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Location:  Home > Details for node AT5G39980
Type: Protein GRN ID: np41884 Name:
Annotation: Tetratricopeptide repeat (TPR)-like superfamily protein
Gene Locus: AT5G39980
Gene Expression (Affy ATH1 probeset): 249436_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G39980  --  has similar expression pattern (mutual information value=0.955811) with  --  AT1G71460
3 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400
4 AT5G39980  --  has similar expression pattern (mutual information value=0.955811) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.860066) with  --  AT1G09740
5 AT5G39980  --  has similar expression pattern (mutual information value=0.955811) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.860939) with  --  CPZ; TRZ2
6 AT5G39980  --  has similar expression pattern (mutual information value=0.955811) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.817194) with  --  MRL7-L
7 AT5G39980  --  has similar expression pattern (mutual information value=0.955811) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.805126) with  --  AT1G28530
8 AT5G39980  --  has similar expression pattern (mutual information value=0.955811) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.823813) with  --  AT1G48460
9 AT5G39980  --  has similar expression pattern (mutual information value=0.955811) with  --  AT1G71460  --  has similar expression pattern (mutual information value=0.802223) with  --  AT4G27340
10 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.984159) with  --  KAT1
11 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.934211) with  --  EMB2654
12 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.939737) with  --  FLN2
13 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.807148) with  --  AT1G18910
14 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.8001) with  --  AT3G08000
15 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=1.15675) with  --  AT3G29230
16 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.80417) with  --  AT3G12210
17 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=1.14861) with  --  ATNUDT14; ATNUDX14; NUDX14
18 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=1.23797) with  --  AT4G38020
19 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.801916) with  --  AT3G48620
20 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.801916) with  --  AT3G44160
21 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.871) with  --  FLN1
22 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=1.03242) with  --  BPG2
23 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.86893) with  --  AT3G59840
24 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.89142) with  --  AT5G10910
25 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.803788) with  --  AT5G17910
26 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.818396) with  --  PR5K
27 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.945381) with  --  AT5G39940
28 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.924842) with  --  EMB139; EMB506
29 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.999409) with  --  AT5G41960
30 AT5G39980  --  has similar expression pattern (mutual information value=0.894703) with  --  AT5G08400  --  has similar expression pattern (mutual information value=0.80118) with  --  AT4G14100
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