression pattern (mutual information value=0.935078) with  --  AT2G04800
90 AT5G41960  --  has similar expression pattern (mutual information value=0.866706) with  --  AT5G19340  --  has similar expression pattern (mutual information value=0.935161) with  --  UPB1
91 AT5G41960  --  has similar expression pattern (mutual information value=0.866706) with  --  AT5G19340  --  has similar expression pattern (mutual information value=0.868018) with  --  AT3G16650
92 AT5G41960  --  has similar expression pattern (mutual information value=0.866706) with  --  AT5G19340  --  has similar expression pattern (mutual information value=0.803123) with  --  AT3G26760
93 AT5G41960  --  has similar expression pattern (mutual information value=0.866706) with  --  AT5G19340  --  has similar expression pattern (mutual information value=0.958377) with  --  AFB1
94 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.829098) with  --  AT1G09740
95 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.984159) with  --  KAT1
96 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.805949) with  --  AT1G48460
97 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.934211) with  --  EMB2654
98 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.939737) with  --  FLN2
99 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=1.15552) with  --  AT1G71460
100 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.8001) with  --  AT3G08000
101 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=1.15675) with  --  AT3G29230
102 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.80417) with  --  AT3G12210
103 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=1.14861) with  --  ATNUDT14; ATNUDX14; NUDX14
104 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.801916) with  --  AT3G48620
105 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.801916) with  --  AT3G44160
106 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.871) with  --  FLN1
107 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=1.03242) with  --  BPG2
108 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.86893) with  --  AT3G59840
109 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.89142) with  --  AT5G10910
110 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.818396) with  --  PR5K
111 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G39980
112 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.945381) with  --  AT5G39940
113 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.924842) with  --  EMB139; EMB506
114 AT5G41960  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.80118) with  --  AT4G14100
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